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The map label for this gene is 39996680

Identifier: 39996680

GI number: 39996680

Start: 1731236

End: 1732165

Strand: Direct

Name: 39996680

Synonym: GSU1580

Alternate gene names: NA

Gene position: 1731236-1732165 (Clockwise)

Preceding gene: 39996679

Following gene: 39996681

Centisome position: 45.39

GC content: 59.14

Gene sequence:

>930_bases
ATGCTAGTTTCACGTAAGAATTCAATGGGGCGACAGCCCCTTTCTTTTTTCCCGGGACCTACCATGATCCGCAGATTGGC
TGTTGTCATCGCACTCATCATCCTCGCCGCCATCGTTGTGCACGAGCCGGAAATCACGGCCGAGCCGGCGGCTTCTCCTC
TGGATCCGGCCAAGGAGGACCTGTCGCGGGTGGACTATCCGAGCCAACGAGATTTGGATTGGTATCCCCGCTTCATCAGG
CCCAACGACTCGCTTGAGTCGCTCTTCGGCGACGATTGGGTCTACATCGCCCGCTTCAACCGCATCGACCGTCGCCACAC
GTATCCCGGCATGACCATTAAGGTGCCGCGGGACATGGCGGTCGCCCGCGCGTACACGCCGCTGCCGAAGGAGTACGAAC
CGGCCAAGCGCTATGCAAAATATATTCTGGTAAGCCTCACCGAGCAGTGGATCGGGGCCTATGAGCGGGGAACGCTGAAG
TTTTCCATGCCGGCGGCAACCGGCAAAAAGGGAAACGAGACTCCGACGGGGCTTTTCCGGATTGATGCCCGGGATCGCAC
CCATACCTCATCGCTTTACCAGACTGATGACAACTCAGCCCAGTATCCCATGGACTATGCCATGAGGTTTTTCATCGATA
AGCAGAACGTCGGGTACTGGATTCATGCCCGCGACCTGCCCGGAAAGCCGGCCTCCCACGGCTGCGTGGGGCTTTTCGAC
GAGCCTATGCAGAACAGGATGTACGGCATCCCCGCGCGACCCGTGCTGCATGATTCAAAGAAACTGTATGATTGGGCCGT
CGGCGAGGCCGATCATGGCCCCGACAGCGGCACTATTGAGCTTATCGATGGGGGACCCGTCGTGGAGGTGATCGGCGAGA
ATCCGGTCTACCAGCCTGCTCCGCTGCGTCCCATGGTTGCTACGCGTTAG

Upstream 100 bases:

>100_bases
CATGGCATCCCGCCGCACCGACCCCTACAGCGCCGTGGACGCCGTGATCTCGGAGCGCCTCGGAACTCCTTGCCAAGAAT
CTTGACCCGGTGTGCCAATC

Downstream 100 bases:

>100_bases
CCCGAGCAGCATTCAGTCCTTTACTTTTACCGAGGCTGCGGCACACTCTTTCCCATGGATGTTATTACCACCCACGTGAA
CGCCGATTTCGATTGTCTCG

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: Peptidoglycan L D-Transpeptidase Lipoprotein; ErfK/YbiS/YcfS/YnhG Family; ErfK/YbiS/YcfS/YnhG; Protein Containg Ykud Domain

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLVSRKNSMGRQPLSFFPGPTMIRRLAVVIALIILAAIVVHEPEITAEPAASPLDPAKEDLSRVDYPSQRDLDWYPRFIR
PNDSLESLFGDDWVYIARFNRIDRRHTYPGMTIKVPRDMAVARAYTPLPKEYEPAKRYAKYILVSLTEQWIGAYERGTLK
FSMPAATGKKGNETPTGLFRIDARDRTHTSSLYQTDDNSAQYPMDYAMRFFIDKQNVGYWIHARDLPGKPASHGCVGLFD
EPMQNRMYGIPARPVLHDSKKLYDWAVGEADHGPDSGTIELIDGGPVVEVIGENPVYQPAPLRPMVATR

Sequences:

>Translated_309_residues
MLVSRKNSMGRQPLSFFPGPTMIRRLAVVIALIILAAIVVHEPEITAEPAASPLDPAKEDLSRVDYPSQRDLDWYPRFIR
PNDSLESLFGDDWVYIARFNRIDRRHTYPGMTIKVPRDMAVARAYTPLPKEYEPAKRYAKYILVSLTEQWIGAYERGTLK
FSMPAATGKKGNETPTGLFRIDARDRTHTSSLYQTDDNSAQYPMDYAMRFFIDKQNVGYWIHARDLPGKPASHGCVGLFD
EPMQNRMYGIPARPVLHDSKKLYDWAVGEADHGPDSGTIELIDGGPVVEVIGENPVYQPAPLRPMVATR
>Mature_309_residues
MLVSRKNSMGRQPLSFFPGPTMIRRLAVVIALIILAAIVVHEPEITAEPAASPLDPAKEDLSRVDYPSQRDLDWYPRFIR
PNDSLESLFGDDWVYIARFNRIDRRHTYPGMTIKVPRDMAVARAYTPLPKEYEPAKRYAKYILVSLTEQWIGAYERGTLK
FSMPAATGKKGNETPTGLFRIDARDRTHTSSLYQTDDNSAQYPMDYAMRFFIDKQNVGYWIHARDLPGKPASHGCVGLFD
EPMQNRMYGIPARPVLHDSKKLYDWAVGEADHGPDSGTIELIDGGPVVEVIGENPVYQPAPLRPMVATR

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34940; Mature: 34940

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSRKNSMGRQPLSFFPGPTMIRRLAVVIALIILAAIVVHEPEITAEPAASPLDPAKED
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
LSRVDYPSQRDLDWYPRFIRPNDSLESLFGDDWVYIARFNRIDRRHTYPGMTIKVPRDMA
HHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEHHHHHHHCCCCCCEEECCCCHH
VARAYTPLPKEYEPAKRYAKYILVSLTEQWIGAYERGTLKFSMPAATGKKGNETPTGLFR
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCEEEEECCCCCCCCCCCCCCCEEE
IDARDRTHTSSLYQTDDNSAQYPMDYAMRFFIDKQNVGYWIHARDLPGKPASHGCVGLFD
EECCCCCCCCHHEECCCCCCCCCHHHHHEEEEECCCCCEEEEECCCCCCCCCCCEEECCC
EPMQNRMYGIPARPVLHDSKKLYDWAVGEADHGPDSGTIELIDGGPVVEVIGENPVYQPA
CHHHCCEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCC
PLRPMVATR
CCCCCCCCC
>Mature Secondary Structure
MLVSRKNSMGRQPLSFFPGPTMIRRLAVVIALIILAAIVVHEPEITAEPAASPLDPAKED
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
LSRVDYPSQRDLDWYPRFIRPNDSLESLFGDDWVYIARFNRIDRRHTYPGMTIKVPRDMA
HHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEHHHHHHHCCCCCCEEECCCCHH
VARAYTPLPKEYEPAKRYAKYILVSLTEQWIGAYERGTLKFSMPAATGKKGNETPTGLFR
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCEEEEECCCCCCCCCCCCCCCEEE
IDARDRTHTSSLYQTDDNSAQYPMDYAMRFFIDKQNVGYWIHARDLPGKPASHGCVGLFD
EECCCCCCCCHHEECCCCCCCCCHHHHHEEEEECCCCCEEEEECCCCCCCCCCCEEECCC
EPMQNRMYGIPARPVLHDSKKLYDWAVGEADHGPDSGTIELIDGGPVVEVIGENPVYQPA
CHHHCCEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCC
PLRPMVATR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA