| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996077
Identifier: 39996077
GI number: 39996077
Start: 1051419
End: 1052267
Strand: Direct
Name: 39996077
Synonym: GSU0974
Alternate gene names: NA
Gene position: 1051419-1052267 (Clockwise)
Preceding gene: 39996076
Following gene: 39996078
Centisome position: 27.57
GC content: 69.49
Gene sequence:
>849_bases ATGACCGAGGCAGTGATGCTCCAGCCGCCCGACCGGTCCGTGAGCCGCCTTTCCTTCGCGATGCGGCTGGTGGATGACTT CGCGCCGGAGCGGGAGCCTCCGGCCGGGGTAGCGGTGACGCTCACGGGAGGCGGGACCCAGGGCATTCGCAACCCCGGCG GGTGGCACCTCTTCATGGATCTGCCGCCGGGAACGTACCGGGTGAGTGCCCGGTCAGAGCTCTACCTGGCGGAGGAGAAG GAGATCGACACCGCGCTGCTGGATCCCGGCCTGCCGGTGGTGGAGCTGCTGCTTAAGCCGTCCGCTGCCTACCCGTTTCC ACCCGGAACCACGCTGGTCCGTGGCGTGGTGAGGAACGAAGCGGGGCAGGACGTGCCGGATGCCCGGGTGGAGGCGGTTC CCTGGATGCCGGTGCCATCGGTGAAGGGGCGGGTGCGGCAGGGTGGCGCCCAGGCGGGCCAGCCGACCATCCGCCTTGAG CACCTGTCGGGAGGACTGGCCGCGGGCGACATGCTGCTGGTCAGGGATGGAGACCCCTCCCGCCAGGAGATCGTCCGGAT CGCGGCGCCGCTGCCGTCCAACGCCTCGCAGCCGTTCACCCTGGCGGCGCCGCTCCGTTTCGGCCATGCCGCGGGCACCT CGGTCCACCTTCTGGCGGCTGCCGCGCCCTTCACCACCGCCACGGCCGGCACCGGGGAATTCGTTGTCTACCAGAGGAAC GCATCCGCCCGGCTGTTCGTTATCAGGCTCAGTACGAGCGTAGCGGGATACCTGCCGGACGAGCGGGATCTGGAGATCGC CGAGGGTACGACCCAATCTGTGGGAGTGATCAGCCTGCACCAGCTCTGA
Upstream 100 bases:
>100_bases GGTACCAGGTGACCCCGGTGGCCATTGATTCCACCCGGTCCACCGGCGGGAAACCCGTGGTGGAGAGGACCCTGGAGTAC TACCAGAAAGGGGCCGGGTT
Downstream 100 bases:
>100_bases TCCTGAATCCGGCAATGCTCAACTGCCGAATAGAGGCTGATTGATCATAGGGGAACACACTGAAAGGAGGAATACGCGAT GCCCGAATATCTGTCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTEAVMLQPPDRSVSRLSFAMRLVDDFAPEREPPAGVAVTLTGGGTQGIRNPGGWHLFMDLPPGTYRVSARSELYLAEEK EIDTALLDPGLPVVELLLKPSAAYPFPPGTTLVRGVVRNEAGQDVPDARVEAVPWMPVPSVKGRVRQGGAQAGQPTIRLE HLSGGLAAGDMLLVRDGDPSRQEIVRIAAPLPSNASQPFTLAAPLRFGHAAGTSVHLLAAAAPFTTATAGTGEFVVYQRN ASARLFVIRLSTSVAGYLPDERDLEIAEGTTQSVGVISLHQL
Sequences:
>Translated_282_residues MTEAVMLQPPDRSVSRLSFAMRLVDDFAPEREPPAGVAVTLTGGGTQGIRNPGGWHLFMDLPPGTYRVSARSELYLAEEK EIDTALLDPGLPVVELLLKPSAAYPFPPGTTLVRGVVRNEAGQDVPDARVEAVPWMPVPSVKGRVRQGGAQAGQPTIRLE HLSGGLAAGDMLLVRDGDPSRQEIVRIAAPLPSNASQPFTLAAPLRFGHAAGTSVHLLAAAAPFTTATAGTGEFVVYQRN ASARLFVIRLSTSVAGYLPDERDLEIAEGTTQSVGVISLHQL >Mature_281_residues TEAVMLQPPDRSVSRLSFAMRLVDDFAPEREPPAGVAVTLTGGGTQGIRNPGGWHLFMDLPPGTYRVSARSELYLAEEKE IDTALLDPGLPVVELLLKPSAAYPFPPGTTLVRGVVRNEAGQDVPDARVEAVPWMPVPSVKGRVRQGGAQAGQPTIRLEH LSGGLAAGDMLLVRDGDPSRQEIVRIAAPLPSNASQPFTLAAPLRFGHAAGTSVHLLAAAAPFTTATAGTGEFVVYQRNA SARLFVIRLSTSVAGYLPDERDLEIAEGTTQSVGVISLHQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29869; Mature: 29738
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAVMLQPPDRSVSRLSFAMRLVDDFAPEREPPAGVAVTLTGGGTQGIRNPGGWHLFMD CCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEE LPPGTYRVSARSELYLAEEKEIDTALLDPGLPVVELLLKPSAAYPFPPGTTLVRGVVRNE CCCCCEEEECCCEEEEECCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCC AGQDVPDARVEAVPWMPVPSVKGRVRQGGAQAGQPTIRLEHLSGGLAAGDMLLVRDGDPS CCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCC RQEIVRIAAPLPSNASQPFTLAAPLRFGHAAGTSVHLLAAAAPFTTATAGTGEFVVYQRN HHHHEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEECCCCCEEEEEEEC ASARLFVIRLSTSVAGYLPDERDLEIAEGTTQSVGVISLHQL CCEEEEEEEEECCEECCCCCCCCEEEECCCCCCCEEEEEECC >Mature Secondary Structure TEAVMLQPPDRSVSRLSFAMRLVDDFAPEREPPAGVAVTLTGGGTQGIRNPGGWHLFMD CCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEE LPPGTYRVSARSELYLAEEKEIDTALLDPGLPVVELLLKPSAAYPFPPGTTLVRGVVRNE CCCCCEEEECCCEEEEECCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCC AGQDVPDARVEAVPWMPVPSVKGRVRQGGAQAGQPTIRLEHLSGGLAAGDMLLVRDGDPS CCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCC RQEIVRIAAPLPSNASQPFTLAAPLRFGHAAGTSVHLLAAAAPFTTATAGTGEFVVYQRN HHHHEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEECCCCCEEEEEEEC ASARLFVIRLSTSVAGYLPDERDLEIAEGTTQSVGVISLHQL CCEEEEEEEEECCEECCCCCCCCEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA