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The map label for this gene is yfgC [H]

Identifier: 39996537

GI number: 39996537

Start: 1575391

End: 1576185

Strand: Direct

Name: yfgC [H]

Synonym: GSU1437

Alternate gene names: 39996537

Gene position: 1575391-1576185 (Clockwise)

Preceding gene: 39996536

Following gene: 39996538

Centisome position: 41.3

GC content: 57.99

Gene sequence:

>795_bases
ATGAAGTTGGCGAAATGGTTGCTTGGACCGCTGGCGGCACTGGGTATCCTTGCCGGTTGTGCCACGAGCATGACCGACAT
CAAGGGTTTCAACATGATCTCCATCGAGCAGGAGAAGGAATTGGGCAACAAGTTTGCCGTGGAGATCGAAAAGCAGCAGC
AACCCGTGAACGACCCGGAGGTCCAGCGTTACGTGGACAAGGTAGGCAAGCGGTTGCTGTCCGGTGCCCGGGCAGTGGAA
TTCGACTACGTCTTCAAGGTGGTGAAGGATGACAGCGTCAATGCGTTCGCCATCCCCGGCGGACGTGTGTATGTGCACAC
GGGCCTGCTGAAGGCGGCTGACAACGAAACGGAGCTGGCCGGCGTCCTGGCCCACGAGATCAACCATGCGGTCGCCCGTC
ACGGCACTAGGCAGATGACTCAGGAGTATGGCTATTCTCTGGTCCTTTCCCTTGTCCTGGGGGACAACCCCAACATGTTG
GCGCAGCTGGCCGGCCAACTCTTCGGCAAGGCGGGTATGATGTCATACAGCCGGGAATACGAAAACCAGGCAGATTTCCT
CGGCGTGGAGACCATGTACAAGGCCGGATATAACCCCAACGGCCTGACGAGCTTTTTCCAGAAGCTGAACGCGATGGACG
GCGGTACCCAGAGTAACGTGGCCCGGTTCTTTTCGACCCATCCCCTTACGTCGGAGCGGATTCAACGGGTGCAGGCCGAG
ATCGCCAAGCTTCCTCCCCAGCGCTATCTGACGGACGAGACGGAATTCAAGAAAATAAAGGGGCGGCTCAAGTAA

Upstream 100 bases:

>100_bases
AGCGGATCAAGGCATTCTGGGCCATCGAAGGGGACGGTTATCTCGCCTGGGAGCGGGAGTGCTCGTTGAAACAGTGGTGA
ACGGATCAAGGAGGATGGCT

Downstream 100 bases:

>100_bases
CCATGGACACCGATTGGAGTAATCTCGCCGTCAGACTTGAACGTCTGCTCGAACGGTTTGAACGGATCATTGACCGCCAT
GATCCGGTTCTTCCCCGGGA

Product: M48 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKLAKWLLGPLAALGILAGCATSMTDIKGFNMISIEQEKELGNKFAVEIEKQQQPVNDPEVQRYVDKVGKRLLSGARAVE
FDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAADNETELAGVLAHEINHAVARHGTRQMTQEYGYSLVLSLVLGDNPNML
AQLAGQLFGKAGMMSYSREYENQADFLGVETMYKAGYNPNGLTSFFQKLNAMDGGTQSNVARFFSTHPLTSERIQRVQAE
IAKLPPQRYLTDETEFKKIKGRLK

Sequences:

>Translated_264_residues
MKLAKWLLGPLAALGILAGCATSMTDIKGFNMISIEQEKELGNKFAVEIEKQQQPVNDPEVQRYVDKVGKRLLSGARAVE
FDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAADNETELAGVLAHEINHAVARHGTRQMTQEYGYSLVLSLVLGDNPNML
AQLAGQLFGKAGMMSYSREYENQADFLGVETMYKAGYNPNGLTSFFQKLNAMDGGTQSNVARFFSTHPLTSERIQRVQAE
IAKLPPQRYLTDETEFKKIKGRLK
>Mature_264_residues
MKLAKWLLGPLAALGILAGCATSMTDIKGFNMISIEQEKELGNKFAVEIEKQQQPVNDPEVQRYVDKVGKRLLSGARAVE
FDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAADNETELAGVLAHEINHAVARHGTRQMTQEYGYSLVLSLVLGDNPNML
AQLAGQLFGKAGMMSYSREYENQADFLGVETMYKAGYNPNGLTSFFQKLNAMDGGTQSNVARFFSTHPLTSERIQRVQAE
IAKLPPQRYLTDETEFKKIKGRLK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=242, Percent_Identity=30.5785123966942, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI87081800, Length=263, Percent_Identity=29.277566539924, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI87082185, Length=253, Percent_Identity=25.296442687747, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322940, Length=185, Percent_Identity=31.3513513513514, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 29270; Mature: 29270

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAKWLLGPLAALGILAGCATSMTDIKGFNMISIEQEKELGNKFAVEIEKQQQPVNDPE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCEEEEEHHHCCCCCCHH
VQRYVDKVGKRLLSGARAVEFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAADNETELA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCEEEEEECHHHCCCCCHHHH
GVLAHEINHAVARHGTRQMTQEYGYSLVLSLVLGDNPNMLAQLAGQLFGKAGMMSYSREY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ENQADFLGVETMYKAGYNPNGLTSFFQKLNAMDGGTQSNVARFFSTHPLTSERIQRVQAE
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
IAKLPPQRYLTDETEFKKIKGRLK
HHHCCCHHHCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKLAKWLLGPLAALGILAGCATSMTDIKGFNMISIEQEKELGNKFAVEIEKQQQPVNDPE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCEEEEEHHHCCCCCCHH
VQRYVDKVGKRLLSGARAVEFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAADNETELA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCCEEEEEECHHHCCCCCHHHH
GVLAHEINHAVARHGTRQMTQEYGYSLVLSLVLGDNPNMLAQLAGQLFGKAGMMSYSREY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ENQADFLGVETMYKAGYNPNGLTSFFQKLNAMDGGTQSNVARFFSTHPLTSERIQRVQAE
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
IAKLPPQRYLTDETEFKKIKGRLK
HHHCCCHHHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]