| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997057
Identifier: 39997057
GI number: 39997057
Start: 2148200
End: 2149210
Strand: Reverse
Name: 39997057
Synonym: GSU1959
Alternate gene names: NA
Gene position: 2149210-2148200 (Counterclockwise)
Preceding gene: 39997058
Following gene: 39997056
Centisome position: 56.35
GC content: 56.78
Gene sequence:
>1011_bases GTGTGGGCGCACTGTAGCGCCATTGCCCGGACCATGGTCTACCCCAGCTTCTTTTGCAGCGGTGACTGGTTAAAGGTTGC GGCGGAGAATCTGTGCCCGGGGGACGAAGCGTATATCCTTCTGGCCAAAGATGCCGACGACATCCGGGGGGTGCTCCCCC TGGTCAGAAAGCGCAACGCCCTCGGAGGTACCGACCTGCACTACCTGGGCTCGGATTTTTATCCCGATCCGCTTGGCCTG ATCTGTTCGCCTGCCGATCGGGCCGATTGTGCCGCTGCCCTGAGAAACCATCTACTCAATGCCCCCGATTGGGACCGATT GATACTGGACTTTCTGCTGGAGGACGAACCGGCTGATTGGACTCTGCCCGGCAAGCCGGTTTCAGTGGCGCCGTTTAAAG TGCTGCCACGGGACTTTTCCGAGCTGCTGGGAGAGTTCAAGAAGAAAAAGCGCTACAACCTGAGAGCGATGGTGAAAAAG CTCCTTGATGCCGGTGGAGAGCTTGCTGCTTCTTCGGGGCCGGAATCGAACATAGCGTATCTGGACGCCTTGTTTTTCCT GCATGAGAAAAGGGCGAGCGAAAGGTCGCTGGACAGCAGCTTCACTGGACCGAGGGTGCAATCGCTCCACCGAGCCCTTG TTGCTGCGTCGGATAATGTGAGGTTTTTCGGACTCAGGCTCAATGGGCAGATGATAGCTGTGATCTACGGCTTCGAGTTC TGCAATCGCTTTTTCTACTACCAGGTGGCCCACGACCCGGACCATGGCCACCTCAGCCCGGGGACGGTGCTGCTCTATCT CGTGATTGAAGCCTGTTGCGTCAACGGACTGACGGAATTCAACTTCCTCCAGGGAGATGAAACCTATAAAGGCATCTGGA CCAACGATTCGAGGATACTCTATCGCTGCGTACTCAATCGAAGCACGTGGCGCTCCCGTGTGTTCAGCGCCGTGGAGGAA TCCAGAGGTTACGTCAAGCGGGCAATGGGGTTGATGTCTCGTGGGAATTAA
Upstream 100 bases:
>100_bases AGACGATGTGGCGTAATTCTCTGTGCAACAGCACGCCGGACAGAATCATATGAAACCGGCTTTTACCGTAGAACGTTTCG ACGGGAGCAATCCGCATGAG
Downstream 100 bases:
>100_bases GACTCGGATAAGCAGACACTTTTTCCCTGATGCCGTCGCTGCCGCGGCTATCCGCCGCTTTCCCCCGGCATCAGGGCTCG TGCTGATGTACCACGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MWAHCSAIARTMVYPSFFCSGDWLKVAAENLCPGDEAYILLAKDADDIRGVLPLVRKRNALGGTDLHYLGSDFYPDPLGL ICSPADRADCAAALRNHLLNAPDWDRLILDFLLEDEPADWTLPGKPVSVAPFKVLPRDFSELLGEFKKKKRYNLRAMVKK LLDAGGELAASSGPESNIAYLDALFFLHEKRASERSLDSSFTGPRVQSLHRALVAASDNVRFFGLRLNGQMIAVIYGFEF CNRFFYYQVAHDPDHGHLSPGTVLLYLVIEACCVNGLTEFNFLQGDETYKGIWTNDSRILYRCVLNRSTWRSRVFSAVEE SRGYVKRAMGLMSRGN
Sequences:
>Translated_336_residues MWAHCSAIARTMVYPSFFCSGDWLKVAAENLCPGDEAYILLAKDADDIRGVLPLVRKRNALGGTDLHYLGSDFYPDPLGL ICSPADRADCAAALRNHLLNAPDWDRLILDFLLEDEPADWTLPGKPVSVAPFKVLPRDFSELLGEFKKKKRYNLRAMVKK LLDAGGELAASSGPESNIAYLDALFFLHEKRASERSLDSSFTGPRVQSLHRALVAASDNVRFFGLRLNGQMIAVIYGFEF CNRFFYYQVAHDPDHGHLSPGTVLLYLVIEACCVNGLTEFNFLQGDETYKGIWTNDSRILYRCVLNRSTWRSRVFSAVEE SRGYVKRAMGLMSRGN >Mature_336_residues MWAHCSAIARTMVYPSFFCSGDWLKVAAENLCPGDEAYILLAKDADDIRGVLPLVRKRNALGGTDLHYLGSDFYPDPLGL ICSPADRADCAAALRNHLLNAPDWDRLILDFLLEDEPADWTLPGKPVSVAPFKVLPRDFSELLGEFKKKKRYNLRAMVKK LLDAGGELAASSGPESNIAYLDALFFLHEKRASERSLDSSFTGPRVQSLHRALVAASDNVRFFGLRLNGQMIAVIYGFEF CNRFFYYQVAHDPDHGHLSPGTVLLYLVIEACCVNGLTEFNFLQGDETYKGIWTNDSRILYRCVLNRSTWRSRVFSAVEE SRGYVKRAMGLMSRGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37707; Mature: 37707
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWAHCSAIARTMVYPSFFCSGDWLKVAAENLCPGDEAYILLAKDADDIRGVLPLVRKRNA CCCHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCC LGGTDLHYLGSDFYPDPLGLICSPADRADCAAALRNHLLNAPDWDRLILDFLLEDEPADW CCCCCHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC TLPGKPVSVAPFKVLPRDFSELLGEFKKKKRYNLRAMVKKLLDAGGELAASSGPESNIAY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHH LDALFFLHEKRASERSLDSSFTGPRVQSLHRALVAASDNVRFFGLRLNGQMIAVIYGFEF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEECHHH CNRFFYYQVAHDPDHGHLSPGTVLLYLVIEACCVNGLTEFNFLQGDETYKGIWTNDSRIL HHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEECCCCEE YRCVLNRSTWRSRVFSAVEESRGYVKRAMGLMSRGN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWAHCSAIARTMVYPSFFCSGDWLKVAAENLCPGDEAYILLAKDADDIRGVLPLVRKRNA CCCHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCC LGGTDLHYLGSDFYPDPLGLICSPADRADCAAALRNHLLNAPDWDRLILDFLLEDEPADW CCCCCHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC TLPGKPVSVAPFKVLPRDFSELLGEFKKKKRYNLRAMVKKLLDAGGELAASSGPESNIAY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHH LDALFFLHEKRASERSLDSSFTGPRVQSLHRALVAASDNVRFFGLRLNGQMIAVIYGFEF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEECHHH CNRFFYYQVAHDPDHGHLSPGTVLLYLVIEACCVNGLTEFNFLQGDETYKGIWTNDSRIL HHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEECCCCEE YRCVLNRSTWRSRVFSAVEESRGYVKRAMGLMSRGN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA