| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996643
Identifier: 39996643
GI number: 39996643
Start: 1696802
End: 1697134
Strand: Direct
Name: 39996643
Synonym: GSU1543
Alternate gene names: NA
Gene position: 1696802-1697134 (Clockwise)
Preceding gene: 39996641
Following gene: 39996644
Centisome position: 44.49
GC content: 51.95
Gene sequence:
>333_bases ATGTTCAGCTCCTATAGGTTCTGTGCGAGGCGGATTGCCGCCTTGATATCCCGAGACTGGCTGCCTTTATCGCCGCCGGC CAAATTCGCTTCCTCGCTGGAAGAAATAAACTCGGTAACCAGGACCGTAGTCGATACGCATTTCCGAGATTCCATCGCCG ACCGGTTTGACGTCTCCGGGATTTCCGGACGCAAGCCGCTCAATCCTCACGAGGACCCGAGCCTTGGCCTTTACATCACG AAGATTGTCAAGCCATTTGGCAAACAGTTCGGTTTTGCGGATTTCAATCATGATTATACTGTAGCCAGTTGGCTACAAGC TGTCAACCCATAA
Upstream 100 bases:
>100_bases GCCATTAGCCTCTTCGAGGGAGGCTTCAAGGTAGGCGGCCATTTCCTCCGGAGTACGGAGATGTTCGGCGACGTCATAGC GACTGGTTGCGGTTTTGGTC
Downstream 100 bases:
>100_bases TACAGCAGTAACCATGCTCAGCCGTTGGACAGACCCGCAAGGGGCGGGGCAGCCTCAGTAAGGTGAACATTGTGAAGCGA TTGACCCTGTCGACATCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MFSSYRFCARRIAALISRDWLPLSPPAKFASSLEEINSVTRTVVDTHFRDSIADRFDVSGISGRKPLNPHEDPSLGLYIT KIVKPFGKQFGFADFNHDYTVASWLQAVNP
Sequences:
>Translated_110_residues MFSSYRFCARRIAALISRDWLPLSPPAKFASSLEEINSVTRTVVDTHFRDSIADRFDVSGISGRKPLNPHEDPSLGLYIT KIVKPFGKQFGFADFNHDYTVASWLQAVNP >Mature_110_residues MFSSYRFCARRIAALISRDWLPLSPPAKFASSLEEINSVTRTVVDTHFRDSIADRFDVSGISGRKPLNPHEDPSLGLYIT KIVKPFGKQFGFADFNHDYTVASWLQAVNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12405; Mature: 12405
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSYRFCARRIAALISRDWLPLSPPAKFASSLEEINSVTRTVVDTHFRDSIADRFDVSG CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ISGRKPLNPHEDPSLGLYITKIVKPFGKQFGFADFNHDYTVASWLQAVNP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MFSSYRFCARRIAALISRDWLPLSPPAKFASSLEEINSVTRTVVDTHFRDSIADRFDVSG CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ISGRKPLNPHEDPSLGLYITKIVKPFGKQFGFADFNHDYTVASWLQAVNP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA