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The map label for this gene is 39996538

Identifier: 39996538

GI number: 39996538

Start: 1576188

End: 1577066

Strand: Direct

Name: 39996538

Synonym: GSU1438

Alternate gene names: NA

Gene position: 1576188-1577066 (Clockwise)

Preceding gene: 39996537

Following gene: 39996540

Centisome position: 41.32

GC content: 60.07

Gene sequence:

>879_bases
ATGGACACCGATTGGAGTAATCTCGCCGTCAGACTTGAACGTCTGCTCGAACGGTTTGAACGGATCATTGACCGCCATGA
TCCGGTTCTTCCCCGGGATCCGGCCTTTTTCGACGGAGCCATTGCCTTCCGCTGGCGCCGGTCGGGTGAACAAGGCACGT
TCGAGCCGGTGACGCATCCCCATCTTCCCGATCCTGCCGATCTGGTTGGCATTGATCTGGTCCGCGAGGACTTGATCCGG
AATACCGCCCAGTTCATGGACGGCTACCCCGCCAACAACGTCTTGCTGTGGGGGGAGCGGGGCACCGGCAAATCGACCTG
CGTCAAGGGAATGCTCCGGCTGTTTGCGGACCGTGGACTGCGGCTCGTGGAGGTCCAGCGGGACGATCTGATGAGCCTGC
CGGCTCTCATTGCAGCCCTGAGATCGGTGCCGCGGCGCTTCATCCTTTTCTGTGACGATCTCTCGTTCGGCGAAGGGGAG
GGAGGATACCGGGAGCTCAAGGCTCTTCTTGAAGGCAGCATCGAGGCAAAGCCGACGAATATCCTGTTCTATGCCACCTC
TAACCGTCGCCACCTGCTTCCCGAGCGGATGGAGGATAATCTCAGCAGCGAGATCCACCCCGAAGAGGCCGTGTCCGAAA
AGCTCTCCTTGGCCGACCGGTTCGGCATGGCGCTGGGGTTCTATCCGTTCAGCCAGGACGTATATCTGTCCATCGTTGAG
CGATATGCGGAAAAATTCGCTCTTCCCATGGAGCGGGAGGCGCTCCGGAAAGAAGCGCATCTGTGGGCCATGTACCGTGG
AAGCCGGTCGGGACGCTCTGCCCGTCAGTTTATCGATGATCTTGCCGGGCGGCTCGGTGTCAGGCTCAACGATCGTTGA

Upstream 100 bases:

>100_bases
GGATTCAACGGGTGCAGGCCGAGATCGCCAAGCTTCCTCCCCAGCGCTATCTGACGGACGAGACGGAATTCAAGAAAATA
AAGGGGCGGCTCAAGTAACC

Downstream 100 bases:

>100_bases
TGGCTACATGCGGAGCAACGGTCCATGGGTACAACAGTAGTGCGAAGCAATGATACGATGCTGGAGGAAGAGGCATGAGT
CAGCCCGGTCCCGACGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MDTDWSNLAVRLERLLERFERIIDRHDPVLPRDPAFFDGAIAFRWRRSGEQGTFEPVTHPHLPDPADLVGIDLVREDLIR
NTAQFMDGYPANNVLLWGERGTGKSTCVKGMLRLFADRGLRLVEVQRDDLMSLPALIAALRSVPRRFILFCDDLSFGEGE
GGYRELKALLEGSIEAKPTNILFYATSNRRHLLPERMEDNLSSEIHPEEAVSEKLSLADRFGMALGFYPFSQDVYLSIVE
RYAEKFALPMEREALRKEAHLWAMYRGSRSGRSARQFIDDLAGRLGVRLNDR

Sequences:

>Translated_292_residues
MDTDWSNLAVRLERLLERFERIIDRHDPVLPRDPAFFDGAIAFRWRRSGEQGTFEPVTHPHLPDPADLVGIDLVREDLIR
NTAQFMDGYPANNVLLWGERGTGKSTCVKGMLRLFADRGLRLVEVQRDDLMSLPALIAALRSVPRRFILFCDDLSFGEGE
GGYRELKALLEGSIEAKPTNILFYATSNRRHLLPERMEDNLSSEIHPEEAVSEKLSLADRFGMALGFYPFSQDVYLSIVE
RYAEKFALPMEREALRKEAHLWAMYRGSRSGRSARQFIDDLAGRLGVRLNDR
>Mature_292_residues
MDTDWSNLAVRLERLLERFERIIDRHDPVLPRDPAFFDGAIAFRWRRSGEQGTFEPVTHPHLPDPADLVGIDLVREDLIR
NTAQFMDGYPANNVLLWGERGTGKSTCVKGMLRLFADRGLRLVEVQRDDLMSLPALIAALRSVPRRFILFCDDLSFGEGE
GGYRELKALLEGSIEAKPTNILFYATSNRRHLLPERMEDNLSSEIHPEEAVSEKLSLADRFGMALGFYPFSQDVYLSIVE
RYAEKFALPMEREALRKEAHLWAMYRGSRSGRSARQFIDDLAGRLGVRLNDR

Specific function: Unknown

COG id: COG2607

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33427; Mature: 33427

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTDWSNLAVRLERLLERFERIIDRHDPVLPRDPAFFDGAIAFRWRRSGEQGTFEPVTHP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
HLPDPADLVGIDLVREDLIRNTAQFMDGYPANNVLLWGERGTGKSTCVKGMLRLFADRGL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
RLVEVQRDDLMSLPALIAALRSVPRRFILFCDDLSFGEGEGGYRELKALLEGSIEAKPTN
EEEEECHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCE
ILFYATSNRRHLLPERMEDNLSSEIHPEEAVSEKLSLADRFGMALGFYPFSQDVYLSIVE
EEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RYAEKFALPMEREALRKEAHLWAMYRGSRSGRSARQFIDDLAGRLGVRLNDR
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDTDWSNLAVRLERLLERFERIIDRHDPVLPRDPAFFDGAIAFRWRRSGEQGTFEPVTHP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
HLPDPADLVGIDLVREDLIRNTAQFMDGYPANNVLLWGERGTGKSTCVKGMLRLFADRGL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
RLVEVQRDDLMSLPALIAALRSVPRRFILFCDDLSFGEGEGGYRELKALLEGSIEAKPTN
EEEEECHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCE
ILFYATSNRRHLLPERMEDNLSSEIHPEEAVSEKLSLADRFGMALGFYPFSQDVYLSIVE
EEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RYAEKFALPMEREALRKEAHLWAMYRGSRSGRSARQFIDDLAGRLGVRLNDR
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA