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The map label for this gene is 39996211

Identifier: 39996211

GI number: 39996211

Start: 1195698

End: 1196171

Strand: Reverse

Name: 39996211

Synonym: GSU1109

Alternate gene names: NA

Gene position: 1196171-1195698 (Counterclockwise)

Preceding gene: 39996227

Following gene: 39996209

Centisome position: 31.36

GC content: 46.2

Gene sequence:

>474_bases
GTGCCCATGGGTCTTTTTCGAGAGAAAAAAGTAACTAATTACTTCTTCTCAGCCGGAGCAGCTTGGTCGGCCGGAGCCGG
AGCTTGGGCCGAAGTCATCGGAGCTTGGGCCGGGGCCGGAGCCGGAGCAGCCTGCTCGGCCGGAGCCGGAGCCGGAGCTT
CTTCTTTCTTCTTGCAGCCAGCAGCAAAAGCCACGGCCATAGCAAGGCACAGTGTCAGAGAAAGCAGCTTTTTCATTGAC
GTTTTCACCTCTTTTCCTTTGAAGTTGCCATTCTCGCGCGAGGCGCATGGTTTCTTAACACAACGGATGAGGAATATACT
CGCTTTAGAGATAAAGTCAAGATTTTTTTATACAGTATACAATTTTATTTTTTCACGAATTCAATACGTTAGCGAAACAA
AACTTAAAATTATTCTTATTTTTCATAGATTCAAGCACACAAATTTTATGTTCGTCATCTCTTCCATGGCGTAG

Upstream 100 bases:

>100_bases
TCTACCTCCAGTTACGCTTGTAAATAAAAAGACCGTATCGTTTACCATGTACGGACTTTGAAGTCAATCTCTTTGTCAGA
CAAAAAAAGACCCATGGACA

Downstream 100 bases:

>100_bases
CGGATACCTTCCCGCCCGAGTCCACTCTGCTTGTTACCGCCATAGGGCATATGATCGACCCTGAACGTCGGAATATCGTT
AATGATTACTCCTCCCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPMGLFREKKVTNYFFSAGAAWSAGAGAWAEVIGAWAGAGAGAACSAGAGAGASSFFLQPAAKATAIARHSVRESSFFID
VFTSFPLKLPFSREAHGFLTQRMRNILALEIKSRFFYTVYNFIFSRIQYVSETKLKIILIFHRFKHTNFMFVISSMA

Sequences:

>Translated_157_residues
MPMGLFREKKVTNYFFSAGAAWSAGAGAWAEVIGAWAGAGAGAACSAGAGAGASSFFLQPAAKATAIARHSVRESSFFID
VFTSFPLKLPFSREAHGFLTQRMRNILALEIKSRFFYTVYNFIFSRIQYVSETKLKIILIFHRFKHTNFMFVISSMA
>Mature_156_residues
PMGLFREKKVTNYFFSAGAAWSAGAGAWAEVIGAWAGAGAGAACSAGAGAGASSFFLQPAAKATAIARHSVRESSFFIDV
FTSFPLKLPFSREAHGFLTQRMRNILALEIKSRFFYTVYNFIFSRIQYVSETKLKIILIFHRFKHTNFMFVISSMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17316; Mature: 17185

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMGLFREKKVTNYFFSAGAAWSAGAGAWAEVIGAWAGAGAGAACSAGAGAGASSFFLQP
CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEECC
AAKATAIARHSVRESSFFIDVFTSFPLKLPFSREAHGFLTQRMRNILALEIKSRFFYTVY
HHHHHHHHHHHHHCHHEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NFIFSRIQYVSETKLKIILIFHRFKHTNFMFVISSMA
HHHHHHHHHHCCCCEEEEEEEEHHCCCCEEEEEECCC
>Mature Secondary Structure 
PMGLFREKKVTNYFFSAGAAWSAGAGAWAEVIGAWAGAGAGAACSAGAGAGASSFFLQP
CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEECC
AAKATAIARHSVRESSFFIDVFTSFPLKLPFSREAHGFLTQRMRNILALEIKSRFFYTVY
HHHHHHHHHHHHHCHHEEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NFIFSRIQYVSETKLKIILIFHRFKHTNFMFVISSMA
HHHHHHHHHHCCCCEEEEEEEEHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA