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The map label for this gene is 39996194

Identifier: 39996194

GI number: 39996194

Start: 1177364

End: 1179052

Strand: Reverse

Name: 39996194

Synonym: GSU1092

Alternate gene names: NA

Gene position: 1179052-1177364 (Counterclockwise)

Preceding gene: 39996195

Following gene: 39996191

Centisome position: 30.91

GC content: 65.54

Gene sequence:

>1689_bases
ATGATCAGGTCAAGCATCGACCTGATGCTCAAGACCGGGGCCGCGGCCCTGGCAAAGAACTTCGAGAACAGGGATCCGAT
TGCCGGTCAGCGGGAAATCCTCGCCCGACTCGTGGTAGCGGCCGCCGTCACCCGCTTCGGCCGCGACCATGGCTTCGCGG
AACTGGCAGGAGAGCCCTTCGACCGTCTCTATGCGGAATTCCGGCGCCGGGTGCCGATCCGCACCTATGCCGACTTCTGG
CGCGACTATTTCTCGGCGTGGCAGAGCGATGCCAACGGCAGCCAACGGCTCCTGCTGGAGGACGTGACCTGGCCCGGCAG
GATTCCCTTTTTCTGCGAGACCTCCGGCACCACGGCGCCCACCAAATACATCCCCTTTTCTCGGGAGATGTTCGCCGCCA
ACAAGCGGGCCGCCATTGATCTCACCGCCTGCTACCTGCACCGCACCCCCCGAAGCCGCCTGTTCCAGGGAAAGCTCCTC
TACATGGCCGGCAACACCAGCCTCACCGATCTGGGCAATGGGGTGCAAAGCGGCGACATGAGCGGCATCACCCTGCGCCA
TCGCCCCTTCTACCTGCGCCCCTTCGTGGCGCCGGGCATGGCGGTGTCGGCCCTGCCCTGGGAAGAAAAAGTGGTGGAAC
TGGCGGGGCTTCTGTTGTCGGACCGCTCCATCCGGGGCATCTCCGGCGTTCCTCCCTGGATCATCCTCCTCCTGCAGCGG
GTTGAAGAGATGGGGCACCGCCCCATTGCCGAGCTCCTTCCCAACCTGGAACTGATCATCCACGGGGGAACGAGCATGAA
ACCGTACCGCCGCGAATTCGACGGCCTCTTTCCCCGACGCCGGCCCCATTTCCTGGAGGTGCTCCCCTCCTCCGAGGCGT
TCATGGCCTTCCAACTGCCGGGCGAGGACCGGATGCGGCTCGTGCCCCACTACGGCGCCTTCTTCGAGTTCATCCCCATC
GAGGACCTCGACGAGGGGGGGACACCGGCCGCCGACGCGCCGACGGTTCCCCTGGAGGCGGTGGAGACCGGCCGGCGCTA
CGCCGTTATCCTCACCACCTGTGCGGGACTGTGGCGTTACCACATCGGCGACACCCTGCGTTTCACCGCCCTGTCCCCCC
ACTTCATCGAATTCACGGGACGGGACCGGTTTCTGGACCGGTTCGAGGAAAAGGTGACTCAGGGGGAGGTGGAGGAAGCG
GTGGCCCGGCTCAACCAACTGGACGGGATCGAGGTAAGGGAGTTCATGGTGGGCCCCGACATCGGGGAACGGCGCCACCT
GTGGGTACTGGCGGTGGGCGAAATGAACGAGCGGAGCGGCGACGTCCTGGGGAGACACCTGGACGCCACGCTCCGCTCGC
TGAATGCCGATTACGCCACGTTCCGGAGCCAGGGACGGATCGCCGGGCCCCGGGTCGTGACGGTGAGCGGGGATGTTATC
TACCGCTGGTCCAAAGAGGTGCGCGGCAAGCTGGGGGGACAGAGCAAGATCCCCCACGTGGACCCCACGGTGGAAGGTGA
AATGGTGGCAAGCCTTGCGGCCTTTGCCCGACGGTTTCAGGCCTGCTGGATCGCCGACAGCTTCCAGGGATTCGGCCCCA
CGGGCCGGGTAAAGGTCCAAAACTCCTCGAACTTCACCGGCTCCCGGTCGCTGCCGGAGAGAACCCGTCCCTCCTCGTCC
GTGGTGTAG

Upstream 100 bases:

>100_bases
TTCCCCATGCCTCGCTCATCTTTCACCATCACTGCTACAACCCCCTGATCGAGGCATGGTACGACCGTCTGGCGTCCCCC
CTGCGCATCGCGGTGGTTTC

Downstream 100 bases:

>100_bases
TCGAGAAGATTGGCCAGGAAACGGACCGTAATAAAGTCACAGCCTTCCTCCTGCCAGGCCTCCACGAGCTCCACCTGACG
CACGGCGATATTCTCCAGCC

Product: GH3 auxin-responsive promoter family protein

Products: NA

Alternate protein names: Auxin-Regulated Protein; GH3 Auxin-Responsive Promoter Family Protein; Gh3 Auxin-Responsive Promoter; Plant Auxin-Regulated Protein; Gh3 AuxiN-Responsive Promoter; GH3 Auxin-Responsive Promoter Superfamily Protein; Auxin-Regulated Like; GH3 Family Protein

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MIRSSIDLMLKTGAAALAKNFENRDPIAGQREILARLVVAAAVTRFGRDHGFAELAGEPFDRLYAEFRRRVPIRTYADFW
RDYFSAWQSDANGSQRLLLEDVTWPGRIPFFCETSGTTAPTKYIPFSREMFAANKRAAIDLTACYLHRTPRSRLFQGKLL
YMAGNTSLTDLGNGVQSGDMSGITLRHRPFYLRPFVAPGMAVSALPWEEKVVELAGLLLSDRSIRGISGVPPWIILLLQR
VEEMGHRPIAELLPNLELIIHGGTSMKPYRREFDGLFPRRRPHFLEVLPSSEAFMAFQLPGEDRMRLVPHYGAFFEFIPI
EDLDEGGTPAADAPTVPLEAVETGRRYAVILTTCAGLWRYHIGDTLRFTALSPHFIEFTGRDRFLDRFEEKVTQGEVEEA
VARLNQLDGIEVREFMVGPDIGERRHLWVLAVGEMNERSGDVLGRHLDATLRSLNADYATFRSQGRIAGPRVVTVSGDVI
YRWSKEVRGKLGGQSKIPHVDPTVEGEMVASLAAFARRFQACWIADSFQGFGPTGRVKVQNSSNFTGSRSLPERTRPSSS
VV

Sequences:

>Translated_562_residues
MIRSSIDLMLKTGAAALAKNFENRDPIAGQREILARLVVAAAVTRFGRDHGFAELAGEPFDRLYAEFRRRVPIRTYADFW
RDYFSAWQSDANGSQRLLLEDVTWPGRIPFFCETSGTTAPTKYIPFSREMFAANKRAAIDLTACYLHRTPRSRLFQGKLL
YMAGNTSLTDLGNGVQSGDMSGITLRHRPFYLRPFVAPGMAVSALPWEEKVVELAGLLLSDRSIRGISGVPPWIILLLQR
VEEMGHRPIAELLPNLELIIHGGTSMKPYRREFDGLFPRRRPHFLEVLPSSEAFMAFQLPGEDRMRLVPHYGAFFEFIPI
EDLDEGGTPAADAPTVPLEAVETGRRYAVILTTCAGLWRYHIGDTLRFTALSPHFIEFTGRDRFLDRFEEKVTQGEVEEA
VARLNQLDGIEVREFMVGPDIGERRHLWVLAVGEMNERSGDVLGRHLDATLRSLNADYATFRSQGRIAGPRVVTVSGDVI
YRWSKEVRGKLGGQSKIPHVDPTVEGEMVASLAAFARRFQACWIADSFQGFGPTGRVKVQNSSNFTGSRSLPERTRPSSS
VV
>Mature_562_residues
MIRSSIDLMLKTGAAALAKNFENRDPIAGQREILARLVVAAAVTRFGRDHGFAELAGEPFDRLYAEFRRRVPIRTYADFW
RDYFSAWQSDANGSQRLLLEDVTWPGRIPFFCETSGTTAPTKYIPFSREMFAANKRAAIDLTACYLHRTPRSRLFQGKLL
YMAGNTSLTDLGNGVQSGDMSGITLRHRPFYLRPFVAPGMAVSALPWEEKVVELAGLLLSDRSIRGISGVPPWIILLLQR
VEEMGHRPIAELLPNLELIIHGGTSMKPYRREFDGLFPRRRPHFLEVLPSSEAFMAFQLPGEDRMRLVPHYGAFFEFIPI
EDLDEGGTPAADAPTVPLEAVETGRRYAVILTTCAGLWRYHIGDTLRFTALSPHFIEFTGRDRFLDRFEEKVTQGEVEEA
VARLNQLDGIEVREFMVGPDIGERRHLWVLAVGEMNERSGDVLGRHLDATLRSLNADYATFRSQGRIAGPRVVTVSGDVI
YRWSKEVRGKLGGQSKIPHVDPTVEGEMVASLAAFARRFQACWIADSFQGFGPTGRVKVQNSSNFTGSRSLPERTRPSSS
VV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63024; Mature: 63024

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSSIDLMLKTGAAALAKNFENRDPIAGQREILARLVVAAAVTRFGRDHGFAELAGEPF
CCCCCHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCH
DRLYAEFRRRVPIRTYADFWRDYFSAWQSDANGSQRLLLEDVTWPGRIPFFCETSGTTAP
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCC
TKYIPFSREMFAANKRAAIDLTACYLHRTPRSRLFQGKLLYMAGNTSLTDLGNGVQSGDM
CCCCCCCHHHHHCCCCCEEEEEEHHHHCCCHHHHCCCEEEEEECCCCHHHHCCCCCCCCC
SGITLRHRPFYLRPFVAPGMAVSALPWEEKVVELAGLLLSDRSIRGISGVPPWIILLLQR
CCEEEECCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
VEEMGHRPIAELLPNLELIIHGGTSMKPYRREFDGLFPRRRPHFLEVLPSSEAFMAFQLP
HHHHCCCCHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCEEEEECC
GEDRMRLVPHYGAFFEFIPIEDLDEGGTPAADAPTVPLEAVETGRRYAVILTTCAGLWRY
CCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEHHHHHHHH
HIGDTLRFTALSPHFIEFTGRDRFLDRFEEKVTQGEVEEAVARLNQLDGIEVREFMVGPD
HCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHEEECCC
IGERRHLWVLAVGEMNERSGDVLGRHLDATLRSLNADYATFRSQGRIAGPRVVTVSGDVI
CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCEE
YRWSKEVRGKLGGQSKIPHVDPTVEGEMVASLAAFARRFQACWIADSFQGFGPTGRVKVQ
EEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEE
NSSNFTGSRSLPERTRPSSSVV
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRSSIDLMLKTGAAALAKNFENRDPIAGQREILARLVVAAAVTRFGRDHGFAELAGEPF
CCCCCHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCH
DRLYAEFRRRVPIRTYADFWRDYFSAWQSDANGSQRLLLEDVTWPGRIPFFCETSGTTAP
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCC
TKYIPFSREMFAANKRAAIDLTACYLHRTPRSRLFQGKLLYMAGNTSLTDLGNGVQSGDM
CCCCCCCHHHHHCCCCCEEEEEEHHHHCCCHHHHCCCEEEEEECCCCHHHHCCCCCCCCC
SGITLRHRPFYLRPFVAPGMAVSALPWEEKVVELAGLLLSDRSIRGISGVPPWIILLLQR
CCEEEECCCEEECCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
VEEMGHRPIAELLPNLELIIHGGTSMKPYRREFDGLFPRRRPHFLEVLPSSEAFMAFQLP
HHHHCCCCHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCEEEEECC
GEDRMRLVPHYGAFFEFIPIEDLDEGGTPAADAPTVPLEAVETGRRYAVILTTCAGLWRY
CCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEHHHHHHHH
HIGDTLRFTALSPHFIEFTGRDRFLDRFEEKVTQGEVEEAVARLNQLDGIEVREFMVGPD
HCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHEEECCC
IGERRHLWVLAVGEMNERSGDVLGRHLDATLRSLNADYATFRSQGRIAGPRVVTVSGDVI
CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCEE
YRWSKEVRGKLGGQSKIPHVDPTVEGEMVASLAAFARRFQACWIADSFQGFGPTGRVKVQ
EEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEE
NSSNFTGSRSLPERTRPSSSVV
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA