| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996573
Identifier: 39996573
GI number: 39996573
Start: 1615103
End: 1615840
Strand: Direct
Name: 39996573
Synonym: GSU1473
Alternate gene names: NA
Gene position: 1615103-1615840 (Clockwise)
Preceding gene: 39996572
Following gene: 39996574
Centisome position: 42.35
GC content: 51.9
Gene sequence:
>738_bases ATGGCAGACATATCAACCGTTGACCTGGTTCAGATTATCTTCTGGTTTCTGGCCGGATGCGTAAGTTTTTACTTCAGCAT CGACAACGCCCGGGTCTGGACCAGTATTTCCATGGGCTTTTTCCTCATTTTCCTGAGTCAGCTCTATGTGGTCGAGAAGG CGCTGGATGCTCCCTGGACCGCGTATACCCAGCTGGAGGCGATCCACTACATCATCGGTACCGTTGCCATCATGGTCATG ACCCACGGGTTCCAGGAGTATTATATCTTCAGTCGAACCCTTGAACTGGGAGGGAGCAAGCATGTCGTCTACCTGTCCAT TCTCGGCATTCTCGTGGGGTCAGTGGTCTTTGTCTTTGCCAATCCTGAGCCCCAGTATCCGGTGCTGCGCAACATCGCCA TGATTGAAAACAGCACCTGGGTTTTCCTGTCGCTGGTGAACATTGATATAATTCGCAAGATTTATCTGCAGATTCGAGAT TCTGTGATAGCCAACGGCTTTATCGCCTTTGGCGTCGTCTTTATCACGATCTTTCTGTGGAAAGGGTCAGAATTGTACCT TCAGGTCTACAACTGGGACTATGACTGGCAGATCATCATGCAGAACCTGGGTGTCACATTGCCGGAACAGTTCATGGGGC GCCGCCAGTTTTCCCTGATGGTTCATGATGCAGCCGGGCTTGCTTCGGGGCTGACAGCCGGCGGCACGTTCCTGTATCTT CTCAGGCTGCTGCGCTGA
Upstream 100 bases:
>100_bases CAAAACCAGGGAGATGCTGGAGACCATGAAAAACGAGATCGCAGAACGGACGAAATCACTGCTGTGACAATGCAATCGTT GGAGCGCTCGAGAGGGAACG
Downstream 100 bases:
>100_bases TCGCTGCTTCTCACATCACGTGGAGAAAAGGGCTGGCAAAGCCCTTTTCTCTTTTGCGGGCCACGTCACGATGCCGGAAA AGCGTGGTACACTCCTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MADISTVDLVQIIFWFLAGCVSFYFSIDNARVWTSISMGFFLIFLSQLYVVEKALDAPWTAYTQLEAIHYIIGTVAIMVM THGFQEYYIFSRTLELGGSKHVVYLSILGILVGSVVFVFANPEPQYPVLRNIAMIENSTWVFLSLVNIDIIRKIYLQIRD SVIANGFIAFGVVFITIFLWKGSELYLQVYNWDYDWQIIMQNLGVTLPEQFMGRRQFSLMVHDAAGLASGLTAGGTFLYL LRLLR
Sequences:
>Translated_245_residues MADISTVDLVQIIFWFLAGCVSFYFSIDNARVWTSISMGFFLIFLSQLYVVEKALDAPWTAYTQLEAIHYIIGTVAIMVM THGFQEYYIFSRTLELGGSKHVVYLSILGILVGSVVFVFANPEPQYPVLRNIAMIENSTWVFLSLVNIDIIRKIYLQIRD SVIANGFIAFGVVFITIFLWKGSELYLQVYNWDYDWQIIMQNLGVTLPEQFMGRRQFSLMVHDAAGLASGLTAGGTFLYL LRLLR >Mature_244_residues ADISTVDLVQIIFWFLAGCVSFYFSIDNARVWTSISMGFFLIFLSQLYVVEKALDAPWTAYTQLEAIHYIIGTVAIMVMT HGFQEYYIFSRTLELGGSKHVVYLSILGILVGSVVFVFANPEPQYPVLRNIAMIENSTWVFLSLVNIDIIRKIYLQIRDS VIANGFIAFGVVFITIFLWKGSELYLQVYNWDYDWQIIMQNLGVTLPEQFMGRRQFSLMVHDAAGLASGLTAGGTFLYLL RLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27953; Mature: 27822
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADISTVDLVQIIFWFLAGCVSFYFSIDNARVWTSISMGFFLIFLSQLYVVEKALDAPWT CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCH AYTQLEAIHYIIGTVAIMVMTHGFQEYYIFSRTLELGGSKHVVYLSILGILVGSVVFVFA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEE NPEPQYPVLRNIAMIENSTWVFLSLVNIDIIRKIYLQIRDSVIANGFIAFGVVFITIFLW CCCCCCHHHHHHHHEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGSELYLQVYNWDYDWQIIMQNLGVTLPEQFMGRRQFSLMVHDAAGLASGLTAGGTFLYL CCCEEEEEEECCCCCHHHHHHHCCCCCCHHHCCCHHHEEEEECHHHHHCCCCCCHHHHHH LRLLR HHHHC >Mature Secondary Structure ADISTVDLVQIIFWFLAGCVSFYFSIDNARVWTSISMGFFLIFLSQLYVVEKALDAPWT CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCH AYTQLEAIHYIIGTVAIMVMTHGFQEYYIFSRTLELGGSKHVVYLSILGILVGSVVFVFA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEE NPEPQYPVLRNIAMIENSTWVFLSLVNIDIIRKIYLQIRDSVIANGFIAFGVVFITIFLW CCCCCCHHHHHHHHEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGSELYLQVYNWDYDWQIIMQNLGVTLPEQFMGRRQFSLMVHDAAGLASGLTAGGTFLYL CCCEEEEEEECCCCCHHHHHHHCCCCCCHHHCCCHHHEEEEECHHHHHCCCCCCHHHHHH LRLLR HHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA