| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is ahcY
Identifier: 39996973
GI number: 39996973
Start: 2053629
End: 2055056
Strand: Reverse
Name: ahcY
Synonym: GSU1875
Alternate gene names: 39996973
Gene position: 2055056-2053629 (Counterclockwise)
Preceding gene: 39996974
Following gene: 39996972
Centisome position: 53.88
GC content: 59.59
Gene sequence:
>1428_bases ATGACCCAACCCGTTGCGCGGGACACCGCCGGAACGTTCAGCGACTATTGCATCAGCGATATTTCTCTTGCTGCCTGGGG ACGCAAGGAGATGATCATTGCCGAGACCGAAATGCCGGGTCTCATGGCGATCCGCGAAGAGTACGCCGCCACCCGGCCCC TCCAGGGTGCCCGCATCGCCGGCTCGCTCCACATGACCATCCAGACCGCCATGCTCATCGAGACCCTCGTGGCCCTCGGT GCCGAGGTACGCTGGGCTTCGTGCAACATCTTCTCCACCCAGGACCACGCGGCCGCAGCCATCGCCGCCGCCGGTATCCC CGTTTTTGCCTACAAGGGCGAATCGCTTGAGGAGTACTGGGAGTTCACCCACCGGATATTCGAGTGGCACGACGGCGGCA CTCCCAACATGATCCTCGACGACGGAGGCGACGCTACACTGCTCCTGCACTTGGGGAGCGACGCCGAAAAAGATCCCTCG GTTATCGCCAATCCCACCTGCGAGGAGGAGCAGTACCTCTTCGCCTCCATCAAAAAACGTCTCGCCGAGAAGCCGGGGTG GTACTCGAAAACCGCCGCCGCAATCAAGGGGGTAACTGAAGAAACCACCACCGGCGTGCACCGCCTCTACCAGATGCATG AGAAGGGAAAGCTCAAGTTCCCGGCCATCAACGTCAACGATTCGGTTACCAAGTCCAAATTCGACAATATCTACGGGTGC CGCGAGTCGCTCGTGGACGGCATCAAGCGGGCCACCGACGTGATGATAGCCGGCAAGGTCGCCGTGATCTGCGGCTACGG CGAGGTGGGCAAAGGGTGCGCCCAGGCCATGCGCGGGCTTCAGGCCCAGGTATGGGTAACTGAAATCGACCCCATCTGCG CGCTTCAGGCTGCCATGGAAGGATACAGGGTAGTCACCATGGAATACGCCGCAGATAAGGCCGACATCTTCGTTACAACC ACCGGCAACATCAACGTCATAACCCACGACCACATGAAGGCCATGCGGCACAACGCCATTGTCTGCAACATCGGCCATTT CGACAACGAGATCGAAGTGGCGGCGCTGAAGCAGTACCAGTGGGAAAACATCAAGCCCCAAGTGGATCACATCATCTTTC CCGACAGTAAGCGGATCATTCTGCTAGCCGAGGGTCGCCTTGTGAACCTCGGCTGCGCCACGGGACATCCGTCCTATGTC ATGTCTTCTTCCTTTGCCAACCAGACCCTTGCCCAGATAGAACTCTTCTGTAACCCCGGCAAGTATCCGGTCGGCGTCTA CATGCTTCCCAAGGAGCTGGACGAGAAGGTCGCACGGCTTCAGCTGAAGACGCTGGGAGCCATGCTGACCGAGCTCACCG ACGAGCAGGCCGCCTACATCGGGGTGCCCAAAAACGGCCCCTACAAATCGGCTCACTACCGCTACTAA
Upstream 100 bases:
>100_bases GGCCTTTTTCGTTGCAGGATGGTTTCTTTTTTGACCGGATTGGATGTGACGTGATATATAGTTCGTTTAAATTACTCTCT CATCAGGATGGAGGCCTACA
Downstream 100 bases:
>100_bases CCTAACATCGGTCGTGAAGCTTCCGGCCAGGCCGTCGGCGCGATGACGCCGGCGGCCTTTGTCATATTCCGGCGCTCTCC CTAAATATATTACTCAAGAA
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MTQPVARDTAGTFSDYCISDISLAAWGRKEMIIAETEMPGLMAIREEYAATRPLQGARIAGSLHMTIQTAMLIETLVALG AEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEKDPS VIANPTCEEEQYLFASIKKRLAEKPGWYSKTAAAIKGVTEETTTGVHRLYQMHEKGKLKFPAINVNDSVTKSKFDNIYGC RESLVDGIKRATDVMIAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTT TGNINVITHDHMKAMRHNAIVCNIGHFDNEIEVAALKQYQWENIKPQVDHIIFPDSKRIILLAEGRLVNLGCATGHPSYV MSSSFANQTLAQIELFCNPGKYPVGVYMLPKELDEKVARLQLKTLGAMLTELTDEQAAYIGVPKNGPYKSAHYRY
Sequences:
>Translated_475_residues MTQPVARDTAGTFSDYCISDISLAAWGRKEMIIAETEMPGLMAIREEYAATRPLQGARIAGSLHMTIQTAMLIETLVALG AEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEKDPS VIANPTCEEEQYLFASIKKRLAEKPGWYSKTAAAIKGVTEETTTGVHRLYQMHEKGKLKFPAINVNDSVTKSKFDNIYGC RESLVDGIKRATDVMIAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTT TGNINVITHDHMKAMRHNAIVCNIGHFDNEIEVAALKQYQWENIKPQVDHIIFPDSKRIILLAEGRLVNLGCATGHPSYV MSSSFANQTLAQIELFCNPGKYPVGVYMLPKELDEKVARLQLKTLGAMLTELTDEQAAYIGVPKNGPYKSAHYRY >Mature_474_residues TQPVARDTAGTFSDYCISDISLAAWGRKEMIIAETEMPGLMAIREEYAATRPLQGARIAGSLHMTIQTAMLIETLVALGA EVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEKDPSV IANPTCEEEQYLFASIKKRLAEKPGWYSKTAAAIKGVTEETTTGVHRLYQMHEKGKLKFPAINVNDSVTKSKFDNIYGCR ESLVDGIKRATDVMIAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTTT GNINVITHDHMKAMRHNAIVCNIGHFDNEIEVAALKQYQWENIKPQVDHIIFPDSKRIILLAEGRLVNLGCATGHPSYVM SSSFANQTLAQIELFCNPGKYPVGVYMLPKELDEKVARLQLKTLGAMLTELTDEQAAYIGVPKNGPYKSAHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family
Homologues:
Organism=Homo sapiens, GI9951915, Length=462, Percent_Identity=61.038961038961, Blast_Score=536, Evalue=1e-152, Organism=Homo sapiens, GI239937451, Length=440, Percent_Identity=60.9090909090909, Blast_Score=508, Evalue=1e-144, Organism=Homo sapiens, GI195539337, Length=465, Percent_Identity=50.9677419354839, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI24308043, Length=465, Percent_Identity=50.9677419354839, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI298286489, Length=465, Percent_Identity=50.9677419354839, Blast_Score=478, Evalue=1e-135, Organism=Homo sapiens, GI195539349, Length=465, Percent_Identity=50.9677419354839, Blast_Score=477, Evalue=1e-134, Organism=Homo sapiens, GI21361647, Length=465, Percent_Identity=49.4623655913978, Blast_Score=453, Evalue=1e-127, Organism=Caenorhabditis elegans, GI17506425, Length=465, Percent_Identity=58.7096774193548, Blast_Score=529, Evalue=1e-150, Organism=Saccharomyces cerevisiae, GI6320882, Length=478, Percent_Identity=58.9958158995816, Blast_Score=524, Evalue=1e-149, Organism=Drosophila melanogaster, GI24642172, Length=462, Percent_Identity=60.1731601731602, Blast_Score=530, Evalue=1e-151, Organism=Drosophila melanogaster, GI24656245, Length=477, Percent_Identity=50.104821802935, Blast_Score=472, Evalue=1e-133, Organism=Drosophila melanogaster, GI45553387, Length=471, Percent_Identity=51.1677282377919, Blast_Score=466, Evalue=1e-131, Organism=Drosophila melanogaster, GI45553385, Length=470, Percent_Identity=51.063829787234, Blast_Score=464, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SAHH_GEOSL (P61617)
Other databases:
- EMBL: AE017180 - RefSeq: NP_952924.1 - ProteinModelPortal: P61617 - SMR: P61617 - GeneID: 2685778 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU1875 - NMPDR: fig|243231.1.peg.1862 - TIGR: GSU1875 - HOGENOM: HBG352029 - OMA: VITHDHM - ProtClustDB: PRK05476 - BioCyc: GSUL243231:GSU_1875-MONOMER - BRENDA: 3.3.1.1 - GO: GO:0005737 - GO: GO:0005488 - HAMAP: MF_00563 - InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 - PANTHER: PTHR23420 - PIRSF: PIRSF001109 - TIGRFAMs: TIGR00936
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD
EC number: =3.3.1.1
Molecular weight: Translated: 52284; Mature: 52153
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00738 ADOHCYASE_1; PS00739 ADOHCYASE_2
Important sites: BINDING 66-66 BINDING 141-141 BINDING 201-201 BINDING 231-231 BINDING 235-235 BINDING 236-236 BINDING 288-288 BINDING 323-323 BINDING 389-389
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPVARDTAGTFSDYCISDISLAAWGRKEMIIAETEMPGLMAIREEYAATRPLQGARIA CCCCCCCCCCCCCHHHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEE GSLHMTIQTAMLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYW CEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEECCCCHHHHH EFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEKDPSVIANPTCEEEQYLFASIKKR HHHHHHHEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHH LAEKPGWYSKTAAAIKGVTEETTTGVHRLYQMHEKGKLKFPAINVNDSVTKSKFDNIYGC HHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCEECCCCCHHHHHHHHHHHH RESLVDGIKRATDVMIAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAME HHHHHHHHHHHHHEEEECCEEEEECCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHHHC GYRVVTMEYAADKADIFVTTTGNINVITHDHMKAMRHNAIVCNIGHFDNEIEVAALKQYQ CCEEEEEEECCCCCCEEEEECCCEEEEEHHHHHHHHCCEEEEEECCCCCCEEEEEEHHHC WENIKPQVDHIIFPDSKRIILLAEGRLVNLGCATGHPSYVMSSSFANQTLAQIELFCNPG CCCCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHCCEEEEEEEECCC KYPVGVYMLPKELDEKVARLQLKTLGAMLTELTDEQAAYIGVPKNGPYKSAHYRY CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure TQPVARDTAGTFSDYCISDISLAAWGRKEMIIAETEMPGLMAIREEYAATRPLQGARIA CCCCCCCCCCCCHHHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEE GSLHMTIQTAMLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYW CEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEECCCCHHHHH EFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEKDPSVIANPTCEEEQYLFASIKKR HHHHHHHEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHH LAEKPGWYSKTAAAIKGVTEETTTGVHRLYQMHEKGKLKFPAINVNDSVTKSKFDNIYGC HHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCEECCCCCHHHHHHHHHHHH RESLVDGIKRATDVMIAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICALQAAME HHHHHHHHHHHHHEEEECCEEEEECCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHHHC GYRVVTMEYAADKADIFVTTTGNINVITHDHMKAMRHNAIVCNIGHFDNEIEVAALKQYQ CCEEEEEEECCCCCCEEEEECCCEEEEEHHHHHHHHCCEEEEEECCCCCCEEEEEEHHHC WENIKPQVDHIIFPDSKRIILLAEGRLVNLGCATGHPSYVMSSSFANQTLAQIELFCNPG CCCCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHCCEEEEEEEECCC KYPVGVYMLPKELDEKVARLQLKTLGAMLTELTDEQAAYIGVPKNGPYKSAHYRY CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA