Click here to switch to the map view.

The map label for this gene is 39996384

Identifier: 39996384

GI number: 39996384

Start: 1397350

End: 1398942

Strand: Direct

Name: 39996384

Synonym: GSU1282

Alternate gene names: NA

Gene position: 1397350-1398942 (Clockwise)

Preceding gene: 39996383

Following gene: 39996385

Centisome position: 36.64

GC content: 59.01

Gene sequence:

>1593_bases
ATGAAAAGGATAGTGATTGGCATTGCAGCTGCTTTTGCCCTTTGTTCTGCGTCATGGGCAATGGGGGCCGATGACGCGAG
AACGGAGCCAGGCACCTGCCGCCAGATTGCGGAGTTGACCCGCAAGTACGACTCCGGCCGAGCGCTTCCGGGCGACATGG
CCGTTGACGGGCGGCCGTGTCTCAGGAGTGAGGCTGCCGACTGCCTTTTCGGTGTCCTCGAAAAGGTGCTCGCGAAGTGT
CGGTCAGAGGGAAAGGAAGCACTTGAGCCCGAAGAACGCGCCTTGATTCTCCGTCTCAGGGAAGAGCTCGACGCCGAGCT
GGAGAGCCGGCACGGTTACCACACGCTGCGGGATGAAGTCGAAGCCATGCTCGCCAAGCCTGATCTGTACGATTATGAAT
ACCGGGTTGGCGTGAATGGGTTCGTCAGAGGAGAAGGTGCCGGCTCTTTCCGGCTCCCTGACTTCAGCCAGGCCCCCGGA
CACGCTGAAGGACGTTTCCTCTATCGCGTCAAACCGTATCTTTTCTGGCATCCGGTGGCATGGCTCGATCTCCACGCCGA
GGGGCAGGGGTACGGCTTCAGCGGGGGGAGCCAGGATTACGGCAAGATTTCTCTCTACCAGGGCTTTGCCGAGATCCTCT
GCCCCCTCCGGGACGGGAATTCCCTCAAGGCCGGCCGTCAGGAGCTTGTCTACGGCAGCTCCTTCATGCTCGGGAGCGAT
TCGTTCTACAAGGGACTCGTCTATGATGCCGTGCGTTTGCGGATAACACCTCTGGCTCCGCTGACGGTCGACATCTTCGG
CGGCTGGTATGCCTCTCCCTGGTCAGACGGCACAGAGGGAGGCCTCGCCGGCGGCTATGCCACATGGAACATCAGCGACG
GTACCGGTCTGGAATTCTATGGATTTCGCGATAGCGGCTCCGCAGAACGTCATGACGGGGAACATCGGAATTCCTTCGGC
GTCAGGGCCACGGCAAAGTTCGGTCCCGTCAGCTGCGAAGTAGAACCGGTCTGGCAAACGGGACGCCTGTTCAACGGTGT
TGACGCCAACGAAAGCATCAGAGCCTGGGGTGGTCACGCCGATATCATGATTGACACTGACCTCGGAGGGATCGGCAACC
ATTTCTTTGCCGGCGCCGCCTATGGATCGGGCAGTCGTGATGCGGCCCTCGGTGTGAGCGGCAGGAAGGAATTTCTGAAT
CAGGCCACCGACTCGTCTCTCACTGGTGATATGAACGTTGTCGGGGATCTGTCGGGGCTGGATGTTGGCGATTATCACGC
CAGCGGACTCCAGATTTACACACTCGGCTGGGGAGTCGATCTGACCAGGGATCTGAGCCTGACAGCCACCGGGCGCTATT
TTCTGGCCAACTACGTACCCGACGGACTCAGTCGCCGGATCGGCCTGGAAACTGATTTCACCTTGACGTATGCAATTTCT
GACGCGCTGTCGATCATTGCAGGCTACGACAGGTTCTTCACCGGCAGATTTTTCAGCGACGCATCGGGGAGCAACGACGA
TATCCACTACGGCTATCTCATGTTCCAGTTCGATCTGTCACACACCAAACCGAAGAAGGCACTCGGCAAGTGA

Upstream 100 bases:

>100_bases
GCAACGATGAATTGCTGGCCACCTGCCGGTTGGAGCGTCCCCTGTCGATGCAGGGATGTCCGGTATGCGGCCGTTGATCT
GGTAACCACGGGAGGATTAC

Downstream 100 bases:

>100_bases
TGGGGCTGCCTTGCCGTCGGAACGCGGCGCTAACGGAGAGCGCGGGGAACGGCGTAATATTTCTTGAAGTTTACCCTGTA
TTGTACGTATGCTTGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MKRIVIGIAAAFALCSASWAMGADDARTEPGTCRQIAELTRKYDSGRALPGDMAVDGRPCLRSEAADCLFGVLEKVLAKC
RSEGKEALEPEERALILRLREELDAELESRHGYHTLRDEVEAMLAKPDLYDYEYRVGVNGFVRGEGAGSFRLPDFSQAPG
HAEGRFLYRVKPYLFWHPVAWLDLHAEGQGYGFSGGSQDYGKISLYQGFAEILCPLRDGNSLKAGRQELVYGSSFMLGSD
SFYKGLVYDAVRLRITPLAPLTVDIFGGWYASPWSDGTEGGLAGGYATWNISDGTGLEFYGFRDSGSAERHDGEHRNSFG
VRATAKFGPVSCEVEPVWQTGRLFNGVDANESIRAWGGHADIMIDTDLGGIGNHFFAGAAYGSGSRDAALGVSGRKEFLN
QATDSSLTGDMNVVGDLSGLDVGDYHASGLQIYTLGWGVDLTRDLSLTATGRYFLANYVPDGLSRRIGLETDFTLTYAIS
DALSIIAGYDRFFTGRFFSDASGSNDDIHYGYLMFQFDLSHTKPKKALGK

Sequences:

>Translated_530_residues
MKRIVIGIAAAFALCSASWAMGADDARTEPGTCRQIAELTRKYDSGRALPGDMAVDGRPCLRSEAADCLFGVLEKVLAKC
RSEGKEALEPEERALILRLREELDAELESRHGYHTLRDEVEAMLAKPDLYDYEYRVGVNGFVRGEGAGSFRLPDFSQAPG
HAEGRFLYRVKPYLFWHPVAWLDLHAEGQGYGFSGGSQDYGKISLYQGFAEILCPLRDGNSLKAGRQELVYGSSFMLGSD
SFYKGLVYDAVRLRITPLAPLTVDIFGGWYASPWSDGTEGGLAGGYATWNISDGTGLEFYGFRDSGSAERHDGEHRNSFG
VRATAKFGPVSCEVEPVWQTGRLFNGVDANESIRAWGGHADIMIDTDLGGIGNHFFAGAAYGSGSRDAALGVSGRKEFLN
QATDSSLTGDMNVVGDLSGLDVGDYHASGLQIYTLGWGVDLTRDLSLTATGRYFLANYVPDGLSRRIGLETDFTLTYAIS
DALSIIAGYDRFFTGRFFSDASGSNDDIHYGYLMFQFDLSHTKPKKALGK
>Mature_530_residues
MKRIVIGIAAAFALCSASWAMGADDARTEPGTCRQIAELTRKYDSGRALPGDMAVDGRPCLRSEAADCLFGVLEKVLAKC
RSEGKEALEPEERALILRLREELDAELESRHGYHTLRDEVEAMLAKPDLYDYEYRVGVNGFVRGEGAGSFRLPDFSQAPG
HAEGRFLYRVKPYLFWHPVAWLDLHAEGQGYGFSGGSQDYGKISLYQGFAEILCPLRDGNSLKAGRQELVYGSSFMLGSD
SFYKGLVYDAVRLRITPLAPLTVDIFGGWYASPWSDGTEGGLAGGYATWNISDGTGLEFYGFRDSGSAERHDGEHRNSFG
VRATAKFGPVSCEVEPVWQTGRLFNGVDANESIRAWGGHADIMIDTDLGGIGNHFFAGAAYGSGSRDAALGVSGRKEFLN
QATDSSLTGDMNVVGDLSGLDVGDYHASGLQIYTLGWGVDLTRDLSLTATGRYFLANYVPDGLSRRIGLETDFTLTYAIS
DALSIIAGYDRFFTGRFFSDASGSNDDIHYGYLMFQFDLSHTKPKKALGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57787; Mature: 57787

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIVIGIAAAFALCSASWAMGADDARTEPGTCRQIAELTRKYDSGRALPGDMAVDGRPC
CCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
LRSEAADCLFGVLEKVLAKCRSEGKEALEPEERALILRLREELDAELESRHGYHTLRDEV
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EAMLAKPDLYDYEYRVGVNGFVRGEGAGSFRLPDFSQAPGHAEGRFLYRVKPYLFWHPVA
HHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCEE
WLDLHAEGQGYGFSGGSQDYGKISLYQGFAEILCPLRDGNSLKAGRQELVYGSSFMLGSD
EEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHEEECCCCCCCCCCCHHEEECCEEEECCC
SFYKGLVYDAVRLRITPLAPLTVDIFGGWYASPWSDGTEGGLAGGYATWNISDGTGLEFY
HHHHHHHEEEEEEEEECCCCEEEEECCCEECCCCCCCCCCCCCCCEEEEEECCCCCEEEE
GFRDSGSAERHDGEHRNSFGVRATAKFGPVSCEVEPVWQTGRLFNGVDANESIRAWGGHA
EECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCEECCCCCCCCEEECCCCE
DIMIDTDLGGIGNHFFAGAAYGSGSRDAALGVSGRKEFLNQATDSSLTGDMNVVGDLSGL
EEEEECCCCCCCCHHEEECCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCEEEECCCCC
DVGDYHASGLQIYTLGWGVDLTRDLSLTATGRYFLANYVPDGLSRRIGLETDFTLTYAIS
CCCCCCCCCEEEEEEEECCCEECCEEEEECCCEEEEECCCCCHHHHCCCCCCCEEEEEHH
DALSIIAGYDRFFTGRFFSDASGSNDDIHYGYLMFQFDLSHTKPKKALGK
HHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEEEEEEECCCCCCHHHCCC
>Mature Secondary Structure
MKRIVIGIAAAFALCSASWAMGADDARTEPGTCRQIAELTRKYDSGRALPGDMAVDGRPC
CCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
LRSEAADCLFGVLEKVLAKCRSEGKEALEPEERALILRLREELDAELESRHGYHTLRDEV
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EAMLAKPDLYDYEYRVGVNGFVRGEGAGSFRLPDFSQAPGHAEGRFLYRVKPYLFWHPVA
HHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCEE
WLDLHAEGQGYGFSGGSQDYGKISLYQGFAEILCPLRDGNSLKAGRQELVYGSSFMLGSD
EEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHEEECCCCCCCCCCCHHEEECCEEEECCC
SFYKGLVYDAVRLRITPLAPLTVDIFGGWYASPWSDGTEGGLAGGYATWNISDGTGLEFY
HHHHHHHEEEEEEEEECCCCEEEEECCCEECCCCCCCCCCCCCCCEEEEEECCCCCEEEE
GFRDSGSAERHDGEHRNSFGVRATAKFGPVSCEVEPVWQTGRLFNGVDANESIRAWGGHA
EECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCEECCCCCCCCEEECCCCE
DIMIDTDLGGIGNHFFAGAAYGSGSRDAALGVSGRKEFLNQATDSSLTGDMNVVGDLSGL
EEEEECCCCCCCCHHEEECCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCEEEECCCCC
DVGDYHASGLQIYTLGWGVDLTRDLSLTATGRYFLANYVPDGLSRRIGLETDFTLTYAIS
CCCCCCCCCEEEEEEEECCCEECCEEEEECCCEEEEECCCCCHHHHCCCCCCCEEEEEHH
DALSIIAGYDRFFTGRFFSDASGSNDDIHYGYLMFQFDLSHTKPKKALGK
HHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEEEEEEECCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA