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The map label for this gene is 39996270

Identifier: 39996270

GI number: 39996270

Start: 1273277

End: 1273930

Strand: Direct

Name: 39996270

Synonym: GSU1168

Alternate gene names: NA

Gene position: 1273277-1273930 (Clockwise)

Preceding gene: 39996269

Following gene: 308513297

Centisome position: 33.38

GC content: 64.37

Gene sequence:

>654_bases
ATGTGTTCACGTGATGAATACCCCTGGGATTTCACCATGACTCGATTCATCGCCTTTTGCGCGGCACTCGCCCTGGCGCT
TGTTCTCACGCCATCTCCAGTCACGGCGGAACGTGCCCGGGACGTTCTGGCACAGATGAATGCCGCCCGCACCGATCCTC
AGGGATACGCGGAGCACCTGCGGGAGTTCCGCTCGCGCTTCAGGGGGAGGAACTACACCGTTCCCTGCTCCCGGACCCGG
ATCGTCACCCACGAGGGGACTGCGGCGGTGGACGAGGCGATACGCTTTCTCCTTCGCCAGAGGCCCATTTCCCCCCTGGC
CTGGTCCGATGGACTCGCCCGGGCCGCGGCGGCACATGTGGGCGTCCAGGGCAGGAATGGGGAAACGGGCCACGGGGAGG
GGCAGGGCGGGATGCGCGCCCGGATCGAGCGTCAAGGTACGTGGAAGAAGACCATTGGCGAGAATATCGGCTACGGCCCC
GACAACGCCCGCGCCGTCGTGATCCAGCTCATCGTCGACGACGGTGTGCCGGGTCGGGGACATCGGAAGAACATCTTTGA
TCCGGCCTTCGCAGTAGCGGGAGTCGCCTGCGGACCACACCCTGTCTTCGGTACGGTCTGTGTCATCGACTTTGCGGGGG
GATTTTCGGATTGA

Upstream 100 bases:

>100_bases
GCAAGGCTGAGATGGACCGTAAGAAATGTAGTGTCCTCGATCGGGCAAAAAAGAGAATCAAAAAGAATAGGGCCATTCAC
GGCCCTATTCTTTTTTGTGA

Downstream 100 bases:

>100_bases
CCTCTACAGAGGGGGATTATTTCTCCGCCAGCACGATATCCCCGTACCAGGCAGCCGCCTCCCCGCCGGTGTTGTCGGAA
TCGGTCATGAGCGCCACACC

Product: hypothetical protein

Products: NA

Alternate protein names: Allergen V5/Tpx-1 Family Protein; SCP-Like Extracellular Protein; Allergen V5/Tpx-1 Related Protein; Allergen V5/Tpx-1 ; Lipoprotein

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MCSRDEYPWDFTMTRFIAFCAALALALVLTPSPVTAERARDVLAQMNAARTDPQGYAEHLREFRSRFRGRNYTVPCSRTR
IVTHEGTAAVDEAIRFLLRQRPISPLAWSDGLARAAAAHVGVQGRNGETGHGEGQGGMRARIERQGTWKKTIGENIGYGP
DNARAVVIQLIVDDGVPGRGHRKNIFDPAFAVAGVACGPHPVFGTVCVIDFAGGFSD

Sequences:

>Translated_217_residues
MCSRDEYPWDFTMTRFIAFCAALALALVLTPSPVTAERARDVLAQMNAARTDPQGYAEHLREFRSRFRGRNYTVPCSRTR
IVTHEGTAAVDEAIRFLLRQRPISPLAWSDGLARAAAAHVGVQGRNGETGHGEGQGGMRARIERQGTWKKTIGENIGYGP
DNARAVVIQLIVDDGVPGRGHRKNIFDPAFAVAGVACGPHPVFGTVCVIDFAGGFSD
>Mature_217_residues
MCSRDEYPWDFTMTRFIAFCAALALALVLTPSPVTAERARDVLAQMNAARTDPQGYAEHLREFRSRFRGRNYTVPCSRTR
IVTHEGTAAVDEAIRFLLRQRPISPLAWSDGLARAAAAHVGVQGRNGETGHGEGQGGMRARIERQGTWKKTIGENIGYGP
DNARAVVIQLIVDDGVPGRGHRKNIFDPAFAVAGVACGPHPVFGTVCVIDFAGGFSD

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23566; Mature: 23566

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSRDEYPWDFTMTRFIAFCAALALALVLTPSPVTAERARDVLAQMNAARTDPQGYAEHL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
REFRSRFRGRNYTVPCSRTRIVTHEGTAAVDEAIRFLLRQRPISPLAWSDGLARAAAAHV
HHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GVQGRNGETGHGEGQGGMRARIERQGTWKKTIGENIGYGPDNARAVVIQLIVDDGVPGRG
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCC
HRKNIFDPAFAVAGVACGPHPVFGTVCVIDFAGGFSD
CCCCCCCHHHHHHHCCCCCCCHHHHEEEEEECCCCCC
>Mature Secondary Structure
MCSRDEYPWDFTMTRFIAFCAALALALVLTPSPVTAERARDVLAQMNAARTDPQGYAEHL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
REFRSRFRGRNYTVPCSRTRIVTHEGTAAVDEAIRFLLRQRPISPLAWSDGLARAAAAHV
HHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
GVQGRNGETGHGEGQGGMRARIERQGTWKKTIGENIGYGPDNARAVVIQLIVDDGVPGRG
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCC
HRKNIFDPAFAVAGVACGPHPVFGTVCVIDFAGGFSD
CCCCCCCHHHHHHHCCCCCCCHHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA