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The map label for this gene is 39996780

Identifier: 39996780

GI number: 39996780

Start: 1841476

End: 1841907

Strand: Reverse

Name: 39996780

Synonym: GSU1680

Alternate gene names: NA

Gene position: 1841907-1841476 (Counterclockwise)

Preceding gene: 39996781

Following gene: 39996779

Centisome position: 48.29

GC content: 54.86

Gene sequence:

>432_bases
ATGCCCTATCGCTATCTGCCAGATATCGCCACGGCCGACGTCGCCTTTGAAGCGTGGGGTGAAACTCGTGAAGAGATGTT
CTGCGCTGCGGCTGATGCCCTCACCAATGTCATGGTCGACGACCTCGCGTCGGTCACCCCGACTGAAGAGATCGTCATCT
CTCTTGCAAACGAAGAATTAGACCTTCTTTTGTTCTCGTTTCTCCAGGAACTGATCTTTCTTAAAGACGCCCGATGTTTC
CTGCTCAGGGTCCCCCGGATCATGATCACCGAGACCGAGGAGGTCCTGCACCTCGATGCCATCGCCCGCGGCGAGCGGAT
CGATAATGAGCGCCATCCCATGATGGTCGATGTGAAGGCGGTAACTCTGCATCTTTTTTCGGTCTGGCGGCAAGAAAATG
ATTGGTGGGCCCGGGTGGTGCTTGATATATAG

Upstream 100 bases:

>100_bases
TCACTGCCGAGGACCAGGAAAAGCTCAACTGGATCAGGGCAAATGCCGAGAACGAAATCGATTTCGAGGCAATAGACGCT
CTGCTCTGATTGCCTGCGCC

Downstream 100 bases:

>100_bases
GGAGAATAAACTCAAGCCATCCGCGGAGGATGTTTTTAATGAAGATCAACTCGATCACGGCAGTTGCGGCATGCCTTATC
CCCTGTTTTCTGGCCAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPYRYLPDIATADVAFEAWGETREEMFCAAADALTNVMVDDLASVTPTEEIVISLANEELDLLLFSFLQELIFLKDARCF
LLRVPRIMITETEEVLHLDAIARGERIDNERHPMMVDVKAVTLHLFSVWRQENDWWARVVLDI

Sequences:

>Translated_143_residues
MPYRYLPDIATADVAFEAWGETREEMFCAAADALTNVMVDDLASVTPTEEIVISLANEELDLLLFSFLQELIFLKDARCF
LLRVPRIMITETEEVLHLDAIARGERIDNERHPMMVDVKAVTLHLFSVWRQENDWWARVVLDI
>Mature_142_residues
PYRYLPDIATADVAFEAWGETREEMFCAAADALTNVMVDDLASVTPTEEIVISLANEELDLLLFSFLQELIFLKDARCFL
LRVPRIMITETEEVLHLDAIARGERIDNERHPMMVDVKAVTLHLFSVWRQENDWWARVVLDI

Specific function: Unknown

COG id: COG1371

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0211 (archease) family [H]

Homologues:

Organism=Homo sapiens, GI30425510, Length=131, Percent_Identity=32.0610687022901, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002804
- InterPro:   IPR022952 [H]

Pfam domain/function: PF01951 DUF101 [H]

EC number: NA

Molecular weight: Translated: 16540; Mature: 16409

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYRYLPDIATADVAFEAWGETREEMFCAAADALTNVMVDDLASVTPTEEIVISLANEEL
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHH
DLLLFSFLQELIFLKDARCFLLRVPRIMITETEEVLHLDAIARGERIDNERHPMMVDVKA
HHHHHHHHHHHHHHCCCCEEEHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEEEHHH
VTLHLFSVWRQENDWWARVVLDI
HHHHHHHHHHCCCCEEEEEEEEC
>Mature Secondary Structure 
PYRYLPDIATADVAFEAWGETREEMFCAAADALTNVMVDDLASVTPTEEIVISLANEEL
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHH
DLLLFSFLQELIFLKDARCFLLRVPRIMITETEEVLHLDAIARGERIDNERHPMMVDVKA
HHHHHHHHHHHHHHCCCCEEEHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEEEHHH
VTLHLFSVWRQENDWWARVVLDI
HHHHHHHHHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]