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The map label for this gene is slyA [C]

Identifier: 39996583

GI number: 39996583

Start: 1623741

End: 1624190

Strand: Reverse

Name: slyA [C]

Synonym: GSU1483

Alternate gene names: 39996583

Gene position: 1624190-1623741 (Counterclockwise)

Preceding gene: 39996584

Following gene: 39996582

Centisome position: 42.58

GC content: 58.22

Gene sequence:

>450_bases
ATGTACGACATTGAGAACAGTATCGGCTTCCACCTTGCCAAGGCTTATCAGCGGGGCTTTGCGTTGTTCAAAGACCAACT
GGATCCCTACGGCCTGACCCCTCCGCAGTTCAGCGTCCTTGCCTTTCTCTGGAAAGAAGATGGCCAATCCCAGACGGCCC
TGTCCCAGAAGACCCTCATTGACCGGACCACCATCGGCGGTCTCGTTGACCGGCTCGAAAAGCTCGGTCTGGTCAAGCGG
CAGCCCCACCCCGAAGACCGCCGCGCCTATCGCATCTGCCTCACCCAACGGGGCATGACACTCGAACACGAACTCTGCGC
CACTGCGGCGGAGGTGCTTGCCCGCTTTCTCGCTCCCCTATCAGAAGACGAACAGAACAGTCTGCATCATCTCCTGGAAA
AAATCAGGACCGCCCCGGAGAATCGCCATGAAACCACTACCAATCCGTAG

Upstream 100 bases:

>100_bases
CCTGCACTGCCAAGCAGACATCGACAGCCCAGGCACGCATTGACAGTATACTGATTATCTGTACAATGACTGTCATTGTA
CGCAGCGATCGGATGCCAGC

Downstream 100 bases:

>100_bases
CATCCCCTTCCTGATCCTTGCGCTCTGTGCAGCGACGCCGGCCATGGCCAGCGCGCTTTCACTCAAAGAATGCCTGAGTC
TGGCCGCGGCCGGCAACTAC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulator TrmB; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family; HTH-Type Transcriptional Regulator; Transcription Regulator MarR Family; Transcriptional Regulator Marr Family Protein; Transcriptional Regulatory Protein; Transcriptional Regulator MarR; Transcriptional Regulator Protein Marr Family; Transcription Regulator Protein; Transcription Regulator Protein MarR Family; MarR Family Regulatory Helix-Turn-Helix; MarR Family Transcriptional Regulator Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MYDIENSIGFHLAKAYQRGFALFKDQLDPYGLTPPQFSVLAFLWKEDGQSQTALSQKTLIDRTTIGGLVDRLEKLGLVKR
QPHPEDRRAYRICLTQRGMTLEHELCATAAEVLARFLAPLSEDEQNSLHHLLEKIRTAPENRHETTTNP

Sequences:

>Translated_149_residues
MYDIENSIGFHLAKAYQRGFALFKDQLDPYGLTPPQFSVLAFLWKEDGQSQTALSQKTLIDRTTIGGLVDRLEKLGLVKR
QPHPEDRRAYRICLTQRGMTLEHELCATAAEVLARFLAPLSEDEQNSLHHLLEKIRTAPENRHETTTNP
>Mature_149_residues
MYDIENSIGFHLAKAYQRGFALFKDQLDPYGLTPPQFSVLAFLWKEDGQSQTALSQKTLIDRTTIGGLVDRLEKLGLVKR
QPHPEDRRAYRICLTQRGMTLEHELCATAAEVLARFLAPLSEDEQNSLHHLLEKIRTAPENRHETTTNP

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17001; Mature: 17001

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDIENSIGFHLAKAYQRGFALFKDQLDPYGLTPPQFSVLAFLWKEDGQSQTALSQKTLI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
DRTTIGGLVDRLEKLGLVKRQPHPEDRRAYRICLTQRGMTLEHELCATAAEVLARFLAPL
HHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
SEDEQNSLHHLLEKIRTAPENRHETTTNP
CCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MYDIENSIGFHLAKAYQRGFALFKDQLDPYGLTPPQFSVLAFLWKEDGQSQTALSQKTLI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
DRTTIGGLVDRLEKLGLVKRQPHPEDRRAYRICLTQRGMTLEHELCATAAEVLARFLAPL
HHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
SEDEQNSLHHLLEKIRTAPENRHETTTNP
CCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA