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The map label for this gene is tsf

Identifier: 39997018

GI number: 39997018

Start: 2098613

End: 2099263

Strand: Reverse

Name: tsf

Synonym: GSU1920

Alternate gene names: 39997018

Gene position: 2099263-2098613 (Counterclockwise)

Preceding gene: 39997019

Following gene: 39997017

Centisome position: 55.04

GC content: 55.76

Gene sequence:

>651_bases
GTGAGCATTACAGCTGCACAGGTCAACGAACTGCGTAAAATCACCGGTGCCGGCCTCATGGACTGCAAGAAGGCCCTCAC
CGAAACCAACGGCGATCTTGAGCAGGCGGTCGATTACCTCAGGAAAAAGGGTCTTGCTGCCGCTTCCAAAAAGGCGGGCC
GGGCAGCCACCGAAGGTGCTGTTGGCTCTTATATTCACGCCGGCGGCAAGATCGGTGTTCTTGTCGAAGTGAACTGCGAG
ACCGATTTCGTGGCGCGCAACGATAATTTCCAAGCATTCGTGAAGGATATCGCTATGCATATCGCCGCCGCTTCTCCTCA
ATATGTGCGTCGCGAGGAAGTGCCCGCGGAGCTGCTTGAGCGCGAGAAGGAAATCTACCGCGCCAAGGCCCGTGAGACGG
GCAAGCCGGAAAACATCATCGAGAAGATCATCGAGGGGCAGATCAACAAGTTCTACGCTGAGATATGCCTCATGGAGCAG
AATTTCGTCAAGGACCCGGACAAGACCGTTCAGCAGTTCCTGAACGAGACTATTTCGTCCATCGGCGAAAACATGTCGGT
TAGACGCTTCGCACGCTTCGTTCTGGGCGAAGGGCTTGAAAAGAAAGAATCGGACTTTGCCGCGGAGGTTGCCGCCGCAG
CGGGTCTGTAG

Upstream 100 bases:

>100_bases
GGAAGAGAGTGGCGCCGAGGCCTGATCCGGTCTGATTAATCACATCGCATAATGATCGGGATGGCGCCTCGGCGCCCGTC
CCTTCACCAGGGAGGATACA

Downstream 100 bases:

>100_bases
CAAGGCACACGGGCCGGTCATGAACATGGCCGGCTCTTTTTGCGTTCGCGCCGACAGCGGCGCTTTAACAGCGTGTACGA
GGACAGAACATCATGGGTAC

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSITAAQVNELRKITGAGLMDCKKALTETNGDLEQAVDYLRKKGLAAASKKAGRAATEGAVGSYIHAGGKIGVLVEVNCE
TDFVARNDNFQAFVKDIAMHIAAASPQYVRREEVPAELLEREKEIYRAKARETGKPENIIEKIIEGQINKFYAEICLMEQ
NFVKDPDKTVQQFLNETISSIGENMSVRRFARFVLGEGLEKKESDFAAEVAAAAGL

Sequences:

>Translated_216_residues
MSITAAQVNELRKITGAGLMDCKKALTETNGDLEQAVDYLRKKGLAAASKKAGRAATEGAVGSYIHAGGKIGVLVEVNCE
TDFVARNDNFQAFVKDIAMHIAAASPQYVRREEVPAELLEREKEIYRAKARETGKPENIIEKIIEGQINKFYAEICLMEQ
NFVKDPDKTVQQFLNETISSIGENMSVRRFARFVLGEGLEKKESDFAAEVAAAAGL
>Mature_215_residues
SITAAQVNELRKITGAGLMDCKKALTETNGDLEQAVDYLRKKGLAAASKKAGRAATEGAVGSYIHAGGKIGVLVEVNCET
DFVARNDNFQAFVKDIAMHIAAASPQYVRREEVPAELLEREKEIYRAKARETGKPENIIEKIIEGQINKFYAEICLMEQN
FVKDPDKTVQQFLNETISSIGENMSVRRFARFVLGEGLEKKESDFAAEVAAAAGL

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI291084498, Length=94, Percent_Identity=45.7446808510638, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI291084502, Length=94, Percent_Identity=45.7446808510638, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI291084500, Length=94, Percent_Identity=45.7446808510638, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI171846268, Length=94, Percent_Identity=45.7446808510638, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1786366, Length=159, Percent_Identity=45.9119496855346, Blast_Score=122, Evalue=2e-29,
Organism=Drosophila melanogaster, GI19921466, Length=114, Percent_Identity=40.3508771929825, Blast_Score=77, Evalue=8e-15,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_GEOSL (P61333)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_952969.1
- ProteinModelPortal:   P61333
- SMR:   P61333
- GeneID:   2685331
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU1920
- NMPDR:   fig|243231.1.peg.1907
- TIGR:   GSU1920
- HOGENOM:   HBG713289
- OMA:   MVELSCE
- ProtClustDB:   PRK12332
- BioCyc:   GSUL243231:GSU_1920-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 23689; Mature: 23558

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITAAQVNELRKITGAGLMDCKKALTETNGDLEQAVDYLRKKGLAAASKKAGRAATEGA
CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCHHHCCH
VGSYIHAGGKIGVLVEVNCETDFVARNDNFQAFVKDIAMHIAAASPQYVRREEVPAELLE
HHHHHHCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHH
REKEIYRAKARETGKPENIIEKIIEGQINKFYAEICLMEQNFVKDPDKTVQQFLNETISS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IGENMSVRRFARFVLGEGLEKKESDFAAEVAAAAGL
HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SITAAQVNELRKITGAGLMDCKKALTETNGDLEQAVDYLRKKGLAAASKKAGRAATEGA
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCHHHCCH
VGSYIHAGGKIGVLVEVNCETDFVARNDNFQAFVKDIAMHIAAASPQYVRREEVPAELLE
HHHHHHCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHH
REKEIYRAKARETGKPENIIEKIIEGQINKFYAEICLMEQNFVKDPDKTVQQFLNETISS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IGENMSVRRFARFVLGEGLEKKESDFAAEVAAAAGL
HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA