Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39997076

Identifier: 39997076

GI number: 39997076

Start: 2168973

End: 2169647

Strand: Reverse

Name: 39997076

Synonym: GSU1978

Alternate gene names: NA

Gene position: 2169647-2168973 (Counterclockwise)

Preceding gene: 39997077

Following gene: 39997075

Centisome position: 56.88

GC content: 60.3

Gene sequence:

>675_bases
ATGCGATCGGTGAGTTGCACGAAACTGCTTGCCGTCTCTGTTCTGCTCGCGGTTACGGCGTTTTTAATCCATGGTCGTTC
CCAGGCAGTGACGGCGAACGGTTCGGGCGCGCCGTTGCGCTCTGAATTCGAGCGGGTGGCAGGCTGGAACCCGCTGGGCG
ATCAGCCTCTGGAACCCCGTGTTGTCGAAGAACTCAGGCTCGACGACTATCTTTACCGCAGTTTCATCCGTGACGGAGCC
GTGGTGACCCTCTACATCGGCTATTACCATACTGCCGGAAAAGTGGGGGCCGCCCACGATCCCCTCGTCTGCTTCAACGG
GCAGGGGTGGCGCATCACGGGGCGCAGTAAGGGGCAACTGAGCCTGGCCGGTTCACCCGAACTCCGGGTGAATTACTCGT
CCATGATCGTTGAGCGCGATGGCCAACGGGAACAGATCGTCTACTGGTTCCAGACGAACGGCAAGACCGCCGCCACTACC
TTGGCCCAGAAGGTTCACATGGTTCAGGACCGCCTGTTCGGCTCAGGTGAGAATAATGCCTTCGTGCGGATCAGTACGCC
GGTCGCCGGTGATTCAACCGCCCGTCCCCTGGAGCGTATCACGCATTTCGTCGAAGCGTTTTATCCCTCCTTCCACCGCT
ACGCGGCTGGGGCCGGTCCGTTGGAGACGAGATAA

Upstream 100 bases:

>100_bases
ACATCGATCTTGCCAAAGGGACCGCTCATACCGTCCTTGGACTGGCCCTGTTCGTGGTGTCGTTCGGCCTGTTTCTGCTG
ATCCGGAAGGGGTTGTCGCT

Downstream 100 bases:

>100_bases
TGATTGAACTGGTGCTGCTCATATCGCTCTTCATGGTGTTCTACGTGTATGGAGGATACCCGGTGCTGGCCGCAGCGCTC
GGTCTGGTCGCGGGGCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Methanolan Biosynthesis EpsI Protein

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRSVSCTKLLAVSVLLAVTAFLIHGRSQAVTANGSGAPLRSEFERVAGWNPLGDQPLEPRVVEELRLDDYLYRSFIRDGA
VVTLYIGYYHTAGKVGAAHDPLVCFNGQGWRITGRSKGQLSLAGSPELRVNYSSMIVERDGQREQIVYWFQTNGKTAATT
LAQKVHMVQDRLFGSGENNAFVRISTPVAGDSTARPLERITHFVEAFYPSFHRYAAGAGPLETR

Sequences:

>Translated_224_residues
MRSVSCTKLLAVSVLLAVTAFLIHGRSQAVTANGSGAPLRSEFERVAGWNPLGDQPLEPRVVEELRLDDYLYRSFIRDGA
VVTLYIGYYHTAGKVGAAHDPLVCFNGQGWRITGRSKGQLSLAGSPELRVNYSSMIVERDGQREQIVYWFQTNGKTAATT
LAQKVHMVQDRLFGSGENNAFVRISTPVAGDSTARPLERITHFVEAFYPSFHRYAAGAGPLETR
>Mature_224_residues
MRSVSCTKLLAVSVLLAVTAFLIHGRSQAVTANGSGAPLRSEFERVAGWNPLGDQPLEPRVVEELRLDDYLYRSFIRDGA
VVTLYIGYYHTAGKVGAAHDPLVCFNGQGWRITGRSKGQLSLAGSPELRVNYSSMIVERDGQREQIVYWFQTNGKTAATT
LAQKVHMVQDRLFGSGENNAFVRISTPVAGDSTARPLERITHFVEAFYPSFHRYAAGAGPLETR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24663; Mature: 24663

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVSCTKLLAVSVLLAVTAFLIHGRSQAVTANGSGAPLRSEFERVAGWNPLGDQPLEPR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCH
VVEELRLDDYLYRSFIRDGAVVTLYIGYYHTAGKVGAAHDPLVCFNGQGWRITGRSKGQL
HHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCEE
SLAGSPELRVNYSSMIVERDGQREQIVYWFQTNGKTAATTLAQKVHMVQDRLFGSGENNA
EECCCCCEEEEHHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCE
FVRISTPVAGDSTARPLERITHFVEAFYPSFHRYAAGAGPLETR
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRSVSCTKLLAVSVLLAVTAFLIHGRSQAVTANGSGAPLRSEFERVAGWNPLGDQPLEPR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCH
VVEELRLDDYLYRSFIRDGAVVTLYIGYYHTAGKVGAAHDPLVCFNGQGWRITGRSKGQL
HHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCEE
SLAGSPELRVNYSSMIVERDGQREQIVYWFQTNGKTAATTLAQKVHMVQDRLFGSGENNA
EECCCCCEEEEHHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCE
FVRISTPVAGDSTARPLERITHFVEAFYPSFHRYAAGAGPLETR
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA