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The map label for this gene is yebC [C]

Identifier: 39996176

GI number: 39996176

Start: 1163086

End: 1163829

Strand: Direct

Name: yebC [C]

Synonym: GSU1074

Alternate gene names: 39996176

Gene position: 1163086-1163829 (Clockwise)

Preceding gene: 39996168

Following gene: 39996177

Centisome position: 30.49

GC content: 59.54

Gene sequence:

>744_bases
ATGTCGGGACATAATAAATGGAGCACCATCAGGCATAAGAAGGGGGCGGCCGACGCCAAGCGCGGCAAGGTGTTCACCAA
GCTGATCAAGGAGATCACCGTTGCCGCCAAGATCGGCGGTGGCGACCCGAACGGCAATCCGCGCCTGCGTGCCGCCGTCG
ACAAGGCCAAAGCCGAGAACATGCCCAAGGACAACATCGAGCGGGCCATCAAGAAGGGGACTGGCGAACTCGAGGGGGTC
AGCTACGAAGAGATCATCTACGAAGGATACGGTCCCGGCGGCGTGGCGGTGCTGGTAGAGTGCATGACCGACAACCGTAA
CCGTACGGTCGGCGAGGTGCGGAGCACCTTCACCAAGTGCAACGGCAACATGGGCGAGGCGGGGTGCGTTTCGTGGATGT
TCGACAAGAAAGGGCTCATTGTCCTGTCCAAGGACGTTGATTTCGAAAAGCTCTTCGAGACGGCCCTTGAGGCCGGCGCG
GACGACGTGGCGGACGAAGAGGAGCAGTACGAGGTGCTCACCGACCCGGCAGCGTTCATTGACGTGCGCGAGGCACTCGA
AAAGGCCGGCTTCCCCTTCGAATCCGCCGAAATCACCATGATTCCCCAGACCATGGTGAAACTTGACGGCAAGAATGCCG
AGAACATGCTCAAGCTCATGGACCGCCTCGAGGACAACGACGACGTCCAGAACGTCTACGCCAACTTCGACATCTCCACG
GAGGAGATGGAAAAGCTCATGTAG

Upstream 100 bases:

>100_bases
TTTTACATGAAGTTTGGGCCTTTACAACCCGGAATTTCCCATGATAGTATCACCCGATTTGAGGCCGGTGGCTGATTTTG
GGAACAGGAGGATCAACCGC

Downstream 100 bases:

>100_bases
GCGGGCCCTGCCACCCCCGGTTGGTTCAAGCGCGGAAGTCGGAAGCCGGGTCTTTCCTTTCGCGCCTTTTTTCTGCTGTG
CTCTCCGCGCCCTCTGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSGHNKWSTIRHKKGAADAKRGKVFTKLIKEITVAAKIGGGDPNGNPRLRAAVDKAKAENMPKDNIERAIKKGTGELEGV
SYEEIIYEGYGPGGVAVLVECMTDNRNRTVGEVRSTFTKCNGNMGEAGCVSWMFDKKGLIVLSKDVDFEKLFETALEAGA
DDVADEEEQYEVLTDPAAFIDVREALEKAGFPFESAEITMIPQTMVKLDGKNAENMLKLMDRLEDNDDVQNVYANFDIST
EEMEKLM

Sequences:

>Translated_247_residues
MSGHNKWSTIRHKKGAADAKRGKVFTKLIKEITVAAKIGGGDPNGNPRLRAAVDKAKAENMPKDNIERAIKKGTGELEGV
SYEEIIYEGYGPGGVAVLVECMTDNRNRTVGEVRSTFTKCNGNMGEAGCVSWMFDKKGLIVLSKDVDFEKLFETALEAGA
DDVADEEEQYEVLTDPAAFIDVREALEKAGFPFESAEITMIPQTMVKLDGKNAENMLKLMDRLEDNDDVQNVYANFDIST
EEMEKLM
>Mature_246_residues
SGHNKWSTIRHKKGAADAKRGKVFTKLIKEITVAAKIGGGDPNGNPRLRAAVDKAKAENMPKDNIERAIKKGTGELEGVS
YEEIIYEGYGPGGVAVLVECMTDNRNRTVGEVRSTFTKCNGNMGEAGCVSWMFDKKGLIVLSKDVDFEKLFETALEAGAD
DVADEEEQYEVLTDPAAFIDVREALEKAGFPFESAEITMIPQTMVKLDGKNAENMLKLMDRLEDNDDVQNVYANFDISTE
EMEKLM

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=34.412955465587, Blast_Score=145, Evalue=4e-35,
Organism=Escherichia coli, GI1788171, Length=242, Percent_Identity=52.8925619834711, Blast_Score=264, Evalue=5e-72,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=40.7725321888412, Blast_Score=155, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=25.4098360655738, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=37.2623574144487, Blast_Score=144, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24583305, Length=251, Percent_Identity=25.0996015936255, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1074_GEOSL (P62036)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_952127.1
- ProteinModelPortal:   P62036
- SMR:   P62036
- GeneID:   2688637
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU1074
- NMPDR:   fig|243231.1.peg.1065
- TIGR:   GSU1074
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   GSUL243231:GSU_1074-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27256; Mature: 27125

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHNKWSTIRHKKGAADAKRGKVFTKLIKEITVAAKIGGGDPNGNPRLRAAVDKAKAEN
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCC
MPKDNIERAIKKGTGELEGVSYEEIIYEGYGPGGVAVLVECMTDNRNRTVGEVRSTFTKC
CCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHC
NGNMGEAGCVSWMFDKKGLIVLSKDVDFEKLFETALEAGADDVADEEEQYEVLTDPAAFI
CCCCCCHHHEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHH
DVREALEKAGFPFESAEITMIPQTMVKLDGKNAENMLKLMDRLEDNDDVQNVYANFDIST
HHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCH
EEMEKLM
HHHHHCC
>Mature Secondary Structure 
SGHNKWSTIRHKKGAADAKRGKVFTKLIKEITVAAKIGGGDPNGNPRLRAAVDKAKAEN
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCC
MPKDNIERAIKKGTGELEGVSYEEIIYEGYGPGGVAVLVECMTDNRNRTVGEVRSTFTKC
CCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHC
NGNMGEAGCVSWMFDKKGLIVLSKDVDFEKLFETALEAGADDVADEEEQYEVLTDPAAFI
CCCCCCHHHEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHH
DVREALEKAGFPFESAEITMIPQTMVKLDGKNAENMLKLMDRLEDNDDVQNVYANFDIST
HHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCH
EEMEKLM
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA