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The map label for this gene is yadS [C]

Identifier: 39996310

GI number: 39996310

Start: 1311551

End: 1312195

Strand: Direct

Name: yadS [C]

Synonym: GSU1208

Alternate gene names: 39996310

Gene position: 1311551-1312195 (Clockwise)

Preceding gene: 39996309

Following gene: 39996312

Centisome position: 34.39

GC content: 66.82

Gene sequence:

>645_bases
ATGATTACTGCGCTGGACGTCTTCGGGACGTTCGTTTTCGCCCTGTCAGGGGCATTCAGGGCGATCAAATACGAGTTGGA
CCTTCTTGGAGTTCTTGTGCTGGCGGTTGCCACCGGGGTGGGGGGCGGCATGATCCGCGATCTGCTCCTGGGGACCACGC
CGCCCATGGTCTTTCGCAATGAATCCTATCTGGCCATCTGCGTGGCCGGCGGGCTTCTGGTCTTCCTGGCCGCTGGTCGG
CTTGCCCCGATCTGGGACTGGGTCATGGTGGCCGATGCCGTTGGCCTGGGCGTCTTTGCCGCCATCGGTGCCCAGAAGGG
GGCCGCGGGTGGGCTCGGTGGCTTCGGCATCGTCATGATGGCGGCCATGACCGCCACCGGCGGCGGCGTGGTGCGGGACA
TCCTGGTGATGGAGATTCCCGCCGTGCTCCGCACCGACTTCTATGCCAGCGCCGCCATCCTCGGTGGCGCATGCTTCGTG
GCGGCCCGGGCCGCCGGCGCGCCAGAGCAGGTCCAGCTCTTCACCTGTCTGGCGGTCACCCTGGTTCTGCGTCTGCTCGC
CATGCGCTTCGGTCTTTCCCTCCCGCGGATAAAGGGGCTCGCCCCTGCGCCGGGGGACGGCGGCACAGGGGACGGCAAAG
AGTAA

Upstream 100 bases:

>100_bases
GGACGACCAGATACTTGACTACATTACCAATGAGCAGGGAGAGGGACTCGTTTTCAGACGGGAATCGGGCGATGTCTGCT
GCTGAGGGTGGAACCGGATC

Downstream 100 bases:

>100_bases
AACGGGGCATCCGCCCCCCCTACTTGGAGCCGAACACGGTCTTCAGCAGTTCCGTGGTGCGGGCCGCGGGGTTGGTCCGG
ATTTTTTTCTCCTCTTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MITALDVFGTFVFALSGAFRAIKYELDLLGVLVLAVATGVGGGMIRDLLLGTTPPMVFRNESYLAICVAGGLLVFLAAGR
LAPIWDWVMVADAVGLGVFAAIGAQKGAAGGLGGFGIVMMAAMTATGGGVVRDILVMEIPAVLRTDFYASAAILGGACFV
AARAAGAPEQVQLFTCLAVTLVLRLLAMRFGLSLPRIKGLAPAPGDGGTGDGKE

Sequences:

>Translated_214_residues
MITALDVFGTFVFALSGAFRAIKYELDLLGVLVLAVATGVGGGMIRDLLLGTTPPMVFRNESYLAICVAGGLLVFLAAGR
LAPIWDWVMVADAVGLGVFAAIGAQKGAAGGLGGFGIVMMAAMTATGGGVVRDILVMEIPAVLRTDFYASAAILGGACFV
AARAAGAPEQVQLFTCLAVTLVLRLLAMRFGLSLPRIKGLAPAPGDGGTGDGKE
>Mature_214_residues
MITALDVFGTFVFALSGAFRAIKYELDLLGVLVLAVATGVGGGMIRDLLLGTTPPMVFRNESYLAICVAGGLLVFLAAGR
LAPIWDWVMVADAVGLGVFAAIGAQKGAAGGLGGFGIVMMAAMTATGGGVVRDILVMEIPAVLRTDFYASAAILGGACFV
AARAAGAPEQVQLFTCLAVTLVLRLLAMRFGLSLPRIKGLAPAPGDGGTGDGKE

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=198, Percent_Identity=39.8989898989899, Blast_Score=107, Evalue=5e-25,
Organism=Escherichia coli, GI87082304, Length=164, Percent_Identity=31.7073170731707, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21706; Mature: 21706

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITALDVFGTFVFALSGAFRAIKYELDLLGVLVLAVATGVGGGMIRDLLLGTTPPMVFRN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEC
ESYLAICVAGGLLVFLAAGRLAPIWDWVMVADAVGLGVFAAIGAQKGAAGGLGGFGIVMM
CCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
AAMTATGGGVVRDILVMEIPAVLRTDFYASAAILGGACFVAARAAGAPEQVQLFTCLAVT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LVLRLLAMRFGLSLPRIKGLAPAPGDGGTGDGKE
HHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MITALDVFGTFVFALSGAFRAIKYELDLLGVLVLAVATGVGGGMIRDLLLGTTPPMVFRN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEC
ESYLAICVAGGLLVFLAAGRLAPIWDWVMVADAVGLGVFAAIGAQKGAAGGLGGFGIVMM
CCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
AAMTATGGGVVRDILVMEIPAVLRTDFYASAAILGGACFVAARAAGAPEQVQLFTCLAVT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LVLRLLAMRFGLSLPRIKGLAPAPGDGGTGDGKE
HHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301; 1741267 [H]