| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996192
Identifier: 39996192
GI number: 39996192
Start: 1175619
End: 1176356
Strand: Direct
Name: 39996192
Synonym: GSU1090
Alternate gene names: NA
Gene position: 1175619-1176356 (Clockwise)
Preceding gene: 39996190
Following gene: 39996193
Centisome position: 30.82
GC content: 60.43
Gene sequence:
>738_bases ATGAGTGATTCAGCGAAGCAGCCGGAACTCTGGCTGATGGGATTGGGATGTGAGGAAGAGCGTTCGACCGCAGTGCTCGA CTATCTCAGGCATGCGGGCTATTCGGTGGTGTGCAGGGGAAGGGACGATTTCGGCGACACCAAGCCCCTTGGCGTGGTCC TCGACGTTTCACCGTTCTCCCACGACGGCTGGGGAATCCTGCTGGATATCAAGAACAATCCGGCCACCCGCGATGTGCCG ATCCTGCCGGTCTACCTGAGCCAGGAGGGAAAGATTGGGGGCGTTTTCCCGGCCGCCGGCTTTTTCACCCTCCCCATCGA CACCGATTACATGATGAAGAAGCTTACGGTCCTGGGGCTGACCGATGAGGCGGATACCTGGGACCTCCAGGTGATGGTGA TCTCCAAGAAGGGGGAGGAGAGCGTTGCCAAGGCCATCACCTCCCTCGGCTTCGAGGTGGTCAACGCCTACACGGGCAAG GAGGCCGTGGCCCTTGCCACCACGGGCCGCGCTTACATGATCTTCTGTTCGGTCACGCTGCCGGACATGCACTCCTTCGA GCTGTTGGAGCGCTTCCGGCTCTATCCGCAGGTCCGTAACGTTCCGTTCTTCGTGCTTGTAAAAGATGCCATGAAGGAGG GTGAACGGCTGGCCCTGTCCCGCCAGATGGACCACCTGGTGCGGAAGAAGGAGCTGTCGCGGGACGAGTTTCTGGCATAT CTGCGCAGGCGGGGATAG
Upstream 100 bases:
>100_bases CAACGTCAACAGCCGGTTATCGCTAACTTTTCCTTGCGGTCGGTATAAATTTTGTTATGTTGTTAATTAATAAATCAGCC GCCACAGATCGGGGGATGCC
Downstream 100 bases:
>100_bases CGGCCGACCCGCTTCCCTGATGCAGTGCAGCCGGCTTCCCGGAAGGGGAGCCGGCTGTTTCGTGGTCGGGATACTGAACG CTCGATACCGGGCAACCCGG
Product: signal transduction protein
Products: NA
Alternate protein names: Response Regulator Receiver Protein; Sensor Histidine Kinase/Response Regulator; Two-Component Hybrid Sensor And Regulator; Two-Component Signal Transduction Sensor Histidine Kinase; GAF Sensor Hybrid Histidine Kinase; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Sensor Histidine Kinase/Respose Regulator; Response Regulator/Receiver; Sensor Protein; Cache Sensor Hybrid Histidine Kinase; Response Receiver; PAS/PAC Sensor Hybrid Histidine Kinase; Two-Component System Sensory Histidine Kinase; Signal Transduction Protein-Related Protein; Sensory Transduction Histidine Kinase; Two Component System Histidine Kinase
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSDSAKQPELWLMGLGCEEERSTAVLDYLRHAGYSVVCRGRDDFGDTKPLGVVLDVSPFSHDGWGILLDIKNNPATRDVP ILPVYLSQEGKIGGVFPAAGFFTLPIDTDYMMKKLTVLGLTDEADTWDLQVMVISKKGEESVAKAITSLGFEVVNAYTGK EAVALATTGRAYMIFCSVTLPDMHSFELLERFRLYPQVRNVPFFVLVKDAMKEGERLALSRQMDHLVRKKELSRDEFLAY LRRRG
Sequences:
>Translated_245_residues MSDSAKQPELWLMGLGCEEERSTAVLDYLRHAGYSVVCRGRDDFGDTKPLGVVLDVSPFSHDGWGILLDIKNNPATRDVP ILPVYLSQEGKIGGVFPAAGFFTLPIDTDYMMKKLTVLGLTDEADTWDLQVMVISKKGEESVAKAITSLGFEVVNAYTGK EAVALATTGRAYMIFCSVTLPDMHSFELLERFRLYPQVRNVPFFVLVKDAMKEGERLALSRQMDHLVRKKELSRDEFLAY LRRRG >Mature_244_residues SDSAKQPELWLMGLGCEEERSTAVLDYLRHAGYSVVCRGRDDFGDTKPLGVVLDVSPFSHDGWGILLDIKNNPATRDVPI LPVYLSQEGKIGGVFPAAGFFTLPIDTDYMMKKLTVLGLTDEADTWDLQVMVISKKGEESVAKAITSLGFEVVNAYTGKE AVALATTGRAYMIFCSVTLPDMHSFELLERFRLYPQVRNVPFFVLVKDAMKEGERLALSRQMDHLVRKKELSRDEFLAYL RRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27477; Mature: 27346
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSAKQPELWLMGLGCEEERSTAVLDYLRHAGYSVVCRGRDDFGDTKPLGVVLDVSPFS CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCC HDGWGILLDIKNNPATRDVPILPVYLSQEGKIGGVFPAAGFFTLPIDTDYMMKKLTVLGL CCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEECCCCEEEECCCHHHHHHEEEEEEE TDEADTWDLQVMVISKKGEESVAKAITSLGFEVVNAYTGKEAVALATTGRAYMIFCSVTL CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEC PDMHSFELLERFRLYPQVRNVPFFVLVKDAMKEGERLALSRQMDHLVRKKELSRDEFLAY CCCHHHHHHHHHHHCHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH LRRRG HHHCC >Mature Secondary Structure SDSAKQPELWLMGLGCEEERSTAVLDYLRHAGYSVVCRGRDDFGDTKPLGVVLDVSPFS CCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCC HDGWGILLDIKNNPATRDVPILPVYLSQEGKIGGVFPAAGFFTLPIDTDYMMKKLTVLGL CCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEECCCCEEEECCCHHHHHHEEEEEEE TDEADTWDLQVMVISKKGEESVAKAITSLGFEVVNAYTGKEAVALATTGRAYMIFCSVTL CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEC PDMHSFELLERFRLYPQVRNVPFFVLVKDAMKEGERLALSRQMDHLVRKKELSRDEFLAY CCCHHHHHHHHHHHCHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH LRRRG HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA