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The map label for this gene is 39996861

Identifier: 39996861

GI number: 39996861

Start: 1924429

End: 1925718

Strand: Reverse

Name: 39996861

Synonym: GSU1762

Alternate gene names: NA

Gene position: 1925718-1924429 (Counterclockwise)

Preceding gene: 39996862

Following gene: 39996856

Centisome position: 50.49

GC content: 58.68

Gene sequence:

>1290_bases
TTGAACGTCTTCCTGAAACGCCCTCTGTTGTTTACCCTTCCCCTGCTGCTCGGCTGCCTCGTGGTTGCCGCCCCGCCGGC
AACCGGCGCCGACCCGGTCGCCCAGAAAAAATACGGTGTCCAGTCCATTGATCTCGGCGAGTTGGAAAAGGGCATAGAGC
AGCTGGAGCAGGCGTTCTCTCTGTTTTCCCTGGACCCGACGCTGAGGGATAATCTCGCCACAGCCCATGCCCTTCTCGGG
CGGAAACTGCTGGAGAGCAAATCCTACGAGGAGGCGGCAAAGCACTTCGGGCGCGGCAGCGAACTCTATCCCGACGAACC
CCGTTTTCATCTTTTGAGAGGGATCGCCTTTTCTTTGGCCAAGAATGAAGAAATGGCCCGTCACGAGCTTTCCCTGGCCC
GGTCCCTCGGTGGAGATACGGCCGAAGGCCTGTATTTCCTGGGCAAGACATATTACGACGCGGGTGAGACCGACCAGGCC
ATGGCCCTTTGGGAAAAGGCTGCGACCCTTGCCCCCTCCGAGTCCTCCCTGGCCGGACTGCTGGAAAAGGTGCGGCGTGA
GCAGTCGGTCGAGGAGAGGATGGAACGCGGGCATAGTTCGCGCTTCATTGTTTCGTACGACAGCGGGACGAAGACTGACA
ATGCCCTGGCAATTCTTGATCTGCTTGAGGAGTTCTATAATTCGGTCGGCACCGACTTAGGATTCTTCCCCGCCTCACGA
ATCCCGGTCATACTCTACACTCGCCAGGACTACCGGGAGGTAACCCGATCGCCCCACTGGTCGGGCGGATTGTATGACGG
CAAAATCCGCCTCCCTGTCGGCGGCATAACAGAGATCACGCCGGATATCAGGGCAACTTTGCGCCATGAATATGTCCACG
CCGTTGTCATCGACCTGACTCGCGGTAATTGCCCCACCTGGCTGAACGAGGGGATTGCCGAAATACAGGGGCGCCTGGAG
TACAATCCCCCTCTCGGTGAGTTGGAAAAAGCGGCTAAACGTGGTGAGTTCTTGCCGTTGAAACGCCTTGAAGGATCATT
CGCCGGGCTCGAAGGAGGTGAGGTTCGTCTTGCCTATGAGCAAAGCTACTCCCTCGTCGATTTTATCGTTTCCGCCCATG
GATGGCACCGGCTTCGGATGGTCCTCGAAGATCTGGGAAGTGGCCTGTCGCTCGGCGAGGCAATGAACCGGGCGTTCGCC
GATGTGGGCCTCGATTATGACGGCCTGTTCGGCCGATGGCGCGATCATGTACTGAGAGAGGTGGGTGGCGGAGGCACGCC
GGAACGATAA

Upstream 100 bases:

>100_bases
ACGCCTATCGCCTCTCCTTCTCCGAAGAGGAGTTCTATGAGCAGAACCCCGACGAGCGGCTGCGGATGCAGTTCGAAGAT
GCTCCTCTCTGGGGTATGCG

Downstream 100 bases:

>100_bases
TCCGAGTTCGGGGAAAATAGAAAACGGCCTGCAAAAGCAGGCCGTTTTCCGTTGGAGATCAGAGTTGATCAGTTTGCGTT
GACAAAGGTCTTAAGATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MNVFLKRPLLFTLPLLLGCLVVAAPPATGADPVAQKKYGVQSIDLGELEKGIEQLEQAFSLFSLDPTLRDNLATAHALLG
RKLLESKSYEEAAKHFGRGSELYPDEPRFHLLRGIAFSLAKNEEMARHELSLARSLGGDTAEGLYFLGKTYYDAGETDQA
MALWEKAATLAPSESSLAGLLEKVRREQSVEERMERGHSSRFIVSYDSGTKTDNALAILDLLEEFYNSVGTDLGFFPASR
IPVILYTRQDYREVTRSPHWSGGLYDGKIRLPVGGITEITPDIRATLRHEYVHAVVIDLTRGNCPTWLNEGIAEIQGRLE
YNPPLGELEKAAKRGEFLPLKRLEGSFAGLEGGEVRLAYEQSYSLVDFIVSAHGWHRLRMVLEDLGSGLSLGEAMNRAFA
DVGLDYDGLFGRWRDHVLREVGGGGTPER

Sequences:

>Translated_429_residues
MNVFLKRPLLFTLPLLLGCLVVAAPPATGADPVAQKKYGVQSIDLGELEKGIEQLEQAFSLFSLDPTLRDNLATAHALLG
RKLLESKSYEEAAKHFGRGSELYPDEPRFHLLRGIAFSLAKNEEMARHELSLARSLGGDTAEGLYFLGKTYYDAGETDQA
MALWEKAATLAPSESSLAGLLEKVRREQSVEERMERGHSSRFIVSYDSGTKTDNALAILDLLEEFYNSVGTDLGFFPASR
IPVILYTRQDYREVTRSPHWSGGLYDGKIRLPVGGITEITPDIRATLRHEYVHAVVIDLTRGNCPTWLNEGIAEIQGRLE
YNPPLGELEKAAKRGEFLPLKRLEGSFAGLEGGEVRLAYEQSYSLVDFIVSAHGWHRLRMVLEDLGSGLSLGEAMNRAFA
DVGLDYDGLFGRWRDHVLREVGGGGTPER
>Mature_429_residues
MNVFLKRPLLFTLPLLLGCLVVAAPPATGADPVAQKKYGVQSIDLGELEKGIEQLEQAFSLFSLDPTLRDNLATAHALLG
RKLLESKSYEEAAKHFGRGSELYPDEPRFHLLRGIAFSLAKNEEMARHELSLARSLGGDTAEGLYFLGKTYYDAGETDQA
MALWEKAATLAPSESSLAGLLEKVRREQSVEERMERGHSSRFIVSYDSGTKTDNALAILDLLEEFYNSVGTDLGFFPASR
IPVILYTRQDYREVTRSPHWSGGLYDGKIRLPVGGITEITPDIRATLRHEYVHAVVIDLTRGNCPTWLNEGIAEIQGRLE
YNPPLGELEKAAKRGEFLPLKRLEGSFAGLEGGEVRLAYEQSYSLVDFIVSAHGWHRLRMVLEDLGSGLSLGEAMNRAFA
DVGLDYDGLFGRWRDHVLREVGGGGTPER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47528; Mature: 47528

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFLKRPLLFTLPLLLGCLVVAAPPATGADPVAQKKYGVQSIDLGELEKGIEQLEQAFS
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LFSLDPTLRDNLATAHALLGRKLLESKSYEEAAKHFGRGSELYPDEPRFHLLRGIAFSLA
HHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
KNEEMARHELSLARSLGGDTAEGLYFLGKTYYDAGETDQAMALWEKAATLAPSESSLAGL
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LEKVRREQSVEERMERGHSSRFIVSYDSGTKTDNALAILDLLEEFYNSVGTDLGFFPASR
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
IPVILYTRQDYREVTRSPHWSGGLYDGKIRLPVGGITEITPDIRATLRHEYVHAVVIDLT
CCEEEEECHHHHHHHCCCCCCCCEECCEEEECCCCCCCCCHHHHHHHHHHHHEEEEEEEC
RGNCPTWLNEGIAEIQGRLEYNPPLGELEKAAKRGEFLPLKRLEGSFAGLEGGEVRLAYE
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEEH
QSYSLVDFIVSAHGWHRLRMVLEDLGSGLSLGEAMNRAFADVGLDYDGLFGRWRDHVLRE
HCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VGGGGTPER
HCCCCCCCC
>Mature Secondary Structure
MNVFLKRPLLFTLPLLLGCLVVAAPPATGADPVAQKKYGVQSIDLGELEKGIEQLEQAFS
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LFSLDPTLRDNLATAHALLGRKLLESKSYEEAAKHFGRGSELYPDEPRFHLLRGIAFSLA
HHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
KNEEMARHELSLARSLGGDTAEGLYFLGKTYYDAGETDQAMALWEKAATLAPSESSLAGL
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
LEKVRREQSVEERMERGHSSRFIVSYDSGTKTDNALAILDLLEEFYNSVGTDLGFFPASR
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
IPVILYTRQDYREVTRSPHWSGGLYDGKIRLPVGGITEITPDIRATLRHEYVHAVVIDLT
CCEEEEECHHHHHHHCCCCCCCCEECCEEEECCCCCCCCCHHHHHHHHHHHHEEEEEEEC
RGNCPTWLNEGIAEIQGRLEYNPPLGELEKAAKRGEFLPLKRLEGSFAGLEGGEVRLAYE
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEEH
QSYSLVDFIVSAHGWHRLRMVLEDLGSGLSLGEAMNRAFADVGLDYDGLFGRWRDHVLRE
HCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VGGGGTPER
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA