| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is capK [H]
Identifier: 39997053
GI number: 39997053
Start: 2144092
End: 2145453
Strand: Reverse
Name: capK [H]
Synonym: GSU1955
Alternate gene names: 39997053
Gene position: 2145453-2144092 (Counterclockwise)
Preceding gene: 39997054
Following gene: 39997052
Centisome position: 56.25
GC content: 53.82
Gene sequence:
>1362_bases ATGATGGCGCTAAATGGAAATGGATTGTCATGGCTTAGACGTGCTGTGTTCGAGCCTCTCTATTATTTGAGGGCTGGCAG TCCATTTCTGGACTACTGGATAACCCTTGAACAGACGCAGTATCTGCCTGAAACGGTGCTGCGTGAAAGGCAACGGCGAA GATTGCGTGATCTTCTCCGGTATGCTTGGGAAAACAACGCATTTTACCGCTCCAGATTCGAGAGTGCCGGCGTAACGCCC GGCATGCTGGACACTGATGACTGTATTGCAAAAATTCCGATACTTACCAAGGCTGACATTCGCTCTCATACAGCCGATAT GATCAGCCGCGGATTTGACCGTGGGGAGTTGCTCAATTTCAAGACCGGCGGCTCAACGGGCAAATCGCTCGATATCTATG TTACCGAAGAGTGCAGTGAGTTGAGAAACTCCTGCGCGCGGCGTCACGACCTCTGGACCGGCTGGAAGTCGGGGGAGCCG ATTGCAGCCGTGTGGGGTAATCCCTATCTGCCGCACGGTGTGAAACAGAAACTCAGGGATTGGCTCGTTTCTCCGATGAT CTACCTGGATACCATGTGCATATCGGAAGAGGCGATCGTGCGCTTTGCCGACGAATGGAAGCGGGTCCGTCCTACGTTGT TGTTCGGGCACGCCCATTCCATCTATGTACTGGCTCAGTACGTTAGAGACCTGAAACTTTCCGGCATACGTCCGACTGGA ATTCTGTCGACGTCGATGATGCTTATGCCCCATGAACGCAGGACCATTGAGTCGGTGTTCGGCATCAAGGTGACGGACCG CTACGGGTGTGAGGAAGTCAGCTTGATCGCCTCCGAGTGTGAGAAGCACGAGGGGATGCATCTGAATATCGAGCACCTTT ATATCGAGTTCGTTCGCGATGACGGCAGCCCTGCGGCCTCCGGAGAACCGGGTGCTATCGTTGTGACCGACCTGATGAAT CGGGCAATGCCGTTTATCCGCTATCGGGTTGAGGATGTCGGAGTGCCGACAGATAGAAAATGCAGTTGTGGTCGGGGACT TCCTCTCATGGAGAGCGTTACCGGGAGGGTGGCCGATTTCCTGGTGAAGAGCGACGGGTCGCGAGTGGCGGGGGTGTCAT TGATCGAAAACACCCTGACGAAGATTCCGGGGATCGATCAGATGCAACTTGTGCAGGAGGCTGTAGATTCGCTCGTTGTC AGGGTGGTGCCCGGCGCTGAGTTCAATGATGCTACACGGCGTGAACTACATGACTACTTCAAGGAGCTTTTTGGCGGACA GACAAAGATAGAAGTCACGGCCGTCGAAGCCATCCTGCCTGAAGCTTCAGGAAAGTATCGGTTTTCAATATGCAGGATAT GA
Upstream 100 bases:
>100_bases TATCCACTTGGATATAATTGGCAAAAAAATAAATAAACAGTTGGCGAGGATGGTTACTCAATAACGGGATGGTTGATAAC TTGATGCGGTGGCTAGCTCT
Downstream 100 bases:
>100_bases CATTAGACCGCCGGTCGGCCATTGGGCCGAGTGGGGAATATACGGACAACCGTCCGGTCGAATACCCGTATGTTGGTAAA ACGCTGCTGTTGCTGTTCTG
Product: capK related-protein
Products: AMP; Phenylacetyl-CoA; Diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MMALNGNGLSWLRRAVFEPLYYLRAGSPFLDYWITLEQTQYLPETVLRERQRRRLRDLLRYAWENNAFYRSRFESAGVTP GMLDTDDCIAKIPILTKADIRSHTADMISRGFDRGELLNFKTGGSTGKSLDIYVTEECSELRNSCARRHDLWTGWKSGEP IAAVWGNPYLPHGVKQKLRDWLVSPMIYLDTMCISEEAIVRFADEWKRVRPTLLFGHAHSIYVLAQYVRDLKLSGIRPTG ILSTSMMLMPHERRTIESVFGIKVTDRYGCEEVSLIASECEKHEGMHLNIEHLYIEFVRDDGSPAASGEPGAIVVTDLMN RAMPFIRYRVEDVGVPTDRKCSCGRGLPLMESVTGRVADFLVKSDGSRVAGVSLIENTLTKIPGIDQMQLVQEAVDSLVV RVVPGAEFNDATRRELHDYFKELFGGQTKIEVTAVEAILPEASGKYRFSICRI
Sequences:
>Translated_453_residues MMALNGNGLSWLRRAVFEPLYYLRAGSPFLDYWITLEQTQYLPETVLRERQRRRLRDLLRYAWENNAFYRSRFESAGVTP GMLDTDDCIAKIPILTKADIRSHTADMISRGFDRGELLNFKTGGSTGKSLDIYVTEECSELRNSCARRHDLWTGWKSGEP IAAVWGNPYLPHGVKQKLRDWLVSPMIYLDTMCISEEAIVRFADEWKRVRPTLLFGHAHSIYVLAQYVRDLKLSGIRPTG ILSTSMMLMPHERRTIESVFGIKVTDRYGCEEVSLIASECEKHEGMHLNIEHLYIEFVRDDGSPAASGEPGAIVVTDLMN RAMPFIRYRVEDVGVPTDRKCSCGRGLPLMESVTGRVADFLVKSDGSRVAGVSLIENTLTKIPGIDQMQLVQEAVDSLVV RVVPGAEFNDATRRELHDYFKELFGGQTKIEVTAVEAILPEASGKYRFSICRI >Mature_453_residues MMALNGNGLSWLRRAVFEPLYYLRAGSPFLDYWITLEQTQYLPETVLRERQRRRLRDLLRYAWENNAFYRSRFESAGVTP GMLDTDDCIAKIPILTKADIRSHTADMISRGFDRGELLNFKTGGSTGKSLDIYVTEECSELRNSCARRHDLWTGWKSGEP IAAVWGNPYLPHGVKQKLRDWLVSPMIYLDTMCISEEAIVRFADEWKRVRPTLLFGHAHSIYVLAQYVRDLKLSGIRPTG ILSTSMMLMPHERRTIESVFGIKVTDRYGCEEVSLIASECEKHEGMHLNIEHLYIEFVRDDGSPAASGEPGAIVVTDLMN RAMPFIRYRVEDVGVPTDRKCSCGRGLPLMESVTGRVADFLVKSDGSRVAGVSLIENTLTKIPGIDQMQLVQEAVDSLVV RVVPGAEFNDATRRELHDYFKELFGGQTKIEVTAVEAILPEASGKYRFSICRI
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.2.1.30 [C]
Molecular weight: Translated: 51330; Mature: 51330
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMALNGNGLSWLRRAVFEPLYYLRAGSPFLDYWITLEQTQYLPETVLRERQRRRLRDLLR CEEECCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHH YAWENNAFYRSRFESAGVTPGMLDTDDCIAKIPILTKADIRSHTADMISRGFDRGELLNF HHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEE KTGGSTGKSLDIYVTEECSELRNSCARRHDLWTGWKSGEPIAAVWGNPYLPHGVKQKLRD ECCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHH WLVSPMIYLDTMCISEEAIVRFADEWKRVRPTLLFGHAHSIYVLAQYVRDLKLSGIRPTG HHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCC ILSTSMMLMPHERRTIESVFGIKVTDRYGCEEVSLIASECEKHEGMHLNIEHLYIEFVRD HHHHHHEECCCHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCCCCEEEHHHEEEEEEEC DGSPAASGEPGAIVVTDLMNRAMPFIRYRVEDVGVPTDRKCSCGRGLPLMESVTGRVADF CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH LVKSDGSRVAGVSLIENTLTKIPGIDQMQLVQEAVDSLVVRVVPGAEFNDATRRELHDYF HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH KELFGGQTKIEVTAVEAILPEASGKYRFSICRI HHHHCCCCEEEEEEEHHHCCCCCCCEEEEEECC >Mature Secondary Structure MMALNGNGLSWLRRAVFEPLYYLRAGSPFLDYWITLEQTQYLPETVLRERQRRRLRDLLR CEEECCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHH YAWENNAFYRSRFESAGVTPGMLDTDDCIAKIPILTKADIRSHTADMISRGFDRGELLNF HHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEE KTGGSTGKSLDIYVTEECSELRNSCARRHDLWTGWKSGEPIAAVWGNPYLPHGVKQKLRD ECCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHH WLVSPMIYLDTMCISEEAIVRFADEWKRVRPTLLFGHAHSIYVLAQYVRDLKLSGIRPTG HHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCC ILSTSMMLMPHERRTIESVFGIKVTDRYGCEEVSLIASECEKHEGMHLNIEHLYIEFVRD HHHHHHEECCCHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCCCCEEEHHHEEEEEEEC DGSPAASGEPGAIVVTDLMNRAMPFIRYRVEDVGVPTDRKCSCGRGLPLMESVTGRVADF CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH LVKSDGSRVAGVSLIENTLTKIPGIDQMQLVQEAVDSLVVRVVPGAEFNDATRRELHDYF HHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHH KELFGGQTKIEVTAVEAILPEASGKYRFSICRI HHHHCCCCEEEEEEEHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; Coenzyme A; Phenylacetic acid [C]
Specific reaction: ATP + Coenzyme A + Phenylacetic acid --> AMP + Phenylacetyl-CoA + Diphosphate [C]
General reaction: Forming of carbon sulfur bond [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]