| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996083
Identifier: 39996083
GI number: 39996083
Start: 1055865
End: 1057055
Strand: Direct
Name: 39996083
Synonym: GSU0980
Alternate gene names: NA
Gene position: 1055865-1057055 (Clockwise)
Preceding gene: 39996082
Following gene: 39996084
Centisome position: 27.68
GC content: 68.51
Gene sequence:
>1191_bases ATGACCCTTGCCGAGCGGATCACGGAAAGATGCAGCTGGCGGAGAGCGGCCGGCCGTCGCGGTTGCCCCGGTACGGTTTC GCTGCTTACACCCGAGCGGCTGATGGGCCGTTACCTGCGGGGGCCCATGACGCTTACGCCGGTGCCGCTGGTGCATCCGG GGCGGACCGGGCGCCTTGACCTGAGCCTGTCGCTCCGGTTCTTCTGGCAGACGAATGGTTCTCTGGTCATGGGACGACCC ACAGGAGAGCTGCCGGTTTCCAGTGTGTTGCGACACGGCGGAACAGCGATGGCGCCAGCGGGTCCGGTTGAACAGGGGCC GGGTGCATCGGCCGCCGGCAGGGGGAGTGATACGGCAGCCCGCTTTGTCCATTCTGCCGGCGGTCTGCCCCGTTGCCTGG ACGGGGAGATACTACGCACCATCCTCGGCAGGTTTGAAGACGTGAGGGTACGGGATCTGGGGCCGGGACGGCGGGAAGAT GGCCGGAACCACCGGCAAGATAGGGATTCATTCTCACGGGCGGCGATAGTGGGGATGGTTACCATGTCGACGTCCGGCTG GGGCAGGATTCTGCCGGCTCACCGTCGTGAACAGTCCGTAGGGGGGAACGTTTTCCCGCACCGGGCCGTCCGCATGATGC GGCGTACACCCGCCGGAGTAGCCGCAACTCAGCCCCTGGGTGAAAAGAGCCACGCCAGTGGGGATCATCCGGCAGTCGTG TCGGGGCGGTCTTTCTCCGCCGGGCAGCGGTTGTCGGCGCCACGGACCCGGCTGATTGGCACGGTCCGGCCCCTCGGTGG CCTTGCTGCCATGGGAAAGCGCAGCGGCTCCGCAGGGGGGCCGGCAAGAGTCGGTACGGCCTCCCTGCCGGAGAGGGGGA CGGTTGCCGGTTCAGCTGCCATGGATCAGCGCCGGCGGGGGATGGTGTCTCCGGTGCCCGCCGACGCTTTGGAGAAAGAA CTTGTCCTGACCCACGCGATGGCCGGCCCCGTGAGCCGGTCGGCCCTTGTCTCCCGCCCTCCGGCAGCCGTGCCGGCTAA CGCTGTGCCCTTTGCCGGGCCGGTGGCGGCGGAGACGGGGCGGGTGGCGCGGGCACCGGCTGCCGCAGTGGATGTGAATC GGCTGGCCGACGAGGTCTGCCGGGTGATCGAACGGAGACTCGTCACCGAACGGGAACGGCGGGGACGATGA
Upstream 100 bases:
>100_bases TCCGGTCAAGTGGGAAGGGCCGGAACTGAAGGCCGACGGCAATGCCACGGCCATTGAGAAGGTGGAGCTGGTGCACAACG GGCTGAAGGTGGAGTAACCC
Downstream 100 bases:
>100_bases GGGGAGGTGCGGGGCATGGCCCTTGAGAAGGCAAAGCTCGTGAACGCCGACACCGGCGAGGAGGTGGCGGTCCTGTTCAA TCCCACCGAGTACGCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTLAERITERCSWRRAAGRRGCPGTVSLLTPERLMGRYLRGPMTLTPVPLVHPGRTGRLDLSLSLRFFWQTNGSLVMGRP TGELPVSSVLRHGGTAMAPAGPVEQGPGASAAGRGSDTAARFVHSAGGLPRCLDGEILRTILGRFEDVRVRDLGPGRRED GRNHRQDRDSFSRAAIVGMVTMSTSGWGRILPAHRREQSVGGNVFPHRAVRMMRRTPAGVAATQPLGEKSHASGDHPAVV SGRSFSAGQRLSAPRTRLIGTVRPLGGLAAMGKRSGSAGGPARVGTASLPERGTVAGSAAMDQRRRGMVSPVPADALEKE LVLTHAMAGPVSRSALVSRPPAAVPANAVPFAGPVAAETGRVARAPAAAVDVNRLADEVCRVIERRLVTERERRGR
Sequences:
>Translated_396_residues MTLAERITERCSWRRAAGRRGCPGTVSLLTPERLMGRYLRGPMTLTPVPLVHPGRTGRLDLSLSLRFFWQTNGSLVMGRP TGELPVSSVLRHGGTAMAPAGPVEQGPGASAAGRGSDTAARFVHSAGGLPRCLDGEILRTILGRFEDVRVRDLGPGRRED GRNHRQDRDSFSRAAIVGMVTMSTSGWGRILPAHRREQSVGGNVFPHRAVRMMRRTPAGVAATQPLGEKSHASGDHPAVV SGRSFSAGQRLSAPRTRLIGTVRPLGGLAAMGKRSGSAGGPARVGTASLPERGTVAGSAAMDQRRRGMVSPVPADALEKE LVLTHAMAGPVSRSALVSRPPAAVPANAVPFAGPVAAETGRVARAPAAAVDVNRLADEVCRVIERRLVTERERRGR >Mature_395_residues TLAERITERCSWRRAAGRRGCPGTVSLLTPERLMGRYLRGPMTLTPVPLVHPGRTGRLDLSLSLRFFWQTNGSLVMGRPT GELPVSSVLRHGGTAMAPAGPVEQGPGASAAGRGSDTAARFVHSAGGLPRCLDGEILRTILGRFEDVRVRDLGPGRREDG RNHRQDRDSFSRAAIVGMVTMSTSGWGRILPAHRREQSVGGNVFPHRAVRMMRRTPAGVAATQPLGEKSHASGDHPAVVS GRSFSAGQRLSAPRTRLIGTVRPLGGLAAMGKRSGSAGGPARVGTASLPERGTVAGSAAMDQRRRGMVSPVPADALEKEL VLTHAMAGPVSRSALVSRPPAAVPANAVPFAGPVAAETGRVARAPAAAVDVNRLADEVCRVIERRLVTERERRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41868; Mature: 41736
Theoretical pI: Translated: 12.24; Mature: 12.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAERITERCSWRRAAGRRGCPGTVSLLTPERLMGRYLRGPMTLTPVPLVHPGRTGRLD CCHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCEECCCCEECCCCCCEEE LSLSLRFFWQTNGSLVMGRPTGELPVSSVLRHGGTAMAPAGPVEQGPGASAAGRGSDTAA EEEEEEEEEECCCCEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH RFVHSAGGLPRCLDGEILRTILGRFEDVRVRDLGPGRREDGRNHRQDRDSFSRAAIVGMV HHHHHCCCCCCCCCHHHHHHHHCCHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEE TMSTSGWGRILPAHRREQSVGGNVFPHRAVRMMRRTPAGVAATQPLGEKSHASGDHPAVV EECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE SGRSFSAGQRLSAPRTRLIGTVRPLGGLAAMGKRSGSAGGPARVGTASLPERGTVAGSAA CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH MDQRRRGMVSPVPADALEKELVLTHAMAGPVSRSALVSRPPAAVPANAVPFAGPVAAETG HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHCCC RVARAPAAAVDVNRLADEVCRVIERRLVTERERRGR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLAERITERCSWRRAAGRRGCPGTVSLLTPERLMGRYLRGPMTLTPVPLVHPGRTGRLD CHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHCCCCEECCCCEECCCCCCEEE LSLSLRFFWQTNGSLVMGRPTGELPVSSVLRHGGTAMAPAGPVEQGPGASAAGRGSDTAA EEEEEEEEEECCCCEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH RFVHSAGGLPRCLDGEILRTILGRFEDVRVRDLGPGRREDGRNHRQDRDSFSRAAIVGMV HHHHHCCCCCCCCCHHHHHHHHCCHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEE TMSTSGWGRILPAHRREQSVGGNVFPHRAVRMMRRTPAGVAATQPLGEKSHASGDHPAVV EECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE SGRSFSAGQRLSAPRTRLIGTVRPLGGLAAMGKRSGSAGGPARVGTASLPERGTVAGSAA CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH MDQRRRGMVSPVPADALEKELVLTHAMAGPVSRSALVSRPPAAVPANAVPFAGPVAAETG HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHCCC RVARAPAAAVDVNRLADEVCRVIERRLVTERERRGR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA