| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997062
Identifier: 39997062
GI number: 39997062
Start: 2153348
End: 2154430
Strand: Reverse
Name: 39997062
Synonym: GSU1964
Alternate gene names: NA
Gene position: 2154430-2153348 (Counterclockwise)
Preceding gene: 39997063
Following gene: 39997061
Centisome position: 56.49
GC content: 49.22
Gene sequence:
>1083_bases ATGACAGTATTTGTAATAGAATCGCCATTTCAGGTGATGAATGCCATAGAGGCGGTCCATCATTTCAAATTCAAAGACAA TGTCCTCATAGTATTGTTGTCAGGACTTTTCAGCAAGGAAAGCTATGAAAGAATTATCGACAAGAAACAGTGGAAGGAAG TCAGGTATATCCCTTTTCGCTATAAATTGACCAACAGTGATTTCGGACTTCATCCGCCGAAGAACGTCTATGAAAGGATG CAGGAGCTTTACTTGACGCTGGATCGATCAGTCAAGAAAAAGGTCATCAATAACATGTGCCGGTCGTTGGGCCGGGTTGA CAATCTTGTGTTGGGCAGTTACCGGCGGTATTACGACATTCATATGAGGCACATCGCCAACAATGTCGATCACAACAGAC TGTTCCTGATAGATGTGGGAACGGATACTCTCGAAATCGGCAGGCAGAGGATTGAAGAACACAATGCCGGCTCCGGTGTC CTCGGGGATGAACCGGCTAAATCGTTGAAAAGTATGCTTCGCGACAAGTTGGTGGAGTGGGACGGGACCGGTGTGGACTC GCTTACCTTTTTCACCAGCTATGATTTCGAGGTATCCGACCCGGATCGAGTCATCAAGAACGACTATCGTTATTTCAAGT CGCTCGCCGATAGGGCGGCAGTCTCCGACTGTGTCTGGTTCATCGCCCAGCCGCTGGTGGAGCAGGAATACCTGACCCAT GAAGTCTACGTCCGTTACCTGGCAAAGGTGAAGCAGTATTTCTCCGGTCGACCGGTCTTCTATATTCCCCATCCGCGTGA GTCGGGCAGGTATATCGACTTGGCACGGGATGAGTTCGGCTTTGAAACGAAACGATTTGACGTTCCGGTCGAGTACGCCG TTACCGTAGGCGGCAGCCGGCCCCAGTGCATCGCATCATTCTTCTCCTCAGCATTGGAGAATTTTGCCGTAATTTTCGGG AACCGTATCGATATCAAGGCGTTTTACCTGCATGTTTCCGATCTCCTCAAGAACCATGAGAGTGTTGACGAGGTGTATTC GCTTTACGTGTCAAAGGGGATGGACATCGAGGTCGTTTCCTGA
Upstream 100 bases:
>100_bases CGAAGAACTGTTGGGACAACGTGACATATCTGAAACAATTCCCGGGCTCGGCAACAACTGCCTGATTGAAGAAGGATCCC CACATGCACCGGAGCACGTT
Downstream 100 bases:
>100_bases TGCCGGGCGCATTGCCTGCCGGCCGGGACGGAGATTGAGGCATGGGCCTGGGTCGCCAGATATTCAAACATACCGCCATC TACAGTGCGGCGACCATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTVFVIESPFQVMNAIEAVHHFKFKDNVLIVLLSGLFSKESYERIIDKKQWKEVRYIPFRYKLTNSDFGLHPPKNVYERM QELYLTLDRSVKKKVINNMCRSLGRVDNLVLGSYRRYYDIHMRHIANNVDHNRLFLIDVGTDTLEIGRQRIEEHNAGSGV LGDEPAKSLKSMLRDKLVEWDGTGVDSLTFFTSYDFEVSDPDRVIKNDYRYFKSLADRAAVSDCVWFIAQPLVEQEYLTH EVYVRYLAKVKQYFSGRPVFYIPHPRESGRYIDLARDEFGFETKRFDVPVEYAVTVGGSRPQCIASFFSSALENFAVIFG NRIDIKAFYLHVSDLLKNHESVDEVYSLYVSKGMDIEVVS
Sequences:
>Translated_360_residues MTVFVIESPFQVMNAIEAVHHFKFKDNVLIVLLSGLFSKESYERIIDKKQWKEVRYIPFRYKLTNSDFGLHPPKNVYERM QELYLTLDRSVKKKVINNMCRSLGRVDNLVLGSYRRYYDIHMRHIANNVDHNRLFLIDVGTDTLEIGRQRIEEHNAGSGV LGDEPAKSLKSMLRDKLVEWDGTGVDSLTFFTSYDFEVSDPDRVIKNDYRYFKSLADRAAVSDCVWFIAQPLVEQEYLTH EVYVRYLAKVKQYFSGRPVFYIPHPRESGRYIDLARDEFGFETKRFDVPVEYAVTVGGSRPQCIASFFSSALENFAVIFG NRIDIKAFYLHVSDLLKNHESVDEVYSLYVSKGMDIEVVS >Mature_359_residues TVFVIESPFQVMNAIEAVHHFKFKDNVLIVLLSGLFSKESYERIIDKKQWKEVRYIPFRYKLTNSDFGLHPPKNVYERMQ ELYLTLDRSVKKKVINNMCRSLGRVDNLVLGSYRRYYDIHMRHIANNVDHNRLFLIDVGTDTLEIGRQRIEEHNAGSGVL GDEPAKSLKSMLRDKLVEWDGTGVDSLTFFTSYDFEVSDPDRVIKNDYRYFKSLADRAAVSDCVWFIAQPLVEQEYLTHE VYVRYLAKVKQYFSGRPVFYIPHPRESGRYIDLARDEFGFETKRFDVPVEYAVTVGGSRPQCIASFFSSALENFAVIFGN RIDIKAFYLHVSDLLKNHESVDEVYSLYVSKGMDIEVVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41909; Mature: 41778
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFVIESPFQVMNAIEAVHHFKFKDNVLIVLLSGLFSKESYERIIDKKQWKEVRYIPFR CEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHEECEEE YKLTNSDFGLHPPKNVYERMQELYLTLDRSVKKKVINNMCRSLGRVDNLVLGSYRRYYDI EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMRHIANNVDHNRLFLIDVGTDTLEIGRQRIEEHNAGSGVLGDEPAKSLKSMLRDKLVEW HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC DGTGVDSLTFFTSYDFEVSDPDRVIKNDYRYFKSLADRAAVSDCVWFIAQPLVEQEYLTH CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVYVRYLAKVKQYFSGRPVFYIPHPRESGRYIDLARDEFGFETKRFDVPVEYAVTVGGSR HHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECHHCCCCCEEECCCEEEEEEECCCC PQCIASFFSSALENFAVIFGNRIDIKAFYLHVSDLLKNHESVDEVYSLYVSKGMDIEVVS HHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure TVFVIESPFQVMNAIEAVHHFKFKDNVLIVLLSGLFSKESYERIIDKKQWKEVRYIPFR EEEEECCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHEECEEE YKLTNSDFGLHPPKNVYERMQELYLTLDRSVKKKVINNMCRSLGRVDNLVLGSYRRYYDI EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMRHIANNVDHNRLFLIDVGTDTLEIGRQRIEEHNAGSGVLGDEPAKSLKSMLRDKLVEW HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC DGTGVDSLTFFTSYDFEVSDPDRVIKNDYRYFKSLADRAAVSDCVWFIAQPLVEQEYLTH CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVYVRYLAKVKQYFSGRPVFYIPHPRESGRYIDLARDEFGFETKRFDVPVEYAVTVGGSR HHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECHHCCCCCEEECCCEEEEEEECCCC PQCIASFFSSALENFAVIFGNRIDIKAFYLHVSDLLKNHESVDEVYSLYVSKGMDIEVVS HHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA