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The map label for this gene is 39997056

Identifier: 39997056

GI number: 39997056

Start: 2147230

End: 2148114

Strand: Reverse

Name: 39997056

Synonym: GSU1958

Alternate gene names: NA

Gene position: 2148114-2147230 (Counterclockwise)

Preceding gene: 39997057

Following gene: 39997055

Centisome position: 56.32

GC content: 55.93

Gene sequence:

>885_bases
ATGTACCACGAGGTGTTGCCTGACGATATTGCCTTGCCCGCGTGGACGGTCGTCCGGGAGTCTGATTTCCATCGGCAAAT
GCAATGCTTGGCAACGCATTTCGATGTCGTGTCTCTTGACGAGGCCGTGGACCGGGTTTCCGGAAAGGCTGCGTCAACGC
GGCCATTTGCCGTTGTGACGTTTGATGACGGCTACCAAGGGAATGCGCGTACCGTGTTGCCGATAATGGAGCGGATGGGG
CTTCCCTTTACCGTTTATGCGGCAACCAGGGCAATCGTCGAGAATGATCTCTACTGGTACGACCGGGTCATAAGCGCACT
GGCCGTCAATAGGGAGATACGGGTAACGGTGAAGGTGAATGGCACCCCGGAGAGCTACACAATCCCTTCTTCCGGAGAAG
ATGGTCGCTGGGTGCATGTGCAGAGGCTCCTGAGCCGCATGAAGCTCATGCCGGCGGCAGAGCGGGACGCGACGGCAAGC
GAAATTGCCGCCGACCTCAGCTTGTCGGACTCGCCCTTGAAGATGTTGACCGAGGAGGAGTTACGGCTGCTTTCTGCATC
GAGTTGCGTCACTATTGGCTGTCATACCCACGGTCATGAACTGCTCGATCGGATCAGCCCCCGTGAGGCGGGCGAGACGC
TACGTCTTTCAAGCGACCTGCTCACGCGTATCACGGGAACGCATCCTCGACATTTTGCCTACCCCAACGGCAACGTTAAT
CAGGTTGTACGCGGCATTGTTCAACAGTCTGGATTTGAAACCGCTGTCACAACTGCATCAGGCTTATGGTCGGGAGAGGT
GAGCATGATGGAGATTCCGAGAGTTGGCGTCGGACGATTCGAAACTATTACCAGTTTTAAAGCACTCATCTCACGATGGG
TGTAA

Upstream 100 bases:

>100_bases
TCTCGTGGGAATTAAGACTCGGATAAGCAGACACTTTTTCCCTGATGCCGTCGCTGCCGCGGCTATCCGCCGCTTTCCCC
CGGCATCAGGGCTCGTGCTG

Downstream 100 bases:

>100_bases
TATAGATTGATAGAGTTGATACGATGAAAATTGCGTATGTTATAGATTACTTGTACAGCGTAAACGGAGGGACTGAACGA
CAGCTCTATATGCTCATAGA

Product: polysaccharide deacetylase domain-containing protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase Protein; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Protein Pda4E; Polysaccharide Deacetylase Est4A; Polysaccharide Deacetylase Domain-Containing Protein; Glycosyl Transferase Family Polysaccharide Deacetylase

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MYHEVLPDDIALPAWTVVRESDFHRQMQCLATHFDVVSLDEAVDRVSGKAASTRPFAVVTFDDGYQGNARTVLPIMERMG
LPFTVYAATRAIVENDLYWYDRVISALAVNREIRVTVKVNGTPESYTIPSSGEDGRWVHVQRLLSRMKLMPAAERDATAS
EIAADLSLSDSPLKMLTEEELRLLSASSCVTIGCHTHGHELLDRISPREAGETLRLSSDLLTRITGTHPRHFAYPNGNVN
QVVRGIVQQSGFETAVTTASGLWSGEVSMMEIPRVGVGRFETITSFKALISRWV

Sequences:

>Translated_294_residues
MYHEVLPDDIALPAWTVVRESDFHRQMQCLATHFDVVSLDEAVDRVSGKAASTRPFAVVTFDDGYQGNARTVLPIMERMG
LPFTVYAATRAIVENDLYWYDRVISALAVNREIRVTVKVNGTPESYTIPSSGEDGRWVHVQRLLSRMKLMPAAERDATAS
EIAADLSLSDSPLKMLTEEELRLLSASSCVTIGCHTHGHELLDRISPREAGETLRLSSDLLTRITGTHPRHFAYPNGNVN
QVVRGIVQQSGFETAVTTASGLWSGEVSMMEIPRVGVGRFETITSFKALISRWV
>Mature_294_residues
MYHEVLPDDIALPAWTVVRESDFHRQMQCLATHFDVVSLDEAVDRVSGKAASTRPFAVVTFDDGYQGNARTVLPIMERMG
LPFTVYAATRAIVENDLYWYDRVISALAVNREIRVTVKVNGTPESYTIPSSGEDGRWVHVQRLLSRMKLMPAAERDATAS
EIAADLSLSDSPLKMLTEEELRLLSASSCVTIGCHTHGHELLDRISPREAGETLRLSSDLLTRITGTHPRHFAYPNGNVN
QVVRGIVQQSGFETAVTTASGLWSGEVSMMEIPRVGVGRFETITSFKALISRWV

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32619; Mature: 32619

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHEVLPDDIALPAWTVVRESDFHRQMQCLATHFDVVSLDEAVDRVSGKAASTRPFAVVT
CCCCCCCCCCCCCCEEEHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEE
FDDGYQGNARTVLPIMERMGLPFTVYAATRAIVENDLYWYDRVISALAVNREIRVTVKVN
ECCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEC
GTPESYTIPSSGEDGRWVHVQRLLSRMKLMPAAERDATASEIAADLSLSDSPLKMLTEEE
CCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH
LRLLSASSCVTIGCHTHGHELLDRISPREAGETLRLSSDLLTRITGTHPRHFAYPNGNVN
HHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCEEECCCCCHH
QVVRGIVQQSGFETAVTTASGLWSGEVSMMEIPRVGVGRFETITSFKALISRWV
HHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYHEVLPDDIALPAWTVVRESDFHRQMQCLATHFDVVSLDEAVDRVSGKAASTRPFAVVT
CCCCCCCCCCCCCCEEEHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEE
FDDGYQGNARTVLPIMERMGLPFTVYAATRAIVENDLYWYDRVISALAVNREIRVTVKVN
ECCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEC
GTPESYTIPSSGEDGRWVHVQRLLSRMKLMPAAERDATASEIAADLSLSDSPLKMLTEEE
CCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH
LRLLSASSCVTIGCHTHGHELLDRISPREAGETLRLSSDLLTRITGTHPRHFAYPNGNVN
HHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCCCEEECCCCCHH
QVVRGIVQQSGFETAVTTASGLWSGEVSMMEIPRVGVGRFETITSFKALISRWV
HHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA