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The map label for this gene is 39996084

Identifier: 39996084

GI number: 39996084

Start: 1057071

End: 1057688

Strand: Direct

Name: 39996084

Synonym: GSU0981

Alternate gene names: NA

Gene position: 1057071-1057688 (Clockwise)

Preceding gene: 39996083

Following gene: 39996085

Centisome position: 27.71

GC content: 66.02

Gene sequence:

>618_bases
ATGGCCCTTGAGAAGGCAAAGCTCGTGAACGCCGACACCGGCGAGGAGGTGGCGGTCCTGTTCAATCCCACCGAGTACGC
GGTGGAAAAGGGGAACCAGTACGCGGAAATCGCCATCCCCGGGCTGGAGGCGCCGTTGCTCCAGTTCAGCCGGGGAACTG
CCCGTACCCTGACCATGGATCTCTTTCTCGATACCTCTGAGACGGGGCAGGATGTGCGGGTTCACACCAAGCGGATCACC
TCGTTCCTGGACATCGATCCCGAGACCCATGCCCCGCCCGTCTGCCGCTTCGTCTGGGGAGGCGGCGAGAGCTTCACCGG
CGTGCTGGAGCGGGCCACCCAGCGGTTCACCATGTTTCTGGCCGACGGGACCCCCGTGCGGGCCACGGTGGGGGTGGCGC
TGAAGGAGTTCCGGACCGGCCTCAACCGGGAAAAGCCGCTCCAGTCGCCGGACCGGACCAAAGTAAGAACCATGGGGGAG
GGTGACAGTCTCTGGCTTCTGGCTGCCCGGGAATACGGGGACCCGGCCCAGTGGCGGTTCATCGCCCGGGAGAGCGGCAT
CGTCAATCCGCGGCGGGTGAAGGCCGGCACCGACCTGGTCATTCCCCCCATCGAGTGA

Upstream 100 bases:

>100_bases
AGTGGATGTGAATCGGCTGGCCGACGAGGTCTGCCGGGTGATCGAACGGAGACTCGTCACCGAACGGGAACGGCGGGGAC
GATGAGGGGAGGTGCGGGGC

Downstream 100 bases:

>100_bases
GCCATGGCCGATGAAACGATCAGTCTCGATTACTATGCGCCCCGCTTCCGGGTTGAGATCGACGGCGAGACGATCCCCCA
GGACGGGATCGTGAGCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: LysM Domain Protein

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MALEKAKLVNADTGEEVAVLFNPTEYAVEKGNQYAEIAIPGLEAPLLQFSRGTARTLTMDLFLDTSETGQDVRVHTKRIT
SFLDIDPETHAPPVCRFVWGGGESFTGVLERATQRFTMFLADGTPVRATVGVALKEFRTGLNREKPLQSPDRTKVRTMGE
GDSLWLLAAREYGDPAQWRFIARESGIVNPRRVKAGTDLVIPPIE

Sequences:

>Translated_205_residues
MALEKAKLVNADTGEEVAVLFNPTEYAVEKGNQYAEIAIPGLEAPLLQFSRGTARTLTMDLFLDTSETGQDVRVHTKRIT
SFLDIDPETHAPPVCRFVWGGGESFTGVLERATQRFTMFLADGTPVRATVGVALKEFRTGLNREKPLQSPDRTKVRTMGE
GDSLWLLAAREYGDPAQWRFIARESGIVNPRRVKAGTDLVIPPIE
>Mature_204_residues
ALEKAKLVNADTGEEVAVLFNPTEYAVEKGNQYAEIAIPGLEAPLLQFSRGTARTLTMDLFLDTSETGQDVRVHTKRITS
FLDIDPETHAPPVCRFVWGGGESFTGVLERATQRFTMFLADGTPVRATVGVALKEFRTGLNREKPLQSPDRTKVRTMGEG
DSLWLLAAREYGDPAQWRFIARESGIVNPRRVKAGTDLVIPPIE

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22676; Mature: 22545

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALEKAKLVNADTGEEVAVLFNPTEYAVEKGNQYAEIAIPGLEAPLLQFSRGTARTLTMD
CCCCCCEEECCCCCCEEEEEECCHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCEEEEEE
LFLDTSETGQDVRVHTKRITSFLDIDPETHAPPVCRFVWGGGESFTGVLERATQRFTMFL
EEEECCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEEEEE
ADGTPVRATVGVALKEFRTGLNREKPLQSPDRTKVRTMGEGDSLWLLAAREYGDPAQWRF
ECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCEEE
IARESGIVNPRRVKAGTDLVIPPIE
EECCCCCCCCCEECCCCCEEECCCC
>Mature Secondary Structure 
ALEKAKLVNADTGEEVAVLFNPTEYAVEKGNQYAEIAIPGLEAPLLQFSRGTARTLTMD
CCCCCEEECCCCCCEEEEEECCHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCEEEEEE
LFLDTSETGQDVRVHTKRITSFLDIDPETHAPPVCRFVWGGGESFTGVLERATQRFTMFL
EEEECCCCCCCEEHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEEEEE
ADGTPVRATVGVALKEFRTGLNREKPLQSPDRTKVRTMGEGDSLWLLAAREYGDPAQWRF
ECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCEEE
IARESGIVNPRRVKAGTDLVIPPIE
EECCCCCCCCCEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA