| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997076
Identifier: 39997076
GI number: 39997076
Start: 2168973
End: 2169647
Strand: Reverse
Name: 39997076
Synonym: GSU1978
Alternate gene names: NA
Gene position: 2169647-2168973 (Counterclockwise)
Preceding gene: 39997077
Following gene: 39997075
Centisome position: 56.88
GC content: 60.3
Gene sequence:
>675_bases ATGCGATCGGTGAGTTGCACGAAACTGCTTGCCGTCTCTGTTCTGCTCGCGGTTACGGCGTTTTTAATCCATGGTCGTTC CCAGGCAGTGACGGCGAACGGTTCGGGCGCGCCGTTGCGCTCTGAATTCGAGCGGGTGGCAGGCTGGAACCCGCTGGGCG ATCAGCCTCTGGAACCCCGTGTTGTCGAAGAACTCAGGCTCGACGACTATCTTTACCGCAGTTTCATCCGTGACGGAGCC GTGGTGACCCTCTACATCGGCTATTACCATACTGCCGGAAAAGTGGGGGCCGCCCACGATCCCCTCGTCTGCTTCAACGG GCAGGGGTGGCGCATCACGGGGCGCAGTAAGGGGCAACTGAGCCTGGCCGGTTCACCCGAACTCCGGGTGAATTACTCGT CCATGATCGTTGAGCGCGATGGCCAACGGGAACAGATCGTCTACTGGTTCCAGACGAACGGCAAGACCGCCGCCACTACC TTGGCCCAGAAGGTTCACATGGTTCAGGACCGCCTGTTCGGCTCAGGTGAGAATAATGCCTTCGTGCGGATCAGTACGCC GGTCGCCGGTGATTCAACCGCCCGTCCCCTGGAGCGTATCACGCATTTCGTCGAAGCGTTTTATCCCTCCTTCCACCGCT ACGCGGCTGGGGCCGGTCCGTTGGAGACGAGATAA
Upstream 100 bases:
>100_bases ACATCGATCTTGCCAAAGGGACCGCTCATACCGTCCTTGGACTGGCCCTGTTCGTGGTGTCGTTCGGCCTGTTTCTGCTG ATCCGGAAGGGGTTGTCGCT
Downstream 100 bases:
>100_bases TGATTGAACTGGTGCTGCTCATATCGCTCTTCATGGTGTTCTACGTGTATGGAGGATACCCGGTGCTGGCCGCAGCGCTC GGTCTGGTCGCGGGGCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Methanolan Biosynthesis EpsI Protein
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MRSVSCTKLLAVSVLLAVTAFLIHGRSQAVTANGSGAPLRSEFERVAGWNPLGDQPLEPRVVEELRLDDYLYRSFIRDGA VVTLYIGYYHTAGKVGAAHDPLVCFNGQGWRITGRSKGQLSLAGSPELRVNYSSMIVERDGQREQIVYWFQTNGKTAATT LAQKVHMVQDRLFGSGENNAFVRISTPVAGDSTARPLERITHFVEAFYPSFHRYAAGAGPLETR
Sequences:
>Translated_224_residues MRSVSCTKLLAVSVLLAVTAFLIHGRSQAVTANGSGAPLRSEFERVAGWNPLGDQPLEPRVVEELRLDDYLYRSFIRDGA VVTLYIGYYHTAGKVGAAHDPLVCFNGQGWRITGRSKGQLSLAGSPELRVNYSSMIVERDGQREQIVYWFQTNGKTAATT LAQKVHMVQDRLFGSGENNAFVRISTPVAGDSTARPLERITHFVEAFYPSFHRYAAGAGPLETR >Mature_224_residues MRSVSCTKLLAVSVLLAVTAFLIHGRSQAVTANGSGAPLRSEFERVAGWNPLGDQPLEPRVVEELRLDDYLYRSFIRDGA VVTLYIGYYHTAGKVGAAHDPLVCFNGQGWRITGRSKGQLSLAGSPELRVNYSSMIVERDGQREQIVYWFQTNGKTAATT LAQKVHMVQDRLFGSGENNAFVRISTPVAGDSTARPLERITHFVEAFYPSFHRYAAGAGPLETR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24663; Mature: 24663
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSVSCTKLLAVSVLLAVTAFLIHGRSQAVTANGSGAPLRSEFERVAGWNPLGDQPLEPR CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCH VVEELRLDDYLYRSFIRDGAVVTLYIGYYHTAGKVGAAHDPLVCFNGQGWRITGRSKGQL HHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCEE SLAGSPELRVNYSSMIVERDGQREQIVYWFQTNGKTAATTLAQKVHMVQDRLFGSGENNA EECCCCCEEEEHHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCE FVRISTPVAGDSTARPLERITHFVEAFYPSFHRYAAGAGPLETR EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRSVSCTKLLAVSVLLAVTAFLIHGRSQAVTANGSGAPLRSEFERVAGWNPLGDQPLEPR CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCH VVEELRLDDYLYRSFIRDGAVVTLYIGYYHTAGKVGAAHDPLVCFNGQGWRITGRSKGQL HHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCEE SLAGSPELRVNYSSMIVERDGQREQIVYWFQTNGKTAATTLAQKVHMVQDRLFGSGENNA EECCCCCEEEEHHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCE FVRISTPVAGDSTARPLERITHFVEAFYPSFHRYAAGAGPLETR EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA