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The map label for this gene is ybaL [H]

Identifier: 39996306

GI number: 39996306

Start: 1308090

End: 1310183

Strand: Direct

Name: ybaL [H]

Synonym: GSU1204

Alternate gene names: 39996306

Gene position: 1308090-1310183 (Clockwise)

Preceding gene: 39996305

Following gene: 39996307

Centisome position: 34.3

GC content: 62.18

Gene sequence:

>2094_bases
GTGCAAAATGGCACGCTTCAATGTTCAACAGAGGCTTTTGTGGAATTTCAGATACTGCGTGACATGGAAATACTTTTCGG
GCTGGCGGTCTTTACGGTGGTGCTCCTGCGCCGGCTCATGTTCCCCTCGATTATCGGTTTTCTCGCCACCGGCATCCTGG
CCGGCCCCTCTGCTCTGGGGCTCATCAAGAATACCCACCAGGTGGAGCAGATGGCCGAAATCGGGGTGGTGCTCCTGCTT
TTTACCATCGGCATCGAATTCTCGCTCAAGGAGCTGATGCGGATCAAGCACCTCGTCTTCTGGGGCGGGGGGATGCAGGT
AGGGGTAACCATCGCCATCGTGGCGGCCTTGGCGTTCGCCTTCGGCATACCGCCCTCCCAGGCCACCTTCTTCGGCTTCC
TGGTGGCCCTCTCCAGTACCGCCATCCTCATGAAGCTGCTCATGGACAAGGGGGAGATGGACGCCCCCCACGGTAAGGTG
GCGCTCGGCATCCTGATTTTTCAGGACCTCTGCGTGGTCCCCCTCATGCTCTTCACCCCGTTTCTTGCCGGGGCGGGCAA
CGGTTGGACGGGGATACTCCTGGTATCTCTCAAGGCGGTGGCCGTGGTAGTGGTGGCCCATTTCGGCTCCCGGTTCCTGG
TCCCCTGGATTTTCGAACAGGTAGTCAAGAGCCGCAGCCGCGAACTCTTTATCCTCACCATTATCTTTATCGGCTTCGGT
ACGGCCTGGCTCACGGCCCAGGTAGGACTGTCGCTGGCCCTGGGGGCATTCATCGCCGGCCTAGCCATCTCCGAATCGGA
GTACAGTCACCAGGCCCTGGGTGATATCATCCCGTTCCGCGATGCCTTCATGAGCCTGTTCTTCATCTCCGTGGGCATGC
TGCTCGATCTGTCCGTCCTGGTTCGGCAGCCGGTCCTGGTGGCCTCCCTCGTTCTGACTATCCTGGTGGTGAAGTTTCTG
GTCACGGGCGGAGCGGCCATGGCCCTCGGCATCCCGGCCCGGGTCGGCATCGTCACCGCGCTGGCCCTGGCCCAGATCGG
CGAATTCTCCTTCATTCTTTCCCAGACCGGCATGCAGTACGGTCTCCTCTCCAAGGATATGTACCAGGTATTTCTGGCTG
CATCGGTAGCCACCATGGCTCTCACTCCGCTTTGCCTCAAGGTGGGTGCGCCGGTGGCGAGTTATCTGGTGGGGGTTTTG
CCGACACCCTTGACCCGGGGCCGGGGCGTGCTTCGGGGGAAAGAGAAGAAGCTTTCCCTGACGGATCATGTAATCGTGGT
CGGCTACGGCGTCAACGGCAGGAATCTTTCCCGGGTGCTGAAGGTCCAGAAAATCCCCCATGTGGTGATCGAAACCAATC
CCTTCACGGTCTCCACGGAGAAGAGCAAGGGAACCCGCATCATGTTCGGCGACGCCACCCGGCCCGAGGTTCTCACCCAC
TCAGCCGTGGAGCGCGCGCGCAGCATCGTCATCGCCATTTCCGATGCGGCCGCCAGCCGCCGGGTCGTGGCCCTGGCGCG
GCAGATGAGCCCCACCATCCACATCATCGTCCGGACCCGCTACATTGCCGAGATGGAGCCCCTGTACAAGCTGGGCGCCA
ACGAGGTTGTGCCTGAGGAGTTCGAGACGTCCATCGAGATATTCTCCCGGGTTCTGCGCAACTTCCTCATCCCCCAGGAC
CAGATCGATCAGTGCGTGGGAGAAATTCGGCGGGGTTCCTACGACATGTTCCGCACCATGAGTCGCCGTCACAGCCACGC
CGTAGGGATCGCCGGGTACCTATCCGGCGCGGAGATCGCTACCTTCCGCGTGAAGAAGGGAGCCCCCATCGAGGGTGAAA
GCCTGCGGCAAGGGACCCTGCGAACCAGGTCGGGCGCCACGCTCCTGGTGATCAAGCGGGGGGACGAGGTGACGCCCAAT
CCCGACCCGGTCTGGGTCCTGCAGGAGGGGGACATCGTATTGCTGCTTGGCACGCCGGAGCAACTCGCCGCAGCCTCGCG
GCTTTTCGAGGCACCGGCGGTGGAGGGCGGGCCCGTTGCGCCGCCCCCGGCGGATAGCAGCCGACACGACACCAGCAACA
GGAGAGACCAGTGA

Upstream 100 bases:

>100_bases
GGCGCTTGATTCGTTGCCATTCCGCGATTCGTTGAGAGCGAAAGAAACCGAAACGGCGCCCTGACCGCCGGGCTCCATCA
TCCAGACGGCCTAGCTTCCT

Downstream 100 bases:

>100_bases
AAAAAGTACTCGTGACCTATTACTCGCGTAGCGGCAATACCGAAAAAATGGCCCGTATGATCGCCGACAGCCTCGTGACC
AGAGATCTGGCCGTTGAGTT

Product: sodium/hydrogen exchanger family/TrkA domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MQNGTLQCSTEAFVEFQILRDMEILFGLAVFTVVLLRRLMFPSIIGFLATGILAGPSALGLIKNTHQVEQMAEIGVVLLL
FTIGIEFSLKELMRIKHLVFWGGGMQVGVTIAIVAALAFAFGIPPSQATFFGFLVALSSTAILMKLLMDKGEMDAPHGKV
ALGILIFQDLCVVPLMLFTPFLAGAGNGWTGILLVSLKAVAVVVVAHFGSRFLVPWIFEQVVKSRSRELFILTIIFIGFG
TAWLTAQVGLSLALGAFIAGLAISESEYSHQALGDIIPFRDAFMSLFFISVGMLLDLSVLVRQPVLVASLVLTILVVKFL
VTGGAAMALGIPARVGIVTALALAQIGEFSFILSQTGMQYGLLSKDMYQVFLAASVATMALTPLCLKVGAPVASYLVGVL
PTPLTRGRGVLRGKEKKLSLTDHVIVVGYGVNGRNLSRVLKVQKIPHVVIETNPFTVSTEKSKGTRIMFGDATRPEVLTH
SAVERARSIVIAISDAAASRRVVALARQMSPTIHIIVRTRYIAEMEPLYKLGANEVVPEEFETSIEIFSRVLRNFLIPQD
QIDQCVGEIRRGSYDMFRTMSRRHSHAVGIAGYLSGAEIATFRVKKGAPIEGESLRQGTLRTRSGATLLVIKRGDEVTPN
PDPVWVLQEGDIVLLLGTPEQLAAASRLFEAPAVEGGPVAPPPADSSRHDTSNRRDQ

Sequences:

>Translated_697_residues
MQNGTLQCSTEAFVEFQILRDMEILFGLAVFTVVLLRRLMFPSIIGFLATGILAGPSALGLIKNTHQVEQMAEIGVVLLL
FTIGIEFSLKELMRIKHLVFWGGGMQVGVTIAIVAALAFAFGIPPSQATFFGFLVALSSTAILMKLLMDKGEMDAPHGKV
ALGILIFQDLCVVPLMLFTPFLAGAGNGWTGILLVSLKAVAVVVVAHFGSRFLVPWIFEQVVKSRSRELFILTIIFIGFG
TAWLTAQVGLSLALGAFIAGLAISESEYSHQALGDIIPFRDAFMSLFFISVGMLLDLSVLVRQPVLVASLVLTILVVKFL
VTGGAAMALGIPARVGIVTALALAQIGEFSFILSQTGMQYGLLSKDMYQVFLAASVATMALTPLCLKVGAPVASYLVGVL
PTPLTRGRGVLRGKEKKLSLTDHVIVVGYGVNGRNLSRVLKVQKIPHVVIETNPFTVSTEKSKGTRIMFGDATRPEVLTH
SAVERARSIVIAISDAAASRRVVALARQMSPTIHIIVRTRYIAEMEPLYKLGANEVVPEEFETSIEIFSRVLRNFLIPQD
QIDQCVGEIRRGSYDMFRTMSRRHSHAVGIAGYLSGAEIATFRVKKGAPIEGESLRQGTLRTRSGATLLVIKRGDEVTPN
PDPVWVLQEGDIVLLLGTPEQLAAASRLFEAPAVEGGPVAPPPADSSRHDTSNRRDQ
>Mature_697_residues
MQNGTLQCSTEAFVEFQILRDMEILFGLAVFTVVLLRRLMFPSIIGFLATGILAGPSALGLIKNTHQVEQMAEIGVVLLL
FTIGIEFSLKELMRIKHLVFWGGGMQVGVTIAIVAALAFAFGIPPSQATFFGFLVALSSTAILMKLLMDKGEMDAPHGKV
ALGILIFQDLCVVPLMLFTPFLAGAGNGWTGILLVSLKAVAVVVVAHFGSRFLVPWIFEQVVKSRSRELFILTIIFIGFG
TAWLTAQVGLSLALGAFIAGLAISESEYSHQALGDIIPFRDAFMSLFFISVGMLLDLSVLVRQPVLVASLVLTILVVKFL
VTGGAAMALGIPARVGIVTALALAQIGEFSFILSQTGMQYGLLSKDMYQVFLAASVATMALTPLCLKVGAPVASYLVGVL
PTPLTRGRGVLRGKEKKLSLTDHVIVVGYGVNGRNLSRVLKVQKIPHVVIETNPFTVSTEKSKGTRIMFGDATRPEVLTH
SAVERARSIVIAISDAAASRRVVALARQMSPTIHIIVRTRYIAEMEPLYKLGANEVVPEEFETSIEIFSRVLRNFLIPQD
QIDQCVGEIRRGSYDMFRTMSRRHSHAVGIAGYLSGAEIATFRVKKGAPIEGESLRQGTLRTRSGATLLVIKRGDEVTPN
PDPVWVLQEGDIVLLLGTPEQLAAASRLFEAPAVEGGPVAPPPADSSRHDTSNRRDQ

Specific function: Unknown

COG id: COG0475

COG function: function code P; Kef-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI157388921, Length=354, Percent_Identity=28.2485875706215, Blast_Score=115, Evalue=1e-25,
Organism=Escherichia coli, GI1786685, Length=528, Percent_Identity=33.3333333333333, Blast_Score=258, Evalue=7e-70,
Organism=Escherichia coli, GI1789749, Length=566, Percent_Identity=30.9187279151943, Blast_Score=232, Evalue=5e-62,
Organism=Escherichia coli, GI1786232, Length=560, Percent_Identity=28.0357142857143, Blast_Score=218, Evalue=7e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR004771
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 75303; Mature: 75303

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNGTLQCSTEAFVEFQILRDMEILFGLAVFTVVLLRRLMFPSIIGFLATGILAGPSALG
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LIKNTHQVEQMAEIGVVLLLFTIGIEFSLKELMRIKHLVFWGGGMQVGVTIAIVAALAFA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
FGIPPSQATFFGFLVALSSTAILMKLLMDKGEMDAPHGKVALGILIFQDLCVVPLMLFTP
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FLAGAGNGWTGILLVSLKAVAVVVVAHFGSRFLVPWIFEQVVKSRSRELFILTIIFIGFG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHH
TAWLTAQVGLSLALGAFIAGLAISESEYSHQALGDIIPFRDAFMSLFFISVGMLLDLSVL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQPVLVASLVLTILVVKFLVTGGAAMALGIPARVGIVTALALAQIGEFSFILSQTGMQY
HHCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCHH
GLLSKDMYQVFLAASVATMALTPLCLKVGAPVASYLVGVLPTPLTRGRGVLRGKEKKLSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
TDHVIVVGYGVNGRNLSRVLKVQKIPHVVIETNPFTVSTEKSKGTRIMFGDATRPEVLTH
ECEEEEEEECCCCHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCEEEECCCCCCHHHHH
SAVERARSIVIAISDAAASRRVVALARQMSPTIHIIVRTRYIAEMEPLYKLGANEVVPEE
HHHHHHHEEEEEEECCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCHH
FETSIEIFSRVLRNFLIPQDQIDQCVGEIRRGSYDMFRTMSRRHSHAVGIAGYLSGAEIA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEHHHHCCCCEEE
TFRVKKGAPIEGESLRQGTLRTRSGATLLVIKRGDEVTPNPDPVWVLQEGDIVLLLGTPE
EEEECCCCCCCCCCHHCCCCEECCCCEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCH
QLAAASRLFEAPAVEGGPVAPPPADSSRHDTSNRRDQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQNGTLQCSTEAFVEFQILRDMEILFGLAVFTVVLLRRLMFPSIIGFLATGILAGPSALG
CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LIKNTHQVEQMAEIGVVLLLFTIGIEFSLKELMRIKHLVFWGGGMQVGVTIAIVAALAFA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
FGIPPSQATFFGFLVALSSTAILMKLLMDKGEMDAPHGKVALGILIFQDLCVVPLMLFTP
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FLAGAGNGWTGILLVSLKAVAVVVVAHFGSRFLVPWIFEQVVKSRSRELFILTIIFIGFG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHH
TAWLTAQVGLSLALGAFIAGLAISESEYSHQALGDIIPFRDAFMSLFFISVGMLLDLSVL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQPVLVASLVLTILVVKFLVTGGAAMALGIPARVGIVTALALAQIGEFSFILSQTGMQY
HHCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCHH
GLLSKDMYQVFLAASVATMALTPLCLKVGAPVASYLVGVLPTPLTRGRGVLRGKEKKLSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
TDHVIVVGYGVNGRNLSRVLKVQKIPHVVIETNPFTVSTEKSKGTRIMFGDATRPEVLTH
ECEEEEEEECCCCHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCEEEECCCCCCHHHHH
SAVERARSIVIAISDAAASRRVVALARQMSPTIHIIVRTRYIAEMEPLYKLGANEVVPEE
HHHHHHHEEEEEEECCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCHH
FETSIEIFSRVLRNFLIPQDQIDQCVGEIRRGSYDMFRTMSRRHSHAVGIAGYLSGAEIA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEHHHHCCCCEEE
TFRVKKGAPIEGESLRQGTLRTRSGATLLVIKRGDEVTPNPDPVWVLQEGDIVLLLGTPE
EEEECCCCCCCCCCHHCCCCEECCCCEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCH
QLAAASRLFEAPAVEGGPVAPPPADSSRHDTSNRRDQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 7721718 [H]