Click here to switch to the map view.

The map label for this gene is 39996671

Identifier: 39996671

GI number: 39996671

Start: 1723859

End: 1724956

Strand: Direct

Name: 39996671

Synonym: GSU1571

Alternate gene names: NA

Gene position: 1723859-1724956 (Clockwise)

Preceding gene: 39996670

Following gene: 39996672

Centisome position: 45.2

GC content: 61.2

Gene sequence:

>1098_bases
ATGAGAATAGCAATCGAGGAGTACTCATCCGCGTGGGAGAGAGCTTTTCTGGCCGAGCGAAAGCGCCTCTTGGGTACTGC
ACTCCCAGTAGATGCCCACGTTGAGCATATCGGCAGTACGGCGGTTACAGGGTTGGCTGCAAAGCCGGTCATTGATATCA
TGATCGGCCTTCTGAGGGAGAAGGAGCTTGACGTACTGGTCGGTCCTGTCAGAAGTCTCGGCTACGAGTACCTGCCCGAA
TATGAGACGGTGATGCCGTTCCGTCGCTTTTTCCGGCGCATCGGTGATGCCGGGGTTTCATTTCATCTGCATGCGGTAGT
TAAGGAGACGGCATTCTGGCAGGATCACCTGCTGTTCCGCGATCTGCTGCGCGGCGACGATGCCTTGCGAACTGCTTACG
AAGCCCTGAAAAAACAGCTGTCTGAGCAGGAGTGGCCATCGGGAGACCAGTACGCCGCAGCCAAATTTGGCTTCATTAAG
GAAGCACTCTCGCGCGGCCGGATCGCAGGTGCTGGAGCTACCGGTAGGGTTGTCTACCAGGTCTCCTCGGTGCCGCTGGC
ACCCGGCGCCTGGTTGCGGCCCTACTACCTGCAGCGTTATGGAGCTATGATCAATGCGGCCATAGCGGCTCTCTCCACCG
GTGAAAAAGCGCTTCTCGCCTATTGCCAGAAGGAGGCATGGCTGCTCCTGGAGATGCCGCAGGAGATCCCGTCTTTGAAG
CCCGAACAGCTCAAAATGATGATCGTGCTTGAAGCCCTTTTCGAGCAGGTGCGGCATGAGGAGGCCCCCACGCTGCCGAG
CCGCCTGGCGAGCATATTCACCTGGCCGGTGCCGGGGGTGGCGCAGCGCTTCAGGGATGCCTATTTCCCCGGCGGGGTCA
TTCACCGCTGCGTGATCCGGTCCGGCTCTGCCCTCGAATTCGACGGCGCCCTGCTGCCGCCGGGGATCAACCTCGACCAG
GCCGGCCCGCTTGCCATGGCCGAAGAGGTGAGGCGTGTCCGGCAGCGGGCGGAACGCTACTGGCGCCGCGCCCATGAACC
GGAGTTCCCTGAGCTGCTGGTGCAAGGGACCGTGGAAGTGGTCGGGCGGGAGGGTTGA

Upstream 100 bases:

>100_bases
TGCCGTGGATGTTGTGAGAGATCGGTTTGGGGACTTCACGGTACGTTCGGTACTATCCTGCTGATACTCTGATTGCCTTG
GGTTGAGGGAGCCGTCAGGA

Downstream 100 bases:

>100_bases
CGTCCGGCCACACAACTAATAGTTGGTGCACGAACGTGCGGTGGGAGACTGGAACGATGGATGTCATCTATTATGTCGCA
GCAAGCCTGGACGGCTACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MRIAIEEYSSAWERAFLAERKRLLGTALPVDAHVEHIGSTAVTGLAAKPVIDIMIGLLREKELDVLVGPVRSLGYEYLPE
YETVMPFRRFFRRIGDAGVSFHLHAVVKETAFWQDHLLFRDLLRGDDALRTAYEALKKQLSEQEWPSGDQYAAAKFGFIK
EALSRGRIAGAGATGRVVYQVSSVPLAPGAWLRPYYLQRYGAMINAAIAALSTGEKALLAYCQKEAWLLLEMPQEIPSLK
PEQLKMMIVLEALFEQVRHEEAPTLPSRLASIFTWPVPGVAQRFRDAYFPGGVIHRCVIRSGSALEFDGALLPPGINLDQ
AGPLAMAEEVRRVRQRAERYWRRAHEPEFPELLVQGTVEVVGREG

Sequences:

>Translated_365_residues
MRIAIEEYSSAWERAFLAERKRLLGTALPVDAHVEHIGSTAVTGLAAKPVIDIMIGLLREKELDVLVGPVRSLGYEYLPE
YETVMPFRRFFRRIGDAGVSFHLHAVVKETAFWQDHLLFRDLLRGDDALRTAYEALKKQLSEQEWPSGDQYAAAKFGFIK
EALSRGRIAGAGATGRVVYQVSSVPLAPGAWLRPYYLQRYGAMINAAIAALSTGEKALLAYCQKEAWLLLEMPQEIPSLK
PEQLKMMIVLEALFEQVRHEEAPTLPSRLASIFTWPVPGVAQRFRDAYFPGGVIHRCVIRSGSALEFDGALLPPGINLDQ
AGPLAMAEEVRRVRQRAERYWRRAHEPEFPELLVQGTVEVVGREG
>Mature_365_residues
MRIAIEEYSSAWERAFLAERKRLLGTALPVDAHVEHIGSTAVTGLAAKPVIDIMIGLLREKELDVLVGPVRSLGYEYLPE
YETVMPFRRFFRRIGDAGVSFHLHAVVKETAFWQDHLLFRDLLRGDDALRTAYEALKKQLSEQEWPSGDQYAAAKFGFIK
EALSRGRIAGAGATGRVVYQVSSVPLAPGAWLRPYYLQRYGAMINAAIAALSTGEKALLAYCQKEAWLLLEMPQEIPSLK
PEQLKMMIVLEALFEQVRHEEAPTLPSRLASIFTWPVPGVAQRFRDAYFPGGVIHRCVIRSGSALEFDGALLPPGINLDQ
AGPLAMAEEVRRVRQRAERYWRRAHEPEFPELLVQGTVEVVGREG

Specific function: Unknown

COG id: COG2320

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0157 (GrpB) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007344 [H]

Pfam domain/function: PF04229 UPF0157 [H]

EC number: NA

Molecular weight: Translated: 40924; Mature: 40924

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAIEEYSSAWERAFLAERKRLLGTALPVDAHVEHIGSTAVTGLAAKPVIDIMIGLLRE
CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELDVLVGPVRSLGYEYLPEYETVMPFRRFFRRIGDAGVSFHLHAVVKETAFWQDHLLFR
HHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
DLLRGDDALRTAYEALKKQLSEQEWPSGDQYAAAKFGFIKEALSRGRIAGAGATGRVVYQ
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEE
VSSVPLAPGAWLRPYYLQRYGAMINAAIAALSTGEKALLAYCQKEAWLLLEMPQEIPSLK
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECHHHCCCCC
PEQLKMMIVLEALFEQVRHEEAPTLPSRLASIFTWPVPGVAQRFRDAYFPGGVIHRCVIR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHC
SGSALEFDGALLPPGINLDQAGPLAMAEEVRRVRQRAERYWRRAHEPEFPELLVQGTVEV
CCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VGREG
HCCCC
>Mature Secondary Structure
MRIAIEEYSSAWERAFLAERKRLLGTALPVDAHVEHIGSTAVTGLAAKPVIDIMIGLLRE
CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELDVLVGPVRSLGYEYLPEYETVMPFRRFFRRIGDAGVSFHLHAVVKETAFWQDHLLFR
HHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
DLLRGDDALRTAYEALKKQLSEQEWPSGDQYAAAKFGFIKEALSRGRIAGAGATGRVVYQ
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEE
VSSVPLAPGAWLRPYYLQRYGAMINAAIAALSTGEKALLAYCQKEAWLLLEMPQEIPSLK
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECHHHCCCCC
PEQLKMMIVLEALFEQVRHEEAPTLPSRLASIFTWPVPGVAQRFRDAYFPGGVIHRCVIR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHC
SGSALEFDGALLPPGINLDQAGPLAMAEEVRRVRQRAERYWRRAHEPEFPELLVQGTVEV
CCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VGREG
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]