| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996939
Identifier: 39996939
GI number: 39996939
Start: 2007085
End: 2007903
Strand: Reverse
Name: 39996939
Synonym: GSU1840
Alternate gene names: NA
Gene position: 2007903-2007085 (Counterclockwise)
Preceding gene: 39996940
Following gene: 39996938
Centisome position: 52.64
GC content: 65.32
Gene sequence:
>819_bases ATGGGGCGGTGCATCTTGGGGGTGATAGTTGCGGCATCCGTTCTGGTGGCGCTCACGGCAACGGCTGCAATAGCGGAGGA TATGCCCTGGTCGGGCGAATTTCTGAGCCGGGAGGCACGGACGCTCCGCGACGAGTCTGCCGCTTTCGTAACGGCGCCCT TCAGGGTCGATAATGGTGCCCTGTGGGGGACACTGGCCGTAGCGGGGGCAGTGGGAGTCCTGTCGCAGTTCGACGAGGAT ATCCGGGACGAGGTGGCAGAAACGCGCGGCCGGACCCTTGACCGGATCACCGATGCCGGCAGTCTCGTGGGTAATCCGGT CATCCATCTGGGAGTGGCGGGTGCCGTTTATGGCGGCGGGCTGCTTGCCGGGTCCCCCCGCTGGCGGGATACGGGGCTCA TGATGGGCGAGGCGGCGCTCCTGGCCGATGCCGCAACCCTGGTGCTCAAGCAGGCTATTGGCCGCGCCCGACCCCTGACG GGCAAGGGGGGCGGCAGCTTCCGCCCGTTTGGGTTCGAATCGGATTACGATTCCATGCCCTCCATGCACACGGCCAGTTC CTTTGCCATGGCTTCGGTCATCACGTCCACGTCGGGAAGTGTGCCGGTGGGTGTCGTATCCTATGCAACGGCTGCCTTTG TGGGGTTTTCCCGCATGCAGGAAGGAAAGCACTGGGCCAGCGATGTGCTCCTGGGTGCCGCCATCGGCGAACTGGCCGGC AGGATCGTCACCCGCTTCCACGCCGGCGGCGGAAATCTGGCGCTGGTGCCGGCAGTGGCGGAAGACGCGGCAATCCTTTC CCTGGTCGGGAAATTCTAG
Upstream 100 bases:
>100_bases CCGAGCTGGGCGATCTGGCTGCGGATGCGGTGGGGGCCGGTCTCGTCTGCCTGCTTGCCTCCCGCACGGTGGTTGCCGGA AACAGGGAGGGATAGGGTCG
Downstream 100 bases:
>100_bases GAGGTTTTTCATGCTGTCAGCCGTTATCTTCGATTTCGACGGGATCATCGTCGATACCGAACCGCTCCACTACCGGGCAT TCCAGGCCATTCTCGAACCT
Product: PAP2 family protein
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase-Like Protein; Membrane-Associated Phosphatase; PAP2 Family Protein
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MGRCILGVIVAASVLVALTATAAIAEDMPWSGEFLSREARTLRDESAAFVTAPFRVDNGALWGTLAVAGAVGVLSQFDED IRDEVAETRGRTLDRITDAGSLVGNPVIHLGVAGAVYGGGLLAGSPRWRDTGLMMGEAALLADAATLVLKQAIGRARPLT GKGGGSFRPFGFESDYDSMPSMHTASSFAMASVITSTSGSVPVGVVSYATAAFVGFSRMQEGKHWASDVLLGAAIGELAG RIVTRFHAGGGNLALVPAVAEDAAILSLVGKF
Sequences:
>Translated_272_residues MGRCILGVIVAASVLVALTATAAIAEDMPWSGEFLSREARTLRDESAAFVTAPFRVDNGALWGTLAVAGAVGVLSQFDED IRDEVAETRGRTLDRITDAGSLVGNPVIHLGVAGAVYGGGLLAGSPRWRDTGLMMGEAALLADAATLVLKQAIGRARPLT GKGGGSFRPFGFESDYDSMPSMHTASSFAMASVITSTSGSVPVGVVSYATAAFVGFSRMQEGKHWASDVLLGAAIGELAG RIVTRFHAGGGNLALVPAVAEDAAILSLVGKF >Mature_271_residues GRCILGVIVAASVLVALTATAAIAEDMPWSGEFLSREARTLRDESAAFVTAPFRVDNGALWGTLAVAGAVGVLSQFDEDI RDEVAETRGRTLDRITDAGSLVGNPVIHLGVAGAVYGGGLLAGSPRWRDTGLMMGEAALLADAATLVLKQAIGRARPLTG KGGGSFRPFGFESDYDSMPSMHTASSFAMASVITSTSGSVPVGVVSYATAAFVGFSRMQEGKHWASDVLLGAAIGELAGR IVTRFHAGGGNLALVPAVAEDAAILSLVGKF
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27913; Mature: 27782
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRCILGVIVAASVLVALTATAAIAEDMPWSGEFLSREARTLRDESAAFVTAPFRVDNGA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECEEECCCC LWGTLAVAGAVGVLSQFDEDIRDEVAETRGRTLDRITDAGSLVGNPVIHLGVAGAVYGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECHHHHHCCC LLAGSPRWRDTGLMMGEAALLADAATLVLKQAIGRARPLTGKGGGSFRPFGFESDYDSMP EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SMHTASSFAMASVITSTSGSVPVGVVSYATAAFVGFSRMQEGKHWASDVLLGAAIGELAG CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RIVTRFHAGGGNLALVPAVAEDAAILSLVGKF HHHHHHCCCCCCEEEEECHHHHHHHHHHHCCC >Mature Secondary Structure GRCILGVIVAASVLVALTATAAIAEDMPWSGEFLSREARTLRDESAAFVTAPFRVDNGA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECEEECCCC LWGTLAVAGAVGVLSQFDEDIRDEVAETRGRTLDRITDAGSLVGNPVIHLGVAGAVYGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECHHHHHCCC LLAGSPRWRDTGLMMGEAALLADAATLVLKQAIGRARPLTGKGGGSFRPFGFESDYDSMP EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SMHTASSFAMASVITSTSGSVPVGVVSYATAAFVGFSRMQEGKHWASDVLLGAAIGELAG CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RIVTRFHAGGGNLALVPAVAEDAAILSLVGKF HHHHHHCCCCCCEEEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA