| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996171
Identifier: 39996171
GI number: 39996171
Start: 1157898
End: 1158206
Strand: Reverse
Name: 39996171
Synonym: GSU1069
Alternate gene names: NA
Gene position: 1158206-1157898 (Counterclockwise)
Preceding gene: 308513294
Following gene: 308513293
Centisome position: 30.37
GC content: 55.02
Gene sequence:
>309_bases ATGGCAGAAAAGCAGTATAACTGGAGCGCCATTGCGAAGAACCCCAAGTTCATCGAGCTCCACCGGAAGAAGACCACCTT CCTTGTTGGCTGGTGGGTCTTTTCGACCGTTTTCTATTTCCTCCTCCCCATCGGCGCAGCCTATGCCCCCGGCCTCTTCA AAATCAAGATCCTGGGAAGGATCAACTTCGGCTACCTGTTCGCCCTTTCCCAGTTCTTCGTCTCCTGGGGGATCGCCATG TACTACGCCCATGTGGCCAACAAAGACTTCGACCGGCTCACCCGCGAGCTGGTGGATGAGCTGAAGTAA
Upstream 100 bases:
>100_bases GAGGACAGCAAACCGAAACCGAGGACATCACAAGCGCTTCGGCTCAGGGCGGGACGCCGCTCTCGATGCGCTTACCACAC ATGAAAGGAGTAACTGAACC
Downstream 100 bases:
>100_bases GGAGGAATGAACCCGATGAAGAGACTCATTGCAGCGTTTTCCCTTGCCCTGTCGCTGGGCACATTCGCTTGGGCCAGCGA GCCGGTCAAAGTACCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MAEKQYNWSAIAKNPKFIELHRKKTTFLVGWWVFSTVFYFLLPIGAAYAPGLFKIKILGRINFGYLFALSQFFVSWGIAM YYAHVANKDFDRLTRELVDELK
Sequences:
>Translated_102_residues MAEKQYNWSAIAKNPKFIELHRKKTTFLVGWWVFSTVFYFLLPIGAAYAPGLFKIKILGRINFGYLFALSQFFVSWGIAM YYAHVANKDFDRLTRELVDELK >Mature_101_residues AEKQYNWSAIAKNPKFIELHRKKTTFLVGWWVFSTVFYFLLPIGAAYAPGLFKIKILGRINFGYLFALSQFFVSWGIAMY YAHVANKDFDRLTRELVDELK
Specific function: Unknown
COG id: COG3162
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11979; Mature: 11848
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKQYNWSAIAKNPKFIELHRKKTTFLVGWWVFSTVFYFLLPIGAAYAPGLFKIKILGR CCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE INFGYLFALSQFFVSWGIAMYYAHVANKDFDRLTRELVDELK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure AEKQYNWSAIAKNPKFIELHRKKTTFLVGWWVFSTVFYFLLPIGAAYAPGLFKIKILGR CCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE INFGYLFALSQFFVSWGIAMYYAHVANKDFDRLTRELVDELK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA