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The map label for this gene is 39996460

Identifier: 39996460

GI number: 39996460

Start: 1481813

End: 1484215

Strand: Direct

Name: 39996460

Synonym: GSU1358

Alternate gene names: NA

Gene position: 1481813-1484215 (Clockwise)

Preceding gene: 39996459

Following gene: 39996461

Centisome position: 38.85

GC content: 58.22

Gene sequence:

>2403_bases
TTGATCGTTTATTCCGCCACAAAAGCCAGGTTCAAAGAAGATGTCATGACCAATGACATCGGCGGCATCATCTTCAACGC
CTTCCAGAATGCAACGGGGCGAAGTACCGGCAGGGCCGAAATCGAATCGTGGATGCACTCGCTGCAGTATATGGACCGAG
TTCTCAGCGACGATGAAATCCCCCACGACGCCGGCGTCGCCATCGAGTACCACCTCCCTCAAACCTCCAAGCGTATCGAC
TTCATCCTAACCGGCCGGGACAGGGACCGGCGCGAGTCGGCCATTCTCGTTGAACTTAAGCAGTGGCAGAAGGCGGAGCT
GACCCAGAGTGACGCCATCGTTATTACCCGCTTCAAGCACGGCACCGCCGAAACCCTTCACCCCTCCTACCAAGCCTGGT
CTTACAAGCGCCTCCTTGAAGACTTCAACCAGACCGTACAAGAAGAACATATCGGTCTCTACCCCTGCGCCTACCTGCAT
AACTACGAAGACGACGGGGTAATTACCCATCCGTTTTACAGCGACCATATCAAGCGGGCACCGATTTTCCTCAAGCCCGA
TGCCCTGAAACTGCAGCAGTTCATCAAGACTCACGTCAAATTCGGCGATACGACCCGGATTATGTACCGGATCGAGCACG
GCAAGATCAAGCCGTCCAAGAACCTGGCCGATGAGCTTGCTTCAATGCTCAAGGGCAACCGGGAATTCGTCCTGATCGAC
GACCAGAAAGTGGTGTTCGAGAAGGCGAAACGGTTGGCAGAGCAGGCATCGGAGCACACCAAAAAGGTCCTGATCGTCGA
GGGAGGGCCGGGCACTGGTAAGTCGGTTCTAGCGATTAACCTCCTGGTGGCGCTTACCGGCAAGGATCATGTCGTCCAGT
ACGTCACCCGCAACTCGGCCCCTCGGCTCGTCTACGAGGCCAAGCTTACCGGCCACTTCCGGAAAACTCATATTTCCAAC
ATGTTATCCGGTTCCGGCTCGTATCACGCGACTCCACCCAACACGTTCGGTTGCCTCATCGTGGACGAGGCGCACCGGTT
GAACGAGAAGTCCGGAATGTTCAGCCACCTGGGGGAGAACCAGATCAAGGAGATCATCAGCGCCAGCAGGCTGAGTGTCT
TCTTCATCGACGAAGACCAGAAGGTGACCCTGAAGGACATAGGCGACAAGGAGGCGATCCGCACCTGGGCGGAGAAGCTA
GGTGCCGAAGTCGTGGAGATGAGCCTGGAGTCACAGTTTCGCTGCAATGGCTCTAACGGTTACCTGGCGTGGCTCGACAA
TACACTGCAGATTCGGGAGACGGCCAACGAGACGCTGGATACCCGTGAGTACGACTTCCGCATTGTTGATAGCCCATCCG
AACTGCACGGCCTGATCAAGGACAAGAACAAGATAAGTAACAAGGCACGTATGGTGGCAGGCTACTGCTGGGACTGGACC
AGCAAGAAGAATCCTCATTTGAAGGACATTGTCATTGGCGACTACCGGGCGACTTGGAACCTGGAGACAGACGGCCAGGC
GTGGATCATAAAGCCCGACTCCGTCAGCGAGGTGGGGTGCATTCATACCTGCCAGGGGCTGGAGGTGGACTACATCGGCG
TCATCGTCGGGCCGGATTTGGTCGTCCGCGACGGCAGTGTGCTGACCCGGCCGGCCGAGCGGTCGAGAATGGACAAGTCG
ATCCAGGGGTGGAAGAAGCTGCTCAAGGATGATCCCGAAGGTGGCGCGGCGCGGCTAGACGCCATCATCAAGAACACCTA
CCGAACCCTCATGACGCGCGGCCAGAAGGGATGCTACGTCTACTTCACAGACGAGGAGACACGCCGGTACTCCGCCGAAC
GGCTGCAGATCGGGCCGGCAGCAGAGCAGGTTGCCGAGAAACCGGTGCTGCCTGCAGACGAAGAAGCAGTGGTCCTGCCG
TTCCGCCTTCTGGGGCCAGAGCAAGCGCGGCCATACGAGAACTGCGTACCGCTCTACGACTTCAAGATCGCCGCCGGCGG
CTTCAGTGACGAGCAACAGGTGGATGATTGCGACTGGGTTGAACTGCCGGAAGAATTCCGTCCAAGGAAAGGGCTGTTTG
TGGCCCAAGTGGTGGGTGAGTCGATGAACCGGCGCATCCCGAACGGGGCCTGGTGCCTCTTCCGCATCGCCTCGGCCGGC
TCACGGAACGGCAAGGTCGTCCTCGCCTCGCACCGGGAGATAGCCGATAACGATACCGGCGGACACTACACCGTCAAGAT
TTACGAGAGCACGAAGGAGAGTTTTTCTGATGGGACGTGGCGGCATGCGTCGATCATCCTGCGGCCGGACAGTGCCTTGC
CTGGGTATGAGCCGATTGTGTTGAGCGAGGAGCAGGCGGAGGATTTGCGGGTGATTGGGGAGTTGGTGGCGGTGCTGGGG
TGA

Upstream 100 bases:

>100_bases
TCGAGAAGAGCGAAAAGAAATATCCCGTAGAAAAGGCAAAAGGGAAGAATACGAAGTACACGAAGCTGTAGGCCGATATC
CGCGTTCACAGGGGCCAGCA

Downstream 100 bases:

>100_bases
TCTTACGGCGGATTGAGGTTCAATGCGTTTAGCTCACGGCATATACGAAGCACTTCTCGATGAAGCTTTGCAGGAGGCCC
TAGCCCTGCGGCCGGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 800; Mature: 800

Protein sequence:

>800_residues
MIVYSATKARFKEDVMTNDIGGIIFNAFQNATGRSTGRAEIESWMHSLQYMDRVLSDDEIPHDAGVAIEYHLPQTSKRID
FILTGRDRDRRESAILVELKQWQKAELTQSDAIVITRFKHGTAETLHPSYQAWSYKRLLEDFNQTVQEEHIGLYPCAYLH
NYEDDGVITHPFYSDHIKRAPIFLKPDALKLQQFIKTHVKFGDTTRIMYRIEHGKIKPSKNLADELASMLKGNREFVLID
DQKVVFEKAKRLAEQASEHTKKVLIVEGGPGTGKSVLAINLLVALTGKDHVVQYVTRNSAPRLVYEAKLTGHFRKTHISN
MLSGSGSYHATPPNTFGCLIVDEAHRLNEKSGMFSHLGENQIKEIISASRLSVFFIDEDQKVTLKDIGDKEAIRTWAEKL
GAEVVEMSLESQFRCNGSNGYLAWLDNTLQIRETANETLDTREYDFRIVDSPSELHGLIKDKNKISNKARMVAGYCWDWT
SKKNPHLKDIVIGDYRATWNLETDGQAWIIKPDSVSEVGCIHTCQGLEVDYIGVIVGPDLVVRDGSVLTRPAERSRMDKS
IQGWKKLLKDDPEGGAARLDAIIKNTYRTLMTRGQKGCYVYFTDEETRRYSAERLQIGPAAEQVAEKPVLPADEEAVVLP
FRLLGPEQARPYENCVPLYDFKIAAGGFSDEQQVDDCDWVELPEEFRPRKGLFVAQVVGESMNRRIPNGAWCLFRIASAG
SRNGKVVLASHREIADNDTGGHYTVKIYESTKESFSDGTWRHASIILRPDSALPGYEPIVLSEEQAEDLRVIGELVAVLG

Sequences:

>Translated_800_residues
MIVYSATKARFKEDVMTNDIGGIIFNAFQNATGRSTGRAEIESWMHSLQYMDRVLSDDEIPHDAGVAIEYHLPQTSKRID
FILTGRDRDRRESAILVELKQWQKAELTQSDAIVITRFKHGTAETLHPSYQAWSYKRLLEDFNQTVQEEHIGLYPCAYLH
NYEDDGVITHPFYSDHIKRAPIFLKPDALKLQQFIKTHVKFGDTTRIMYRIEHGKIKPSKNLADELASMLKGNREFVLID
DQKVVFEKAKRLAEQASEHTKKVLIVEGGPGTGKSVLAINLLVALTGKDHVVQYVTRNSAPRLVYEAKLTGHFRKTHISN
MLSGSGSYHATPPNTFGCLIVDEAHRLNEKSGMFSHLGENQIKEIISASRLSVFFIDEDQKVTLKDIGDKEAIRTWAEKL
GAEVVEMSLESQFRCNGSNGYLAWLDNTLQIRETANETLDTREYDFRIVDSPSELHGLIKDKNKISNKARMVAGYCWDWT
SKKNPHLKDIVIGDYRATWNLETDGQAWIIKPDSVSEVGCIHTCQGLEVDYIGVIVGPDLVVRDGSVLTRPAERSRMDKS
IQGWKKLLKDDPEGGAARLDAIIKNTYRTLMTRGQKGCYVYFTDEETRRYSAERLQIGPAAEQVAEKPVLPADEEAVVLP
FRLLGPEQARPYENCVPLYDFKIAAGGFSDEQQVDDCDWVELPEEFRPRKGLFVAQVVGESMNRRIPNGAWCLFRIASAG
SRNGKVVLASHREIADNDTGGHYTVKIYESTKESFSDGTWRHASIILRPDSALPGYEPIVLSEEQAEDLRVIGELVAVLG
>Mature_800_residues
MIVYSATKARFKEDVMTNDIGGIIFNAFQNATGRSTGRAEIESWMHSLQYMDRVLSDDEIPHDAGVAIEYHLPQTSKRID
FILTGRDRDRRESAILVELKQWQKAELTQSDAIVITRFKHGTAETLHPSYQAWSYKRLLEDFNQTVQEEHIGLYPCAYLH
NYEDDGVITHPFYSDHIKRAPIFLKPDALKLQQFIKTHVKFGDTTRIMYRIEHGKIKPSKNLADELASMLKGNREFVLID
DQKVVFEKAKRLAEQASEHTKKVLIVEGGPGTGKSVLAINLLVALTGKDHVVQYVTRNSAPRLVYEAKLTGHFRKTHISN
MLSGSGSYHATPPNTFGCLIVDEAHRLNEKSGMFSHLGENQIKEIISASRLSVFFIDEDQKVTLKDIGDKEAIRTWAEKL
GAEVVEMSLESQFRCNGSNGYLAWLDNTLQIRETANETLDTREYDFRIVDSPSELHGLIKDKNKISNKARMVAGYCWDWT
SKKNPHLKDIVIGDYRATWNLETDGQAWIIKPDSVSEVGCIHTCQGLEVDYIGVIVGPDLVVRDGSVLTRPAERSRMDKS
IQGWKKLLKDDPEGGAARLDAIIKNTYRTLMTRGQKGCYVYFTDEETRRYSAERLQIGPAAEQVAEKPVLPADEEAVVLP
FRLLGPEQARPYENCVPLYDFKIAAGGFSDEQQVDDCDWVELPEEFRPRKGLFVAQVVGESMNRRIPNGAWCLFRIASAG
SRNGKVVLASHREIADNDTGGHYTVKIYESTKESFSDGTWRHASIILRPDSALPGYEPIVLSEEQAEDLRVIGELVAVLG

Specific function: Unknown

COG id: COG3410

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6325011, Length=381, Percent_Identity=22.3097112860892, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90269; Mature: 90269

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS00690 DEAH_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVYSATKARFKEDVMTNDIGGIIFNAFQNATGRSTGRAEIESWMHSLQYMDRVLSDDEI
CEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PHDAGVAIEYHLPQTSKRIDFILTGRDRDRRESAILVELKQWQKAELTQSDAIVITRFKH
CCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHCCCCCCEEEEEECC
GTAETLHPSYQAWSYKRLLEDFNQTVQEEHIGLYPCAYLHNYEDDGVITHPFYSDHIKRA
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCEEECCCHHHHHCCC
PIFLKPDALKLQQFIKTHVKFGDTTRIMYRIEHGKIKPSKNLADELASMLKGNREFVLID
CEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEC
DQKVVFEKAKRLAEQASEHTKKVLIVEGGPGTGKSVLAINLLVALTGKDHVVQYVTRNSA
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCEEHHHHCCCC
PRLVYEAKLTGHFRKTHISNMLSGSGSYHATPPNTFGCLIVDEAHRLNEKSGMFSHLGEN
CCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHCCHHCCHHHHCCHH
QIKEIISASRLSVFFIDEDQKVTLKDIGDKEAIRTWAEKLGAEVVEMSLESQFRCNGSNG
HHHHHHHHCCEEEEEECCCCEEEHHHCCCHHHHHHHHHHHCHHHHHHHHCCCEEECCCCC
YLAWLDNTLQIRETANETLDTREYDFRIVDSPSELHGLIKDKNKISNKARMVAGYCWDWT
EEEEECCCEEEHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHEEEEEEECCC
SKKNPHLKDIVIGDYRATWNLETDGQAWIIKPDSVSEVGCIHTCQGLEVDYIGVIVGPDL
CCCCCCCCEEEEECCEEEEEECCCCCEEEECCCCCCCCCHHEECCCCCEEEEEEEECCCE
VVRDGSVLTRPAERSRMDKSIQGWKKLLKDDPEGGAARLDAIIKNTYRTLMTRGQKGCYV
EEECCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
YFTDEETRRYSAERLQIGPAAEQVAEKPVLPADEEAVVLPFRLLGPEQARPYENCVPLYD
EEECCHHHHHHHHHEECCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCEEE
FKIAAGGFSDEQQVDDCDWVELPEEFRPRKGLFVAQVVGESMNRRIPNGAWCLFRIASAG
EEEECCCCCCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHCCCCCCCEEEEEEECCC
SRNGKVVLASHREIADNDTGGHYTVKIYESTKESFSDGTWRHASIILRPDSALPGYEPIV
CCCCEEEEEECCCCCCCCCCCEEEEEEEECCHHHCCCCCEEEEEEEEECCCCCCCCCCEE
LSEEQAEDLRVIGELVAVLG
ECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVYSATKARFKEDVMTNDIGGIIFNAFQNATGRSTGRAEIESWMHSLQYMDRVLSDDEI
CEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PHDAGVAIEYHLPQTSKRIDFILTGRDRDRRESAILVELKQWQKAELTQSDAIVITRFKH
CCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHCCCCCCEEEEEECC
GTAETLHPSYQAWSYKRLLEDFNQTVQEEHIGLYPCAYLHNYEDDGVITHPFYSDHIKRA
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCEEECCCHHHHHCCC
PIFLKPDALKLQQFIKTHVKFGDTTRIMYRIEHGKIKPSKNLADELASMLKGNREFVLID
CEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEC
DQKVVFEKAKRLAEQASEHTKKVLIVEGGPGTGKSVLAINLLVALTGKDHVVQYVTRNSA
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCEEHHHHCCCC
PRLVYEAKLTGHFRKTHISNMLSGSGSYHATPPNTFGCLIVDEAHRLNEKSGMFSHLGEN
CCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHCCHHCCHHHHCCHH
QIKEIISASRLSVFFIDEDQKVTLKDIGDKEAIRTWAEKLGAEVVEMSLESQFRCNGSNG
HHHHHHHHCCEEEEEECCCCEEEHHHCCCHHHHHHHHHHHCHHHHHHHHCCCEEECCCCC
YLAWLDNTLQIRETANETLDTREYDFRIVDSPSELHGLIKDKNKISNKARMVAGYCWDWT
EEEEECCCEEEHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHEEEEEEECCC
SKKNPHLKDIVIGDYRATWNLETDGQAWIIKPDSVSEVGCIHTCQGLEVDYIGVIVGPDL
CCCCCCCCEEEEECCEEEEEECCCCCEEEECCCCCCCCCHHEECCCCCEEEEEEEECCCE
VVRDGSVLTRPAERSRMDKSIQGWKKLLKDDPEGGAARLDAIIKNTYRTLMTRGQKGCYV
EEECCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
YFTDEETRRYSAERLQIGPAAEQVAEKPVLPADEEAVVLPFRLLGPEQARPYENCVPLYD
EEECCHHHHHHHHHEECCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCEEE
FKIAAGGFSDEQQVDDCDWVELPEEFRPRKGLFVAQVVGESMNRRIPNGAWCLFRIASAG
EEEECCCCCCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHCCCCCCCEEEEEEECCC
SRNGKVVLASHREIADNDTGGHYTVKIYESTKESFSDGTWRHASIILRPDSALPGYEPIV
CCCCEEEEEECCCCCCCCCCCEEEEEEEECCHHHCCCCCEEEEEEEEECCCCCCCCCCEE
LSEEQAEDLRVIGELVAVLG
ECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA