| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is yhbN [C]
Identifier: 39996987
GI number: 39996987
Start: 2067405
End: 2067908
Strand: Reverse
Name: yhbN [C]
Synonym: GSU1889
Alternate gene names: 39996987
Gene position: 2067908-2067405 (Counterclockwise)
Preceding gene: 39996988
Following gene: 39996986
Centisome position: 54.22
GC content: 58.53
Gene sequence:
>504_bases ATGAAGCGGACGATCATCTCCGCGCTTTTCCTGCTGACCGTAACGGCGATGGCCGTTGCCGGACCATTGCCGGCCAGTCG GGGGGGGCAGCCGATAACAGTCAAGTCCAACGAACTTTCCGCCGACAGTCGTAATCGGACCGCTACGTTCAGCGGCAAGG TTACGGCCAGGCAGGGCGATCTGACCATTTACTCCGATCGCCTCATTGTTCACTACCGTGATGACGGGGGCGACGTCGAG AAGGTCGAGGCGGTCGGCAACGTTAAGATCGTCCAGGGCAACCGGCTTGCCACGGCCAAGGAGGGAGTTTACTACAATAC GGAGCAGAAGATCGTCCTGAGTGGTGATCCCAAGGTGTATCAGGGAGAAAACATGATCTCCGGCAAGGTTATCACGTACT TCGTCAACGAAGAGCGGAGCGTTGTGACCGGTGGCGGCGATTCCCGGGTCGAGGCTGTCATCCATCCGACGGATAAGGGG AAGAATGGCGGCACGAAGCGTTGA
Upstream 100 bases:
>100_bases GCCGTTGAAGGGGTTGGAATGGAGTTTCTTGTCCCGACCCGCACCTTGCGGATACTGAACGATGTGCGGGCGACCATCGC GCCCGCCCCAAAGGATTGAA
Downstream 100 bases:
>100_bases AACGGCCCTCAGAGCACATGGCCTGAAAAAATCGTTCGGCAAGCGCACGGTGGTAAATGGTGTCGATCTCCTGGTGGCAC CCGGCACCGTCGTTGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: OstA Family Protein; OstA-Like Protein; Organic Solvent lerance Protein OstA; Osta Family Protein; Organic Solvent lerance Protein
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKRTIISALFLLTVTAMAVAGPLPASRGGQPITVKSNELSADSRNRTATFSGKVTARQGDLTIYSDRLIVHYRDDGGDVE KVEAVGNVKIVQGNRLATAKEGVYYNTEQKIVLSGDPKVYQGENMISGKVITYFVNEERSVVTGGGDSRVEAVIHPTDKG KNGGTKR
Sequences:
>Translated_167_residues MKRTIISALFLLTVTAMAVAGPLPASRGGQPITVKSNELSADSRNRTATFSGKVTARQGDLTIYSDRLIVHYRDDGGDVE KVEAVGNVKIVQGNRLATAKEGVYYNTEQKIVLSGDPKVYQGENMISGKVITYFVNEERSVVTGGGDSRVEAVIHPTDKG KNGGTKR >Mature_167_residues MKRTIISALFLLTVTAMAVAGPLPASRGGQPITVKSNELSADSRNRTATFSGKVTARQGDLTIYSDRLIVHYRDDGGDVE KVEAVGNVKIVQGNRLATAKEGVYYNTEQKIVLSGDPKVYQGENMISGKVITYFVNEERSVVTGGGDSRVEAVIHPTDKG KNGGTKR
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17944; Mature: 17944
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTIISALFLLTVTAMAVAGPLPASRGGQPITVKSNELSADSRNRTATFSGKVTARQGD CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCEEEEECCC LTIYSDRLIVHYRDDGGDVEKVEAVGNVKIVQGNRLATAKEGVYYNTEQKIVLSGDPKVY EEEEECEEEEEEECCCCCEEEEEECCCEEEEECCEEEEECCCEEECCCCEEEECCCCCEE QGENMISGKVITYFVNEERSVVTGGGDSRVEAVIHPTDKGKNGGTKR ECCCEECCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKRTIISALFLLTVTAMAVAGPLPASRGGQPITVKSNELSADSRNRTATFSGKVTARQGD CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCEEEEECCC LTIYSDRLIVHYRDDGGDVEKVEAVGNVKIVQGNRLATAKEGVYYNTEQKIVLSGDPKVY EEEEECEEEEEEECCCCCEEEEEECCCEEEEECCEEEEECCCEEECCCCEEEECCCCCEE QGENMISGKVITYFVNEERSVVTGGGDSRVEAVIHPTDKGKNGGTKR ECCCEECCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA