| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996309
Identifier: 39996309
GI number: 39996309
Start: 1311248
End: 1311535
Strand: Direct
Name: 39996309
Synonym: GSU1207
Alternate gene names: NA
Gene position: 1311248-1311535 (Clockwise)
Preceding gene: 39996308
Following gene: 39996310
Centisome position: 34.38
GC content: 56.94
Gene sequence:
>288_bases ATGACGATCACTGATGCGGCAAAAGCGGTTCTCGCGCCGATTGTGGGGGAGCACCCCGGAAAGATTCTGCGTGTTGTCTT TGAGGGGTTTGGTTGAGGCGGTCCCCGCTTGGGACTGGTTCTGGATGAACCGGCTGATAACGACGCGCGGATGGTTCTGA ATGGCATCGAGGTGGCGGTGACCAGCAATTTCCGCTCCCTCCTGGACGACCAGATACTTGACTACATTACCAATGAGCAG GGAGAGGGACTCGTTTTCAGACGGGAATCGGGCGATGTCTGCTGCTGA
Upstream 100 bases:
>100_bases GTCTGCCGCGCCGACGCGGACGGCTCCCATGGGGGTAGCGACAAGGGCGATAAGATCGAGCAGATAGCGGATCTGCTCAA CGACGAAAGGAGAGCATGAC
Downstream 100 bases:
>100_bases GGGTGGAACCGGATCATGATTACTGCGCTGGACGTCTTCGGGACGTTCGTTTTCGCCCTGTCAGGGGCATTCAGGGCGAT CAAATACGAGTTGGACCTTC
Product: HesB/YadR/YfhF family protein, selenocysteine-containing
Products: NA
Alternate protein names: HesB/YadR/YfhF Family Protein Selenocysteine-Containing; Hesb/Yadr/Yfhf-Family Protein
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MTITDAAKAVLAPIVGEHPGKILRVVFEGFGUGGPRLGLVLDEPADNDARMVLNGIEVAVTSNFRSLLDDQILDYITNEQ GEGLVFRRESGDVCC
Sequences:
>Translated_95_residues MTITDAAKAVLAPIVGEHPGKILRVVFEGFG*GGPRLGLVLDEPADNDARMVLNGIEVAVTSNFRSLLDDQILDYITNEQ GEGLVFRRESGDVCC >Mature_94_residues TITDAAKAVLAPIVGEHPGKILRVVFEGFG*GGPRLGLVLDEPADNDARMVLNGIEVAVTSNFRSLLDDQILDYITNEQG EGLVFRRESGDVCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10070; Mature: 9938
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITDAAKAVLAPIVGEHPGKILRVVFEGFGGGPRLGLVLDEPADNDARMVLNGIEVAVT CCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECEEEEEE SNFRSLLDDQILDYITNEQGEGLVFRRESGDVCC HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC >Mature Secondary Structure TITDAAKAVLAPIVGEHPGKILRVVFEGFGGGPRLGLVLDEPADNDARMVLNGIEVAVT CCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECEEEEEE SNFRSLLDDQILDYITNEQGEGLVFRRESGDVCC HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA