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The map label for this gene is 39996332

Identifier: 39996332

GI number: 39996332

Start: 1333874

End: 1334836

Strand: Direct

Name: 39996332

Synonym: GSU1230

Alternate gene names: NA

Gene position: 1333874-1334836 (Clockwise)

Preceding gene: 39996331

Following gene: 39996333

Centisome position: 34.97

GC content: 61.89

Gene sequence:

>963_bases
ATGGCGCTCAAAAAACTCTTCATAGCACTCACGTGCATGCTCTGCCTCTGCTGCGGCGCGTCGTCGGCGTCTGCGGCGGG
CAAGCTGGTGGCTGCCGTGCTCACCAGCGATATGGAGCGTTACCGTGATGCGTACCGTTCGTTCCTCAAGGCTCTGGCGG
CGAAAGGGTATGAGGAGGGGGCCGTGGAGGTGGTGACGCAGACGCCCAACCCTGACCCCATCTCCTGGGCGAACAGTGTG
CGGAAATTCGATGCCATCAAGCCCGACCTGCTCGTGACGTTCGGTGCTCCCGTCACCCTTGCCGCAAAGCAGGAAACCAG
CGGTATTCCCGTTGTGTTCGTGGACGTCTACGGGCCGGTCGAAACCGGCATCTCGCGCAGCATGTCCCAGGCGGGGGGAA
GCCTCTGCGGAGTCAGCTCCAAGGTCCCCGTAGCAACGCTCATCAAGGCCATGGGCGATATCCGGCCCATCAGGACTCTG
GGCGTCCTCTACAATACCCGGGAAGCCGGCTCAATCCTTCAGCTCAAGGAGGTCAAGCGCGTGGCGGCCCAGCAGGGGTT
CGCGGTTGTCGAGGCGAATGTATCGTCCGCTGCGGGGCTCGATACGGCGCTTACCTATCTGCTCGGCCGCGCTGACTGCC
TCTTCGTCTCCGAGAGTTCGGTGATCGGCAGAGGTTTCGACCGCATCGTCAGGAAGGCTACCGACGCACGTGTGGCGGTC
ATCTCACTTACGCCCGGCTCTTCCGAGCGGGGGGCGCTGGTTTCCCTCGAGATCAGCCCGACCGAGCAGGGGCAACTGGC
GGCGGATTACGCATCCAAGATCCTTTCCGGCCGAAAACCGGGAGAGTTACCCGTCTACACACCACGTAAGGTTGACCTGG
TGCTCAACATGGGAGTTGCCAGAACGCTGGATCTCCATGTACCATTCAAAGCATTGAGCGCCGCCACACGAGTGATCAAG
TAG

Upstream 100 bases:

>100_bases
GGATTACGACAATAAGCTGTCTTCCCTGTACGAAGGGAACGTGCATCAGGTAACCGCCCTTGTGAGGGCGAAGTGGTAGC
GGGATGACCGGAACCGAGTA

Downstream 100 bases:

>100_bases
GGAGCGGCCGCGGCACTCCCTTTGAGGTAGTTGATGGGAAATATCCTGATCGTTGATGATGACAGATCGTTTTCGCAGTT
TCTGAAAAAGTACATTCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; ABC Transporter Permease; ABC Transporter; ABC Transporter Periplasmic Protein; Permease; ABC-Type Transporter Periplasmic Component; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC Transporter Periplasmic Component; Permease Protein

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MALKKLFIALTCMLCLCCGASSASAAGKLVAAVLTSDMERYRDAYRSFLKALAAKGYEEGAVEVVTQTPNPDPISWANSV
RKFDAIKPDLLVTFGAPVTLAAKQETSGIPVVFVDVYGPVETGISRSMSQAGGSLCGVSSKVPVATLIKAMGDIRPIRTL
GVLYNTREAGSILQLKEVKRVAAQQGFAVVEANVSSAAGLDTALTYLLGRADCLFVSESSVIGRGFDRIVRKATDARVAV
ISLTPGSSERGALVSLEISPTEQGQLAADYASKILSGRKPGELPVYTPRKVDLVLNMGVARTLDLHVPFKALSAATRVIK

Sequences:

>Translated_320_residues
MALKKLFIALTCMLCLCCGASSASAAGKLVAAVLTSDMERYRDAYRSFLKALAAKGYEEGAVEVVTQTPNPDPISWANSV
RKFDAIKPDLLVTFGAPVTLAAKQETSGIPVVFVDVYGPVETGISRSMSQAGGSLCGVSSKVPVATLIKAMGDIRPIRTL
GVLYNTREAGSILQLKEVKRVAAQQGFAVVEANVSSAAGLDTALTYLLGRADCLFVSESSVIGRGFDRIVRKATDARVAV
ISLTPGSSERGALVSLEISPTEQGQLAADYASKILSGRKPGELPVYTPRKVDLVLNMGVARTLDLHVPFKALSAATRVIK
>Mature_319_residues
ALKKLFIALTCMLCLCCGASSASAAGKLVAAVLTSDMERYRDAYRSFLKALAAKGYEEGAVEVVTQTPNPDPISWANSVR
KFDAIKPDLLVTFGAPVTLAAKQETSGIPVVFVDVYGPVETGISRSMSQAGGSLCGVSSKVPVATLIKAMGDIRPIRTLG
VLYNTREAGSILQLKEVKRVAAQQGFAVVEANVSSAAGLDTALTYLLGRADCLFVSESSVIGRGFDRIVRKATDARVAVI
SLTPGSSERGALVSLEISPTEQGQLAADYASKILSGRKPGELPVYTPRKVDLVLNMGVARTLDLHVPFKALSAATRVIK

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33739; Mature: 33607

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKKLFIALTCMLCLCCGASSASAAGKLVAAVLTSDMERYRDAYRSFLKALAAKGYEEG
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AVEVVTQTPNPDPISWANSVRKFDAIKPDLLVTFGAPVTLAAKQETSGIPVVFVDVYGPV
CEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCEEEEEECCCH
ETGISRSMSQAGGSLCGVSSKVPVATLIKAMGDIRPIRTLGVLYNTREAGSILQLKEVKR
HHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHH
VAAQQGFAVVEANVSSAAGLDTALTYLLGRADCLFVSESSVIGRGFDRIVRKATDARVAV
HHHHCCCEEEEECCCHHCCHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHCCCCEEEE
ISLTPGSSERGALVSLEISPTEQGQLAADYASKILSGRKPGELPVYTPRKVDLVLNMGVA
EEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCE
RTLDLHVPFKALSAATRVIK
EEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
ALKKLFIALTCMLCLCCGASSASAAGKLVAAVLTSDMERYRDAYRSFLKALAAKGYEEG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AVEVVTQTPNPDPISWANSVRKFDAIKPDLLVTFGAPVTLAAKQETSGIPVVFVDVYGPV
CEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCEEEEEECCCH
ETGISRSMSQAGGSLCGVSSKVPVATLIKAMGDIRPIRTLGVLYNTREAGSILQLKEVKR
HHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHH
VAAQQGFAVVEANVSSAAGLDTALTYLLGRADCLFVSESSVIGRGFDRIVRKATDARVAV
HHHHCCCEEEEECCCHHCCHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHCCCCEEEE
ISLTPGSSERGALVSLEISPTEQGQLAADYASKILSGRKPGELPVYTPRKVDLVLNMGVA
EEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCE
RTLDLHVPFKALSAATRVIK
EEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA