Click here to switch to the map view.

The map label for this gene is osmY [C]

Identifier: 39997023

GI number: 39997023

Start: 2103662

End: 2104483

Strand: Reverse

Name: osmY [C]

Synonym: GSU1925

Alternate gene names: 39997023

Gene position: 2104483-2103662 (Counterclockwise)

Preceding gene: 39997025

Following gene: 39997019

Centisome position: 55.18

GC content: 55.23

Gene sequence:

>822_bases
ATGGCAGTAATTACGATCTCCAGAGAGATGGGTACGGGAGCTTACCAGATTGCCCGCGAGGTGGCCAAGCGCCTCAAACA
TACCCTTGTCGACGGTAACAAGATCGCGGAGCTTGCGCCCCGTTACGGCCTTGACAAGGAGCTTCTCAAGCGAGTGGACG
AAAAGCCTCCGGTCTATATCACTGCCGAGGACCGGATGCACGCCGCGCATCTCAACACGATCGAAATCATAATCCTCGAC
TGTGTCAAACAGGGAAACGTGATCCTTTACGGTCGCGGCGCCCAGGACCTTCTCTCCGATGTGGAGAATATTCTCAGAAT
CCGCTTTATCGCCCCCTTTGAGCACCGGGTTGAAAACTTTTCCGAGCGCGAATGGATTGATCCCGACCTGGCGCGGGAAC
TCATCCGCAAGAGCGACCATCAGCGGGGCGGCTTCATTCATTTTTACTTCAATCGTGACTGGAACGATTCGCTCGGCTAT
GACCTGACGTTCAACACCGAGCGTATGAGCCAGAGCGCGATTATCGAAAGCATCATCGCGGCGGCAAAGGATTCCCGCCT
CAAAGAGGGGGAGGAACGTCTGAAGCAGGTGATCGATGAGACCATCCTTGCCAAGAAGGTGGAAACGGCCTTTCTCAAGT
CTGGCGACATTGAGTACATTCATTTCAGGATCAGCGTATCCGGCAAGGTAGTGAGTTTCTCAGGCCACGTGCATTCCGAG
GCGGAAAAACGGGAGGCGATCCGCCTCGCTACCGCCGTCGAAGGCGTCGAGAGGGTCGAAGGAGACTTGCAGGTCCTGAA
CTATAAGTCCCACAAGGGGTAG

Upstream 100 bases:

>100_bases
TATAGCCTTTAACATGTTGTAATTGTTTATCAAAATAACTCCTTGTATACACCAATTCCTCATGCTAGGATTAGTCACTT
TCCCCAGTACAGGAGGGCAC

Downstream 100 bases:

>100_bases
CCGAAGGTTCCGCACCCTCTGCCTTTCACGTATCAGACACATCCCGGCGCGCCGGCGGTTACCTTCCGCCCGGCGCGCCA
TTTGCTTCAGGGAGCGGATA

Product: transport-associated domain protein

Products: NA

Alternate protein names: Cytidylate Kinase; Cytoplasmic Protein; Cytidylate Kinase Putative; Transport-Associated Domain Protein; Bon Domain-Containing Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAVITISREMGTGAYQIAREVAKRLKHTLVDGNKIAELAPRYGLDKELLKRVDEKPPVYITAEDRMHAAHLNTIEIIILD
CVKQGNVILYGRGAQDLLSDVENILRIRFIAPFEHRVENFSEREWIDPDLARELIRKSDHQRGGFIHFYFNRDWNDSLGY
DLTFNTERMSQSAIIESIIAAAKDSRLKEGEERLKQVIDETILAKKVETAFLKSGDIEYIHFRISVSGKVVSFSGHVHSE
AEKREAIRLATAVEGVERVEGDLQVLNYKSHKG

Sequences:

>Translated_273_residues
MAVITISREMGTGAYQIAREVAKRLKHTLVDGNKIAELAPRYGLDKELLKRVDEKPPVYITAEDRMHAAHLNTIEIIILD
CVKQGNVILYGRGAQDLLSDVENILRIRFIAPFEHRVENFSEREWIDPDLARELIRKSDHQRGGFIHFYFNRDWNDSLGY
DLTFNTERMSQSAIIESIIAAAKDSRLKEGEERLKQVIDETILAKKVETAFLKSGDIEYIHFRISVSGKVVSFSGHVHSE
AEKREAIRLATAVEGVERVEGDLQVLNYKSHKG
>Mature_272_residues
AVITISREMGTGAYQIAREVAKRLKHTLVDGNKIAELAPRYGLDKELLKRVDEKPPVYITAEDRMHAAHLNTIEIIILDC
VKQGNVILYGRGAQDLLSDVENILRIRFIAPFEHRVENFSEREWIDPDLARELIRKSDHQRGGFIHFYFNRDWNDSLGYD
LTFNTERMSQSAIIESIIAAAKDSRLKEGEERLKQVIDETILAKKVETAFLKSGDIEYIHFRISVSGKVVSFSGHVHSEA
EKREAIRLATAVEGVERVEGDLQVLNYKSHKG

Specific function: Unknown

COG id: COG1102

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31129; Mature: 30998

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVITISREMGTGAYQIAREVAKRLKHTLVDGNKIAELAPRYGLDKELLKRVDEKPPVYI
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCCCEEE
TAEDRMHAAHLNTIEIIILDCVKQGNVILYGRGAQDLLSDVENILRIRFIAPFEHRVENF
EECCCCHHHHCCHHEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHEECCHHHHHCCC
SEREWIDPDLARELIRKSDHQRGGFIHFYFNRDWNDSLGYDLTFNTERMSQSAIIESIIA
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHH
AAKDSRLKEGEERLKQVIDETILAKKVETAFLKSGDIEYIHFRISVSGKVVSFSGHVHSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEEEECCCCCCH
AEKREAIRLATAVEGVERVEGDLQVLNYKSHKG
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
>Mature Secondary Structure 
AVITISREMGTGAYQIAREVAKRLKHTLVDGNKIAELAPRYGLDKELLKRVDEKPPVYI
EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCCCEEE
TAEDRMHAAHLNTIEIIILDCVKQGNVILYGRGAQDLLSDVENILRIRFIAPFEHRVENF
EECCCCHHHHCCHHEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHEECCHHHHHCCC
SEREWIDPDLARELIRKSDHQRGGFIHFYFNRDWNDSLGYDLTFNTERMSQSAIIESIIA
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHH
AAKDSRLKEGEERLKQVIDETILAKKVETAFLKSGDIEYIHFRISVSGKVVSFSGHVHSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEEEECCCCCCH
AEKREAIRLATAVEGVERVEGDLQVLNYKSHKG
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA