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The map label for this gene is 39996642

Identifier: 39996642

GI number: 39996642

Start: 1696510

End: 1696803

Strand: Reverse

Name: 39996642

Synonym: GSU1542

Alternate gene names: NA

Gene position: 1696803-1696510 (Counterclockwise)

Preceding gene: 39996650

Following gene: 39996637

Centisome position: 44.49

GC content: 54.76

Gene sequence:

>294_bases
ATGACCAAAACCGCAACCAGTCGCTATGACGTCGCCGAACATCTCCGTACTCCGGAGGAAATGGCCGCCTACCTTGAAGC
CTCCCTCGAAGAGGCTAATGGCGATGCGACCTTCATCGCCAAGGCACTCGGAGACATAGCCCGCGCCAAGGGGATGTCGC
AGGTTGCACGAGATGCCGGTCTTTCCCGCGAAAGTCTTTATAAGGCACTTTCAGGAGAGCGGGTTCCCAGCTTTGATACC
ATCCTTAAAATCATTGCGGCACTTGGACTTAAACTGCACGCAGAAGCCAGGTAA

Upstream 100 bases:

>100_bases
TTCCAGCGAGGAAGCGAATTTGGCCGGCGGCGATAAAGGCAGCCAGTCTCGGGATATCAAGGCGGCAATCCGCCTCGCAC
AGAACCTATAGGAGCTGAAC

Downstream 100 bases:

>100_bases
CCTGCTGATAGCAGGAACTCCTGAGGGTCGGACCACGCTAACCAACTGGAACTACATCGTAATCGTCCCAAAAGAATGCA
TTTTCAGGGCTTAGAACCTC

Product: Cro/CI family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MTKTATSRYDVAEHLRTPEEMAAYLEASLEEANGDATFIAKALGDIARAKGMSQVARDAGLSRESLYKALSGERVPSFDT
ILKIIAALGLKLHAEAR

Sequences:

>Translated_97_residues
MTKTATSRYDVAEHLRTPEEMAAYLEASLEEANGDATFIAKALGDIARAKGMSQVARDAGLSRESLYKALSGERVPSFDT
ILKIIAALGLKLHAEAR
>Mature_96_residues
TKTATSRYDVAEHLRTPEEMAAYLEASLEEANGDATFIAKALGDIARAKGMSQVARDAGLSRESLYKALSGERVPSFDTI
LKIIAALGLKLHAEAR

Specific function: Unknown

COG id: COG3636

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014057
- InterPro:   IPR001387 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 10452; Mature: 10321

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTATSRYDVAEHLRTPEEMAAYLEASLEEANGDATFIAKALGDIARAKGMSQVARDAG
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
LSRESLYKALSGERVPSFDTILKIIAALGLKLHAEAR
CCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHCCCCC
>Mature Secondary Structure 
TKTATSRYDVAEHLRTPEEMAAYLEASLEEANGDATFIAKALGDIARAKGMSQVARDAG
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
LSRESLYKALSGERVPSFDTILKIIAALGLKLHAEAR
CCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]