| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996062
Identifier: 39996062
GI number: 39996062
Start: 1033287
End: 1034075
Strand: Reverse
Name: 39996062
Synonym: GSU0959
Alternate gene names: NA
Gene position: 1034075-1033287 (Counterclockwise)
Preceding gene: 39996064
Following gene: 39996061
Centisome position: 27.11
GC content: 47.15
Gene sequence:
>789_bases GTGCAGGTAACAGACAAGGCATATACGGAGCATCGAGTATTTATCGAACTTGAGCGATACGCGGAGTTCTATGAGCAATT GGCCATGTCTGTGTTTTTGTTCACAACGATGGGTACAAAGTCCATCTGCAACATTGACACCTACGTCTACTCCTCAATGC AGGGTACCGTTGAATCGATCAAGACTATTCTTCTCGCGGGGCGCATCAATGACGCATACGCGCTGCTTCGGAAGTATTAC GATTCTGCGGTAATCAACGTCTATTCCAACCTGTACCTGCGGAACAACTTCAGCATCGAGAACTTTGTCGTCGAGAAAAT ACACAACTGGCTCCAGGGAAAGGAGAGCCTCCCAGAGTTCCGGGTGATGTCCCAATATGTTAGAACCTCAGAAGCGCTTA AGCCGATCAACGACCTGCTTTACGTCGATGACAGATACAAGCGCTTGCGCGCCAGATGCAATGACCATACACATTACAAC TTCTACCGAAACGTAATGCTCAACGACAACGAGATTTACATCGAGAATCGTGGCTGGTGGCTTGATAGATTTGCTGAAGA TGTGCGAGATATCTTCGTTCTTCATCTGGGCTACATCTTTTTCTTGAATGACCACTACATGATGTCCAGCGATTATATAG ATGCGCTTGATTGCAGCATGCAACCTGAAGAGGATTCCCAATACTGGGTCGCTTCTTTCATCCAAGAAATCTTCAACGAG GTCGTCACTCCGGGACGCCCAGACATCACAGCCACTATCAAAGCAAATTCTGCGATGCAGCTATCATGA
Upstream 100 bases:
>100_bases CGTCAAAGAAAACGACTCAAAATCGGTTGGGCACCATTTTGCCTATTGACTGACTGGGGCCTTATAAGAGTTGGGCCTTG ATACATAGAGGAGCATAGCC
Downstream 100 bases:
>100_bases ATAAGTTGAAAGAATAATGACGGAGACTGCGAGACGCTGGTAACTTATTTAACTTATTAACAAAAGCGATGCCCAACTAG CGCCACGACCGGCCTAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MQVTDKAYTEHRVFIELERYAEFYEQLAMSVFLFTTMGTKSICNIDTYVYSSMQGTVESIKTILLAGRINDAYALLRKYY DSAVINVYSNLYLRNNFSIENFVVEKIHNWLQGKESLPEFRVMSQYVRTSEALKPINDLLYVDDRYKRLRARCNDHTHYN FYRNVMLNDNEIYIENRGWWLDRFAEDVRDIFVLHLGYIFFLNDHYMMSSDYIDALDCSMQPEEDSQYWVASFIQEIFNE VVTPGRPDITATIKANSAMQLS
Sequences:
>Translated_262_residues MQVTDKAYTEHRVFIELERYAEFYEQLAMSVFLFTTMGTKSICNIDTYVYSSMQGTVESIKTILLAGRINDAYALLRKYY DSAVINVYSNLYLRNNFSIENFVVEKIHNWLQGKESLPEFRVMSQYVRTSEALKPINDLLYVDDRYKRLRARCNDHTHYN FYRNVMLNDNEIYIENRGWWLDRFAEDVRDIFVLHLGYIFFLNDHYMMSSDYIDALDCSMQPEEDSQYWVASFIQEIFNE VVTPGRPDITATIKANSAMQLS >Mature_262_residues MQVTDKAYTEHRVFIELERYAEFYEQLAMSVFLFTTMGTKSICNIDTYVYSSMQGTVESIKTILLAGRINDAYALLRKYY DSAVINVYSNLYLRNNFSIENFVVEKIHNWLQGKESLPEFRVMSQYVRTSEALKPINDLLYVDDRYKRLRARCNDHTHYN FYRNVMLNDNEIYIENRGWWLDRFAEDVRDIFVLHLGYIFFLNDHYMMSSDYIDALDCSMQPEEDSQYWVASFIQEIFNE VVTPGRPDITATIKANSAMQLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31044; Mature: 31044
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVTDKAYTEHRVFIELERYAEFYEQLAMSVFLFTTMGTKSICNIDTYVYSSMQGTVESI CCCCCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH KTILLAGRINDAYALLRKYYDSAVINVYSNLYLRNNFSIENFVVEKIHNWLQGKESLPEF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCHHCCHHH RVMSQYVRTSEALKPINDLLYVDDRYKRLRARCNDHTHYNFYRNVMLNDNEIYIENRGWW HHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEECCCCC LDRFAEDVRDIFVLHLGYIFFLNDHYMMSSDYIDALDCSMQPEEDSQYWVASFIQEIFNE HHHHHHHHHHHHHHHHHHHHEECCCEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHH VVTPGRPDITATIKANSAMQLS HCCCCCCCEEEEEECCCCEECC >Mature Secondary Structure MQVTDKAYTEHRVFIELERYAEFYEQLAMSVFLFTTMGTKSICNIDTYVYSSMQGTVESI CCCCCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH KTILLAGRINDAYALLRKYYDSAVINVYSNLYLRNNFSIENFVVEKIHNWLQGKESLPEF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCHHCCHHH RVMSQYVRTSEALKPINDLLYVDDRYKRLRARCNDHTHYNFYRNVMLNDNEIYIENRGWW HHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEECCCCC LDRFAEDVRDIFVLHLGYIFFLNDHYMMSSDYIDALDCSMQPEEDSQYWVASFIQEIFNE HHHHHHHHHHHHHHHHHHHHEECCCEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHH VVTPGRPDITATIKANSAMQLS HCCCCCCCEEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA