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The map label for this gene is ywlF [H]

Identifier: 39996706

GI number: 39996706

Start: 1757333

End: 1757779

Strand: Direct

Name: ywlF [H]

Synonym: GSU1606

Alternate gene names: 39996706

Gene position: 1757333-1757779 (Clockwise)

Preceding gene: 39996705

Following gene: 39996707

Centisome position: 46.07

GC content: 61.52

Gene sequence:

>447_bases
GTGATAGTCGTCGGTAGCGATCACGGTGGTCTGGAACTGAAGGAAGCGGTTAAGCGGCTCCTTGCCGAGCGGGGGGAAAC
CTTCGAAGACTGCGGAACCGATAACGGCAACTCGGTTGATTACCCGGACTTCGGCATCAAGGTGGCCCGCAGGGTATCCA
ATGGCGAGGCAGGGAAGGGGATTCTCCTCTGCGGCACCGGCATCGGCATGTCGATCGTTGCCAACAAGTTTCCCCGGGTG
CGTGCGGCCCTTGCCACCGACGCCTTCATGGCACGCATGGCCAAGGAACATAATAACGCAAACATCCTGGTCCTCGGGGG
CCGGGTACTCGAGGAGGCCGTGGCCCGGGAGATGGTCATCGCATGGCTCGACGGTGTGTACGAAGGCGGCCGTCATCAGG
GTCGGCTCGACAAGATTGCGGCCCTGGAGCGGGAACTGATGAAGTAG

Upstream 100 bases:

>100_bases
GCCGCCCGGGAGAAGTCGATCACGTACGCCCTCAGCAATAACTTCGGTTTTGGGGGCACGAACGCGACGCTGCTCTTTAA
GAAAGTATAGGGGGCACGCA

Downstream 100 bases:

>100_bases
ACATCGTGCCTGATCGGCGGTTACATGAAGTTTGATACGGGACTGGATACGGTCCCGTTTTCCTTTTTCCCACTTTTACA
AGGAGACCTGACATGTCGAT

Product: ribose 5-phosphate isomerase B

Products: D-ribulose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MIVVGSDHGGLELKEAVKRLLAERGETFEDCGTDNGNSVDYPDFGIKVARRVSNGEAGKGILLCGTGIGMSIVANKFPRV
RAALATDAFMARMAKEHNNANILVLGGRVLEEAVAREMVIAWLDGVYEGGRHQGRLDKIAALERELMK

Sequences:

>Translated_148_residues
MIVVGSDHGGLELKEAVKRLLAERGETFEDCGTDNGNSVDYPDFGIKVARRVSNGEAGKGILLCGTGIGMSIVANKFPRV
RAALATDAFMARMAKEHNNANILVLGGRVLEEAVAREMVIAWLDGVYEGGRHQGRLDKIAALERELMK
>Mature_148_residues
MIVVGSDHGGLELKEAVKRLLAERGETFEDCGTDNGNSVDYPDFGIKVARRVSNGEAGKGILLCGTGIGMSIVANKFPRV
RAALATDAFMARMAKEHNNANILVLGGRVLEEAVAREMVIAWLDGVYEGGRHQGRLDKIAALERELMK

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=143, Percent_Identity=43.3566433566434, Blast_Score=127, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: 5.3.1.6

Molecular weight: Translated: 15968; Mature: 15968

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVGSDHGGLELKEAVKRLLAERGETFEDCGTDNGNSVDYPDFGIKVARRVSNGEAGKG
CEEECCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE
ILLCGTGIGMSIVANKFPRVRAALATDAFMARMAKEHNNANILVLGGRVLEEAVAREMVI
EEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHH
AWLDGVYEGGRHQGRLDKIAALERELMK
HHHHHHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVVGSDHGGLELKEAVKRLLAERGETFEDCGTDNGNSVDYPDFGIKVARRVSNGEAGKG
CEEECCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE
ILLCGTGIGMSIVANKFPRVRAALATDAFMARMAKEHNNANILVLGGRVLEEAVAREMVI
EEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHH
AWLDGVYEGGRHQGRLDKIAALERELMK
HHHHHHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 4.4 {D-ribose} 0.83 {D-ribose} [C]

Substrates: D-ribose 5-phosphate

Specific reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate

General reaction: Intramolecular oxidoreduction; Isomerization [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]