| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997029
Identifier: 39997029
GI number: 39997029
Start: 2111555
End: 2112328
Strand: Reverse
Name: 39997029
Synonym: GSU1931
Alternate gene names: NA
Gene position: 2112328-2111555 (Counterclockwise)
Preceding gene: 39997030
Following gene: 39997028
Centisome position: 55.38
GC content: 57.49
Gene sequence:
>774_bases GTGACGGTCCTGTTTTTTCTTGCTCTGGATACCGACGCGGAGGTCCACGGGAGTGCGAGAAAGCGGTTGAGAGGCGTGCC GTTGGCCGTCCTGGCCGATGCTGTGGCGTGTCGCACCCTTCACCCCCGCGTTCTGGATGCCCTTGCACGTCTCCACTACC GGTACGGGGAATTGGCCACCCAGATCGCCGTCCACCCCAATTGCGACGACGGTACCCGTGCCTTTCTGGCAGAACGGGGG ATTGCCGCGGCCGTGGGAGTGACGACCGTACACCCTGTGCATACTACGGAGCACCCGCCGCAGGATGAAGTGCCCGCCGA AGAGGATGATGAACCGGTGGACGAGGAGAGTGAGCAGTTCAAGAGCAAGTATCAACTCGCCCAGGTGATGGGGGTTGCCG AGAAGATCAAGATAGCCCAGACCGGCGACAAGGAATGGAGGATGATTCTCATCAAGGACTCCAATAAGCTCGTATCCGGG ACTGTTATCAGAAACCCGCGCATCACCGAGTCGGAAGTCCTTGCCATTGTCAAGTCATCGATCCAGAACGATGAAATCCT CAGAGTCGTCTGCGCGAGCAAGGAATGGCTCAAGAATTACCAGATTCGCAAGGCACTGGTCGAGAATCCCAAAACCCCGA TCCATTCCGCACTTCGCCTGCTGACGACCCTTACCGAGAAGGACCTGTCTCATCTGGCCAAGAGCAAGAACATCCAGACG GTCCTCTCAACCCAAGCACGGAAGCTGCTTATTGCAAAAAAGGAGAAGCGGTAG
Upstream 100 bases:
>100_bases AATATCGTCCGCCGCCGCGGCACTTCTGCGCAGGGATGCACCCCGGGAGGAAAAACTCAGGTTCACCGCCGAAGAGCATG CGCTTCCCGCTGCCGAGGAG
Downstream 100 bases:
>100_bases TGGGGGCTTACGCCGCCTGCCACGCCCTTTCCGGAGATTCACATGGCCCTGCTCAACAGCGCGAAACGCGAAATCAACGC CAAGATCGTCTTCTTCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTVLFFLALDTDAEVHGSARKRLRGVPLAVLADAVACRTLHPRVLDALARLHYRYGELATQIAVHPNCDDGTRAFLAERG IAAAVGVTTVHPVHTTEHPPQDEVPAEEDDEPVDEESEQFKSKYQLAQVMGVAEKIKIAQTGDKEWRMILIKDSNKLVSG TVIRNPRITESEVLAIVKSSIQNDEILRVVCASKEWLKNYQIRKALVENPKTPIHSALRLLTTLTEKDLSHLAKSKNIQT VLSTQARKLLIAKKEKR
Sequences:
>Translated_257_residues MTVLFFLALDTDAEVHGSARKRLRGVPLAVLADAVACRTLHPRVLDALARLHYRYGELATQIAVHPNCDDGTRAFLAERG IAAAVGVTTVHPVHTTEHPPQDEVPAEEDDEPVDEESEQFKSKYQLAQVMGVAEKIKIAQTGDKEWRMILIKDSNKLVSG TVIRNPRITESEVLAIVKSSIQNDEILRVVCASKEWLKNYQIRKALVENPKTPIHSALRLLTTLTEKDLSHLAKSKNIQT VLSTQARKLLIAKKEKR >Mature_256_residues TVLFFLALDTDAEVHGSARKRLRGVPLAVLADAVACRTLHPRVLDALARLHYRYGELATQIAVHPNCDDGTRAFLAERGI AAAVGVTTVHPVHTTEHPPQDEVPAEEDDEPVDEESEQFKSKYQLAQVMGVAEKIKIAQTGDKEWRMILIKDSNKLVSGT VIRNPRITESEVLAIVKSSIQNDEILRVVCASKEWLKNYQIRKALVENPKTPIHSALRLLTTLTEKDLSHLAKSKNIQTV LSTQARKLLIAKKEKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28660; Mature: 28529
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLFFLALDTDAEVHGSARKRLRGVPLAVLADAVACRTLHPRVLDALARLHYRYGELAT CEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QIAVHPNCDDGTRAFLAERGIAAAVGVTTVHPVHTTEHPPQDEVPAEEDDEPVDEESEQF HEEECCCCCCHHHHHHHHCCCHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH KSKYQLAQVMGVAEKIKIAQTGDKEWRMILIKDSNKLVSGTVIRNPRITESEVLAIVKSS HHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHH IQNDEILRVVCASKEWLKNYQIRKALVENPKTPIHSALRLLTTLTEKDLSHLAKSKNIQT CCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLSTQARKLLIAKKEKR HHHHHHHHHHHHCCCCC >Mature Secondary Structure TVLFFLALDTDAEVHGSARKRLRGVPLAVLADAVACRTLHPRVLDALARLHYRYGELAT EEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QIAVHPNCDDGTRAFLAERGIAAAVGVTTVHPVHTTEHPPQDEVPAEEDDEPVDEESEQF HEEECCCCCCHHHHHHHHCCCHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH KSKYQLAQVMGVAEKIKIAQTGDKEWRMILIKDSNKLVSGTVIRNPRITESEVLAIVKSS HHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHH IQNDEILRVVCASKEWLKNYQIRKALVENPKTPIHSALRLLTTLTEKDLSHLAKSKNIQT CCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH VLSTQARKLLIAKKEKR HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA