| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is gltX
Identifier: 39996321
GI number: 39996321
Start: 1322000
End: 1323400
Strand: Direct
Name: gltX
Synonym: GSU1219
Alternate gene names: 39996321
Gene position: 1322000-1323400 (Clockwise)
Preceding gene: 39996320
Following gene: 39996324
Centisome position: 34.66
GC content: 61.74
Gene sequence:
>1401_bases ATGTCCGACGTACGTTTGCGCTTCGCGCCGAGCCCCACGGGCTATCTCCACGTGGGGGGAGCGCGTACCGCACTTTTCAA TTGGCTGCTGGCCCGCAAGCAGGGCGGTACATTCATCCTGCGCATCGAGGATACCGATGTTGCCCGTTCCACCCAGGAAT CGGTTGATGCCATCCTCCAGGGGATGGAATGGCTCGGCCTCGACTGGGATGAGGGGCCTTTCTATCAATCCGAGCGCTTT CCCGTCTACCGGGAGTTCGTGGAACGGCTCCTGGCCGAGGGAAAGGCGTACCGCTGCTACTGCACGCCCGAGGAGTTGGA GGCGCGGCGCGAACAGGCCATGAAGGAGGGGCGCAAGCCCAAGTATGACGGTACCTGCCGCGATCTTGTCACTCAGGACG CCGACAGGCCCTTTGTGGTCCGCTTCAGGGCCCCCCACGAAGGGGTGACAGCCTTCGACGATCTGATCAAAGGCCGGATC GCCTTTAACAACGAGGAGCTGGACGACCTGATCATACAGCGCACCGACGGAACCCCCACCTATAACTTCGTGGTGGTTAT CGACGATGCAACCATGGGGATCACCACCGTCATCCGCGGTGACGATCATATCAACAACACTCCCCGCCAGATTCTGCTCT ACGAGGCCCTGGGCTACCCGGTGCCCCGTTTTGCCCACGTGCCGATGATCCTCGGCGCCGACAAGACCCGGCTTTCCAAA CGGCATGGCGCCACGAGCGTCATGGCTTACCGCGACATGGGGTTTCTGCCCGAAGCGATGGTCAATTACCTGGTGCGGCT CGGCTGGAGCCACGGGGACGAAGAGATATTCAGCCGGCAGGACCTTGTCGAGAAGTTCACGATTGAAGCGGTGGGCAAGT CTGCAGGGGTGTTCAATCCGGACAAGCTCCTCTGGCTCAACCATCACTACATCAAAGAGAGCTCGCCCGAGCGACTCGCG GAGCTTCTGGTGCCGTTTCTCCGGGAGCGGGGTGTCGACCCCTCGACCGGACCGAGCCTCCCTCAAGTGGTCAAGACTCT TCAGGAGCGGTCGCGGACTCTCGTTGAGATGGCCGACGGTGCCCTGTTCTACTATCGGAGCGAAATCAGCTATGACGAGG AGGCAGCCGCCAAGCATCTGGTGCCGGGGACGCTTCCTCTGCTTGCCTCGCTCGCGGAGAAACTCGACGCGTGTGCCGAT TTCAGCCATTCGGGGCTCGAGGCCGCATTCAAGGAGTTCATTGCGGAAAAGGGGATCAAATTCGGGCAACTGGGACCGGC CGTGCGCGTTTCTCTGTGCGGCGGCACCGCTTCACCCGGTATCTACGAGGTTGTAGAGGCTCTCGGCAAGGACGAGACGC TGCGGCGGCTGCGCCGGGCCGTGGCATATCTGGAGCAGTAG
Upstream 100 bases:
>100_bases ACCGTTGATCTGGCCGCCTGGGCCGACGAGGAGTATCGCATCGCCGGTCCCGAAGCCCCTTCCGACAACGACGAAAACGA CCGAGAGTAAGGAGCACTTC
Downstream 100 bases:
>100_bases ACCGAACCATTTCGCGCACTGCAAAAGGGGCGGCACGATCGGATTCGTGCCGCCCCTTTTTTGTCGAAATGTTCTGCTGC CCCGGCGACCCGCCGGTGCA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSDVRLRFAPSPTGYLHVGGARTALFNWLLARKQGGTFILRIEDTDVARSTQESVDAILQGMEWLGLDWDEGPFYQSERF PVYREFVERLLAEGKAYRCYCTPEELEARREQAMKEGRKPKYDGTCRDLVTQDADRPFVVRFRAPHEGVTAFDDLIKGRI AFNNEELDDLIIQRTDGTPTYNFVVVIDDATMGITTVIRGDDHINNTPRQILLYEALGYPVPRFAHVPMILGADKTRLSK RHGATSVMAYRDMGFLPEAMVNYLVRLGWSHGDEEIFSRQDLVEKFTIEAVGKSAGVFNPDKLLWLNHHYIKESSPERLA ELLVPFLRERGVDPSTGPSLPQVVKTLQERSRTLVEMADGALFYYRSEISYDEEAAAKHLVPGTLPLLASLAEKLDACAD FSHSGLEAAFKEFIAEKGIKFGQLGPAVRVSLCGGTASPGIYEVVEALGKDETLRRLRRAVAYLEQ
Sequences:
>Translated_466_residues MSDVRLRFAPSPTGYLHVGGARTALFNWLLARKQGGTFILRIEDTDVARSTQESVDAILQGMEWLGLDWDEGPFYQSERF PVYREFVERLLAEGKAYRCYCTPEELEARREQAMKEGRKPKYDGTCRDLVTQDADRPFVVRFRAPHEGVTAFDDLIKGRI AFNNEELDDLIIQRTDGTPTYNFVVVIDDATMGITTVIRGDDHINNTPRQILLYEALGYPVPRFAHVPMILGADKTRLSK RHGATSVMAYRDMGFLPEAMVNYLVRLGWSHGDEEIFSRQDLVEKFTIEAVGKSAGVFNPDKLLWLNHHYIKESSPERLA ELLVPFLRERGVDPSTGPSLPQVVKTLQERSRTLVEMADGALFYYRSEISYDEEAAAKHLVPGTLPLLASLAEKLDACAD FSHSGLEAAFKEFIAEKGIKFGQLGPAVRVSLCGGTASPGIYEVVEALGKDETLRRLRRAVAYLEQ >Mature_465_residues SDVRLRFAPSPTGYLHVGGARTALFNWLLARKQGGTFILRIEDTDVARSTQESVDAILQGMEWLGLDWDEGPFYQSERFP VYREFVERLLAEGKAYRCYCTPEELEARREQAMKEGRKPKYDGTCRDLVTQDADRPFVVRFRAPHEGVTAFDDLIKGRIA FNNEELDDLIIQRTDGTPTYNFVVVIDDATMGITTVIRGDDHINNTPRQILLYEALGYPVPRFAHVPMILGADKTRLSKR HGATSVMAYRDMGFLPEAMVNYLVRLGWSHGDEEIFSRQDLVEKFTIEAVGKSAGVFNPDKLLWLNHHYIKESSPERLAE LLVPFLRERGVDPSTGPSLPQVVKTLQERSRTLVEMADGALFYYRSEISYDEEAAAKHLVPGTLPLLASLAEKLDACADF SHSGLEAAFKEFIAEKGIKFGQLGPAVRVSLCGGTASPGIYEVVEALGKDETLRRLRRAVAYLEQ
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=493, Percent_Identity=30.4259634888438, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI62241042, Length=393, Percent_Identity=25.1908396946565, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1788743, Length=464, Percent_Identity=52.5862068965517, Blast_Score=514, Evalue=1e-147, Organism=Escherichia coli, GI226510925, Length=251, Percent_Identity=38.2470119521912, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1786895, Length=347, Percent_Identity=22.7665706051873, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71993394, Length=477, Percent_Identity=31.8658280922432, Blast_Score=238, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6324540, Length=492, Percent_Identity=33.739837398374, Blast_Score=271, Evalue=2e-73, Organism=Saccharomyces cerevisiae, GI6321192, Length=258, Percent_Identity=28.6821705426357, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324742, Length=123, Percent_Identity=37.3983739837398, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24665321, Length=488, Percent_Identity=35.655737704918, Blast_Score=287, Evalue=8e-78, Organism=Drosophila melanogaster, GI24649466, Length=119, Percent_Identity=35.2941176470588, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_GEOSL (Q74DU6)
Other databases:
- EMBL: AE017180 - RefSeq: NP_952272.1 - ProteinModelPortal: Q74DU6 - SMR: Q74DU6 - GeneID: 2688264 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU1219 - NMPDR: fig|243231.1.peg.1210 - TIGR: GSU1219 - HOGENOM: HBG628189 - OMA: MAHIPLI - ProtClustDB: PRK01406 - BioCyc: GSUL243231:GSU_1219-MONOMER - BRENDA: 6.1.1.17 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 52402; Mature: 52271
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 240-240
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVRLRFAPSPTGYLHVGGARTALFNWLLARKQGGTFILRIEDTDVARSTQESVDAILQ CCCCEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHH GMEWLGLDWDEGPFYQSERFPVYREFVERLLAEGKAYRCYCTPEELEARREQAMKEGRKP CHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCC KYDGTCRDLVTQDADRPFVVRFRAPHEGVTAFDDLIKGRIAFNNEELDDLIIQRTDGTPT CCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCEEECCCCHHHHHEECCCCCCC YNFVVVIDDATMGITTVIRGDDHINNTPRQILLYEALGYPVPRFAHVPMILGADKTRLSK EEEEEEECCCCCCEEEEEECCCCCCCCHHHEEEEHHHCCCCCCHHCCCEEECCCHHHHHH RHGATSVMAYRDMGFLPEAMVNYLVRLGWSHGDEEIFSRQDLVEKFTIEAVGKSAGVFNP HCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC DKLLWLNHHYIKESSPERLAELLVPFLRERGVDPSTGPSLPQVVKTLQERSRTLVEMADG CCEEEEECHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC ALFYYRSEISYDEEAAAKHLVPGTLPLLASLAEKLDACADFSHSGLEAAFKEFIAEKGIK EEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC FGQLGPAVRVSLCGGTASPGIYEVVEALGKDETLRRLRRAVAYLEQ CCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SDVRLRFAPSPTGYLHVGGARTALFNWLLARKQGGTFILRIEDTDVARSTQESVDAILQ CCCEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHH GMEWLGLDWDEGPFYQSERFPVYREFVERLLAEGKAYRCYCTPEELEARREQAMKEGRKP CHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCC KYDGTCRDLVTQDADRPFVVRFRAPHEGVTAFDDLIKGRIAFNNEELDDLIIQRTDGTPT CCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCEEECCCCHHHHHEECCCCCCC YNFVVVIDDATMGITTVIRGDDHINNTPRQILLYEALGYPVPRFAHVPMILGADKTRLSK EEEEEEECCCCCCEEEEEECCCCCCCCHHHEEEEHHHCCCCCCHHCCCEEECCCHHHHHH RHGATSVMAYRDMGFLPEAMVNYLVRLGWSHGDEEIFSRQDLVEKFTIEAVGKSAGVFNP HCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC DKLLWLNHHYIKESSPERLAELLVPFLRERGVDPSTGPSLPQVVKTLQERSRTLVEMADG CCEEEEECHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC ALFYYRSEISYDEEAAAKHLVPGTLPLLASLAEKLDACADFSHSGLEAAFKEFIAEKGIK EEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC FGQLGPAVRVSLCGGTASPGIYEVVEALGKDETLRRLRRAVAYLEQ CCCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA