| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is flbA [H]
Identifier: 39996647
GI number: 39996647
Start: 1699486
End: 1700907
Strand: Direct
Name: flbA [H]
Synonym: GSU1547
Alternate gene names: 39996647
Gene position: 1699486-1700907 (Clockwise)
Preceding gene: 39996646
Following gene: 39996648
Centisome position: 44.56
GC content: 67.44
Gene sequence:
>1422_bases ATGTCCATGAACAGCGAACCCACACCCGCCGAAGCATTCTTTCTGGAAGGAAACCGCCTGCTGGCGGCTAGCGAGTGCCG CGCCGCGGAGGCCTGTTTCCGCGAGGCACTCGCGCTTGCGCCGGATTTTGCCGAGGCCCATGCCAATCTCGGCATGCTGC TGGACCAGGAGGGGATGGCGGCCGAGGCGGAGCGCCAGTACCGGCTGGCCTTGGCGCTGAATCCCCGCCTGGGGCATACG CATTCCAACCTGGGTGTGCTGCTGGCGAACCAGAAGCGGTTCGAGGAGGCGGAGAGCGCGTACTTGAGCGCCATCGAGCT TGAGCCGGACAGCCCGGCGGCGTGGTCCAACCTGGGGGTGCTGCAGGCCTGCCGGAAGCAGGAACGGGAGGCGGAGGAAA GTTATCGCACGGCCCTGCGGCTGGACCCGGACTATCACCGGGCATCGTTCAACCTCAGTTACCTGCTGCTGCGCCAGGGC CGCTTCGACGAGGGGTGGTCCCTGCTGGAGAGCCGGAACCGGCGCTGGTTCGCCCGGCTGGAGGAGCATCTGCCGTGCCC CCGCTGGCGCGGCGAGGATCTGCAGGGGCGCTCCCTGTTGATCGGCCTGGAGGCTGGGCATGGGGATATGATCCAGTTCT GCCGCTACGCGCCGCTTCTCAAGGACCGGGGGGCGGCCCGGATCACCCTGGTGTGCCACGTGGCGCTGAAAGACCTCTTG AAGACCCTTGACGGTGTTGATACTGTTATCTCCTTTGACGAGATCCTGCCGGATGATGCGTGGGACTTCTGGACCCCGGC CATGAGCATCCCCTGTTATTGCCGGACCCGTCTCGATTCGATCCCCGCCCGCATCCCGTACCTGCACGCCGATCCCGGTC TGGCCGAGCAGTGGGCGGCTATGCTGGAGCGGGAATGGGCCGGGCCGGAAATGCGGATCGGCCTAGCGTGGAAGGGAAAT CCCCATTTCGAGAACGATGGGGACCGTTCCCTGCCGCACCTGAAGACCCTGGAGCCACTTGGCGCCGTGGCCGGGGTGCG GTTCTTCAGCCTGCAGAAAGGGGCGGGCGAGGAAGAGGCGGCCCAGCCACCCGCCGGCCTGCCCGTGGTGAACCTGATGC GGCATATTGCCGGCTTTGCCGACACCGCCGCCCTGGTGGCCAACCTGGATCTGGTCATTACCGTGGATACCGCCGTGGCT CATCTGGCAGGGGCGCTGGGCACGGAGTGCTGGGTGCTCCTGCCGGAGTACCGGACCGATTGGCGCTGGCTCACCGGCCG GACCGATTCGCCCTGGTATCCCGGGGTCATGCGCCTGTTCCGCCAGCCCCGCGTGGGAGACTGGGAGACGGTGGTGGCCG AGGTGGGGGAGGCGCTCCGGTTGTTTGCCGCACGTCCCCGCAGCCCGCGGGGGACGCGTTGA
Upstream 100 bases:
>100_bases TTGCTCGGGCTCAAGCCATGATTGCCCGGTCGATGAGATACGCTACGAAGTTGCGAAGTTAGGTTAACCCAGACTCCACA CCAGCGAGCCGTTATCACCA
Downstream 100 bases:
>100_bases GCGGCATGATCACGCCTTGAGCCTGATCATCCATGCGTACTGCAGGGGGAACCGGCGGGCGGGATGGCCCGGAGAATAGG GCGGAAGGGGGATATGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSMNSEPTPAEAFFLEGNRLLAASECRAAEACFREALALAPDFAEAHANLGMLLDQEGMAAEAERQYRLALALNPRLGHT HSNLGVLLANQKRFEEAESAYLSAIELEPDSPAAWSNLGVLQACRKQEREAEESYRTALRLDPDYHRASFNLSYLLLRQG RFDEGWSLLESRNRRWFARLEEHLPCPRWRGEDLQGRSLLIGLEAGHGDMIQFCRYAPLLKDRGAARITLVCHVALKDLL KTLDGVDTVISFDEILPDDAWDFWTPAMSIPCYCRTRLDSIPARIPYLHADPGLAEQWAAMLEREWAGPEMRIGLAWKGN PHFENDGDRSLPHLKTLEPLGAVAGVRFFSLQKGAGEEEAAQPPAGLPVVNLMRHIAGFADTAALVANLDLVITVDTAVA HLAGALGTECWVLLPEYRTDWRWLTGRTDSPWYPGVMRLFRQPRVGDWETVVAEVGEALRLFAARPRSPRGTR
Sequences:
>Translated_473_residues MSMNSEPTPAEAFFLEGNRLLAASECRAAEACFREALALAPDFAEAHANLGMLLDQEGMAAEAERQYRLALALNPRLGHT HSNLGVLLANQKRFEEAESAYLSAIELEPDSPAAWSNLGVLQACRKQEREAEESYRTALRLDPDYHRASFNLSYLLLRQG RFDEGWSLLESRNRRWFARLEEHLPCPRWRGEDLQGRSLLIGLEAGHGDMIQFCRYAPLLKDRGAARITLVCHVALKDLL KTLDGVDTVISFDEILPDDAWDFWTPAMSIPCYCRTRLDSIPARIPYLHADPGLAEQWAAMLEREWAGPEMRIGLAWKGN PHFENDGDRSLPHLKTLEPLGAVAGVRFFSLQKGAGEEEAAQPPAGLPVVNLMRHIAGFADTAALVANLDLVITVDTAVA HLAGALGTECWVLLPEYRTDWRWLTGRTDSPWYPGVMRLFRQPRVGDWETVVAEVGEALRLFAARPRSPRGTR >Mature_472_residues SMNSEPTPAEAFFLEGNRLLAASECRAAEACFREALALAPDFAEAHANLGMLLDQEGMAAEAERQYRLALALNPRLGHTH SNLGVLLANQKRFEEAESAYLSAIELEPDSPAAWSNLGVLQACRKQEREAEESYRTALRLDPDYHRASFNLSYLLLRQGR FDEGWSLLESRNRRWFARLEEHLPCPRWRGEDLQGRSLLIGLEAGHGDMIQFCRYAPLLKDRGAARITLVCHVALKDLLK TLDGVDTVISFDEILPDDAWDFWTPAMSIPCYCRTRLDSIPARIPYLHADPGLAEQWAAMLEREWAGPEMRIGLAWKGNP HFENDGDRSLPHLKTLEPLGAVAGVRFFSLQKGAGEEEAAQPPAGLPVVNLMRHIAGFADTAALVANLDLVITVDTAVAH LAGALGTECWVLLPEYRTDWRWLTGRTDSPWYPGVMRLFRQPRVGDWETVVAEVGEALRLFAARPRSPRGTR
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI118766330, Length=136, Percent_Identity=38.9705882352941, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI118766328, Length=136, Percent_Identity=38.9705882352941, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI32307150, Length=163, Percent_Identity=34.9693251533742, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI32307148, Length=163, Percent_Identity=34.9693251533742, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI301336134, Length=171, Percent_Identity=28.6549707602339, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI83415184, Length=140, Percent_Identity=32.8571428571429, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI22749211, Length=148, Percent_Identity=32.4324324324324, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115532692, Length=158, Percent_Identity=34.8101265822785, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115532690, Length=158, Percent_Identity=34.8101265822785, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI25147174, Length=129, Percent_Identity=34.8837209302326, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI17647755, Length=152, Percent_Identity=32.8947368421053, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24585827, Length=152, Percent_Identity=32.8947368421053, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24585829, Length=152, Percent_Identity=32.8947368421053, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24647123, Length=136, Percent_Identity=31.6176470588235, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52902; Mature: 52770
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMNSEPTPAEAFFLEGNRLLAASECRAAEACFREALALAPDFAEAHANLGMLLDQEGMA CCCCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCC AEAERQYRLALALNPRLGHTHSNLGVLLANQKRFEEAESAYLSAIELEPDSPAAWSNLGV HHHCCCEEEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHEEEEEECCCCCCCHHHHHH LQACRKQEREAEESYRTALRLDPDYHRASFNLSYLLLRQGRFDEGWSLLESRNRRWFARL HHHHHHHHHHHHHHHHHHEECCCCHHHHCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHH EEHLPCPRWRGEDLQGRSLLIGLEAGHGDMIQFCRYAPLLKDRGAARITLVCHVALKDLL HHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCHHHCCCCEEEEEHHHHHHHHHH KTLDGVDTVISFDEILPDDAWDFWTPAMSIPCYCRTRLDSIPARIPYLHADPGLAEQWAA HHHCCHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCEEECCCCHHHHHHH MLEREWAGPEMRIGLAWKGNPHFENDGDRSLPHLKTLEPLGAVAGVRFFSLQKGAGEEEA HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHH AQPPAGLPVVNLMRHIAGFADTAALVANLDLVITVDTAVAHLAGALGTECWVLLPEYRTD CCCCCCCCHHHHHHHHHCHHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCEEEEECCCCCC WRWLTGRTDSPWYPGVMRLFRQPRVGDWETVVAEVGEALRLFAARPRSPRGTR CEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SMNSEPTPAEAFFLEGNRLLAASECRAAEACFREALALAPDFAEAHANLGMLLDQEGMA CCCCCCCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCC AEAERQYRLALALNPRLGHTHSNLGVLLANQKRFEEAESAYLSAIELEPDSPAAWSNLGV HHHCCCEEEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHEEEEEECCCCCCCHHHHHH LQACRKQEREAEESYRTALRLDPDYHRASFNLSYLLLRQGRFDEGWSLLESRNRRWFARL HHHHHHHHHHHHHHHHHHEECCCCHHHHCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHH EEHLPCPRWRGEDLQGRSLLIGLEAGHGDMIQFCRYAPLLKDRGAARITLVCHVALKDLL HHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCHHHCCCCEEEEEHHHHHHHHHH KTLDGVDTVISFDEILPDDAWDFWTPAMSIPCYCRTRLDSIPARIPYLHADPGLAEQWAA HHHCCHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCEEECCCCHHHHHHH MLEREWAGPEMRIGLAWKGNPHFENDGDRSLPHLKTLEPLGAVAGVRFFSLQKGAGEEEA HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHH AQPPAGLPVVNLMRHIAGFADTAALVANLDLVITVDTAVAHLAGALGTECWVLLPEYRTD CCCCCCCCHHHHHHHHHCHHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCEEEEECCCCCC WRWLTGRTDSPWYPGVMRLFRQPRVGDWETVVAEVGEALRLFAARPRSPRGTR CEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]