| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is pyrE [H]
Identifier: 39996737
GI number: 39996737
Start: 1796556
End: 1797104
Strand: Direct
Name: pyrE [H]
Synonym: GSU1637
Alternate gene names: 39996737
Gene position: 1796556-1797104 (Clockwise)
Preceding gene: 39996736
Following gene: 39996738
Centisome position: 47.1
GC content: 57.19
Gene sequence:
>549_bases ATGACTGACAAGGACCGACTGAAGCAGATCATCCTGGAGCTGTCCTACGAAAAGCGGAAAGTAATCCTCGCTTCGGGCCG CGAAAGCGACTTCTATTTCGATGGTAAGCAGACCACCCTCCATGCCGAAGGGGGACTGCTGGTGGGCAAGCTCTTCTATG AGGCCATCAAGGATGTGGAAGGGGTCCAGGGGGTAGGGGGGATCACCCTCGGCGCCGACCCCATTGCCACGGCAACCTCC ATTGCCGCATTTCTGGATGGACGCCCGATGCACGCGTTCATCATCCGCAAAGAACCCAAGGGGCACGGCACGGGCCAGTG GCTTGAAGGACGCAAGAATCTTCCTCCCGGATCAAAGGTGGTCATTGTGGAAGATGTTGTGACCACCGGCGGATCTTCCA TGAAAGCCGTCAAGCGGGCTGAAGAGGAAGGGCTCAAGGTACTCTGCATCGTTTCCCTGGTTGACCGTGAAGAGGGGGGC CGCGAGAATATCGAACAGGAAGGGTACGAACTCCGGACAATTTTTACCAAGTCCGAGCTGCTGGCTTGA
Upstream 100 bases:
>100_bases CCTTCTGCAAAGCCTGTTTCTCCGGCGGCTACCCGATCACATTCCCGCGCCTCATGGCCGAACCCCAACTGGATCTTTTC TGAAAGGAGTGAACCGACCA
Downstream 100 bases:
>100_bases CAAGGGCCGGCGGCTTCGAAAGCATGAGGAGAAGGCAGGCGGGAGTGCACCCGCCTGCCTTTTTAATGGACCATGAAAGA AATTCTCGACCACTACGGCA
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTDKDRLKQIILELSYEKRKVILASGRESDFYFDGKQTTLHAEGGLLVGKLFYEAIKDVEGVQGVGGITLGADPIATATS IAAFLDGRPMHAFIIRKEPKGHGTGQWLEGRKNLPPGSKVVIVEDVVTTGGSSMKAVKRAEEEGLKVLCIVSLVDREEGG RENIEQEGYELRTIFTKSELLA
Sequences:
>Translated_182_residues MTDKDRLKQIILELSYEKRKVILASGRESDFYFDGKQTTLHAEGGLLVGKLFYEAIKDVEGVQGVGGITLGADPIATATS IAAFLDGRPMHAFIIRKEPKGHGTGQWLEGRKNLPPGSKVVIVEDVVTTGGSSMKAVKRAEEEGLKVLCIVSLVDREEGG RENIEQEGYELRTIFTKSELLA >Mature_181_residues TDKDRLKQIILELSYEKRKVILASGRESDFYFDGKQTTLHAEGGLLVGKLFYEAIKDVEGVQGVGGITLGADPIATATSI AAFLDGRPMHAFIIRKEPKGHGTGQWLEGRKNLPPGSKVVIVEDVVTTGGSSMKAVKRAEEEGLKVLCIVSLVDREEGGR ENIEQEGYELRTIFTKSELLA
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=161, Percent_Identity=32.2981366459627, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17554964, Length=196, Percent_Identity=33.6734693877551, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI17933654, Length=184, Percent_Identity=33.695652173913, Blast_Score=76, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 19876; Mature: 19745
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKDRLKQIILELSYEKRKVILASGRESDFYFDGKQTTLHAEGGLLVGKLFYEAIKDVE CCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHC GVQGVGGITLGADPIATATSIAAFLDGRPMHAFIIRKEPKGHGTGQWLEGRKNLPPGSKV CCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE VIVEDVVTTGGSSMKAVKRAEEEGLKVLCIVSLVDREEGGRENIEQEGYELRTIFTKSEL EEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHCCCEEEEEEEHHHH LA CC >Mature Secondary Structure TDKDRLKQIILELSYEKRKVILASGRESDFYFDGKQTTLHAEGGLLVGKLFYEAIKDVE CCHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHC GVQGVGGITLGADPIATATSIAAFLDGRPMHAFIIRKEPKGHGTGQWLEGRKNLPPGSKV CCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE VIVEDVVTTGGSSMKAVKRAEEEGLKVLCIVSLVDREEGGRENIEQEGYELRTIFTKSEL EEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHCCCEEEEEEEHHHH LA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA