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The map label for this gene is trg [C]

Identifier: 39996038

GI number: 39996038

Start: 1004344

End: 1005930

Strand: Reverse

Name: trg [C]

Synonym: GSU0935

Alternate gene names: 39996038

Gene position: 1005930-1004344 (Counterclockwise)

Preceding gene: 39996050

Following gene: 39996036

Centisome position: 26.37

GC content: 64.21

Gene sequence:

>1587_bases
ATGTTGGGTAAAAAGCTGGCATTCAAAGTTCTGGCGATTCTCGGGATATGCCTTTCGCTTGGCCTCTTCACGCTGGGGTC
GGTGGCGGGATGGCTCCAGTTCAGATCATCCCTCGATCTTCAGCTCAAGAATGCCCGTAATCTGGCCGGGCTCATCATTC
ACGACATTGACGGCTATATGATGAAGGGCGACTCCTCGGAAGTGGACCGCTTCATCTCCGCGGTCAAGAGCAAGAATTTC
ATCATGGACCTCAGGGTTTTCGACGAGCAGGCCAAAGAGGTGTCGCCAACCCCCTCCCAGACCCCCAACGCCAAGATCCA
GCAGGCCATTGCCGCCGGCCGCACCCTTGAATTCAAGGAGACCCTGGACGGCAAGCGCACCCTGAGCCTGGTCCTTCCCT
TCCCCAACGAGCAGCGCTGCCAGAGTTGCCACGACGCTGGCGCCGCCTACCTGGGCGGACTCCTGGTCACCACCTCCATC
GAAGAAGGCTATGAGGGCGCCCGCCACCTGCTCATCATGCTGGCCGTGGTGGGAACAGTTTTCTTCCTGGTGCTCCTGGC
CTGCATGTACTTCTTCTTCAGCAAGACGATCATCGCACCCATTGCCGATGTCTCGCGCCAGGTGGACGAACTTGCCAGCG
GCGGCGGCGACCTGACCAGAGTCCTGCCGGTGCGGACCCAGGACGAGATCGGCAACCTGGCCGGCGGCATCAACCGGCTC
ACGTCGACCATCCAGGGCATCATCACCCGCATCGCCCAGAACGCCGCGCAACTGGCATCGGCGGCAAGCCAGCTCAACGT
TACGTCGGCGGACATGGCCCGGAGCATGGAAGCGGTAGCCGGCCAGGCCACGACCGTTGCTACGGCCAGCGAGCAGATGG
CCTCCACCTCCCAGGAGATCGCGGGAAGCTGTTCAATCGCCGCCGACGGCGCCATGCAGGCTACCGAAACGGCCCGGGAC
GGAGCGGAGGTGGTGGAACGGACCATCGCCGTCATGGCGAGCATCGCCGACCGGGTGAAGGACACGGCCCGGACCGTGGA
AAGCCTCGGCAGCAGGAGCGACCAGATCGGCGAGATCATCGGCACTATCGAGGACATTGCCGACCAGACCAATCTGCTGG
CCCTCAACGCCGCCATCGAGGCAGCCCGGGCCGGTGAGCAGGGGCGCGGCTTCGCCGTGGTGGCCGACGAGGTCAGGGCC
CTGGCCGAACGCACCACCCGGGCCACGAAAGAGATCGGCTCCATGATCAAGAGCATCCAGCAGGAGACCCGCGGTGCGGT
CACTTCCATGGAAGAGGGAGTTCACGAGGTCACCCGCGGCACCGACGAGGCCTCGCGCTCGGGCGAATCGCTCCAGGCGA
TCCTCCAGCGCGTCTCCGACGTGACTGGGCAGGTGAACCAGATCGCCACTGCCGCCGAGGAGCAGAACGCCACCACCGGC
GAGATCACCAGGAACATCCAGGACATCACCGATACGGTCCAGAGTACGGCCCGCGGTGCGCAGGACTCCGCTCAGGCGGC
CGGCCAGCTGGCCAGCCTGGCGCGTGAGCTGCAGGAACTGGTGGGTAAATTCAAGATCGGTGCCTGA

Upstream 100 bases:

>100_bases
TGTTTATTTTTTTACTAAACATTTTCTTACGACAGCCGATAAATTCTATAGCTCTCAAGCGACAATTTATTCATCATTTG
TTTACAGTGGGAGGTTTTAA

Downstream 100 bases:

>100_bases
GGCATCCCCCCGGCGGCTGCGTGCAGCCAGCCGCCGGGGGAACGTCGCGCTAGGGATCAGTCGGAAAAATCGGCCAGGGT
GCGGAGGGTTTCGGCCAATT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MLGKKLAFKVLAILGICLSLGLFTLGSVAGWLQFRSSLDLQLKNARNLAGLIIHDIDGYMMKGDSSEVDRFISAVKSKNF
IMDLRVFDEQAKEVSPTPSQTPNAKIQQAIAAGRTLEFKETLDGKRTLSLVLPFPNEQRCQSCHDAGAAYLGGLLVTTSI
EEGYEGARHLLIMLAVVGTVFFLVLLACMYFFFSKTIIAPIADVSRQVDELASGGGDLTRVLPVRTQDEIGNLAGGINRL
TSTIQGIITRIAQNAAQLASAASQLNVTSADMARSMEAVAGQATTVATASEQMASTSQEIAGSCSIAADGAMQATETARD
GAEVVERTIAVMASIADRVKDTARTVESLGSRSDQIGEIIGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRA
LAERTTRATKEIGSMIKSIQQETRGAVTSMEEGVHEVTRGTDEASRSGESLQAILQRVSDVTGQVNQIATAAEEQNATTG
EITRNIQDITDTVQSTARGAQDSAQAAGQLASLARELQELVGKFKIGA

Sequences:

>Translated_528_residues
MLGKKLAFKVLAILGICLSLGLFTLGSVAGWLQFRSSLDLQLKNARNLAGLIIHDIDGYMMKGDSSEVDRFISAVKSKNF
IMDLRVFDEQAKEVSPTPSQTPNAKIQQAIAAGRTLEFKETLDGKRTLSLVLPFPNEQRCQSCHDAGAAYLGGLLVTTSI
EEGYEGARHLLIMLAVVGTVFFLVLLACMYFFFSKTIIAPIADVSRQVDELASGGGDLTRVLPVRTQDEIGNLAGGINRL
TSTIQGIITRIAQNAAQLASAASQLNVTSADMARSMEAVAGQATTVATASEQMASTSQEIAGSCSIAADGAMQATETARD
GAEVVERTIAVMASIADRVKDTARTVESLGSRSDQIGEIIGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRA
LAERTTRATKEIGSMIKSIQQETRGAVTSMEEGVHEVTRGTDEASRSGESLQAILQRVSDVTGQVNQIATAAEEQNATTG
EITRNIQDITDTVQSTARGAQDSAQAAGQLASLARELQELVGKFKIGA
>Mature_528_residues
MLGKKLAFKVLAILGICLSLGLFTLGSVAGWLQFRSSLDLQLKNARNLAGLIIHDIDGYMMKGDSSEVDRFISAVKSKNF
IMDLRVFDEQAKEVSPTPSQTPNAKIQQAIAAGRTLEFKETLDGKRTLSLVLPFPNEQRCQSCHDAGAAYLGGLLVTTSI
EEGYEGARHLLIMLAVVGTVFFLVLLACMYFFFSKTIIAPIADVSRQVDELASGGGDLTRVLPVRTQDEIGNLAGGINRL
TSTIQGIITRIAQNAAQLASAASQLNVTSADMARSMEAVAGQATTVATASEQMASTSQEIAGSCSIAADGAMQATETARD
GAEVVERTIAVMASIADRVKDTARTVESLGSRSDQIGEIIGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRA
LAERTTRATKEIGSMIKSIQQETRGAVTSMEEGVHEVTRGTDEASRSGESLQAILQRVSDVTGQVNQIATAAEEQNATTG
EITRNIQDITDTVQSTARGAQDSAQAAGQLASLARELQELVGKFKIGA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=354, Percent_Identity=29.9435028248588, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI2367378, Length=315, Percent_Identity=32.0634920634921, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1788195, Length=287, Percent_Identity=31.7073170731707, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1788194, Length=366, Percent_Identity=28.4153005464481, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1789453, Length=366, Percent_Identity=27.5956284153005, Blast_Score=115, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 55875; Mature: 55875

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKKLAFKVLAILGICLSLGLFTLGSVAGWLQFRSSLDLQLKNARNLAGLIIHDIDGYM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHEEECCCCE
MKGDSSEVDRFISAVKSKNFIMDLRVFDEQAKEVSPTPSQTPNAKIQQAIAAGRTLEFKE
ECCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEHHH
TLDGKRTLSLVLPFPNEQRCQSCHDAGAAYLGGLLVTTSIEEGYEGARHLLIMLAVVGTV
HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
FFLVLLACMYFFFSKTIIAPIADVSRQVDELASGGGDLTRVLPVRTQDEIGNLAGGINRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
TSTIQGIITRIAQNAAQLASAASQLNVTSADMARSMEAVAGQATTVATASEQMASTSQEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AGSCSIAADGAMQATETARDGAEVVERTIAVMASIADRVKDTARTVESLGSRSDQIGEII
CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTRATKEIGSMIKSIQ
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
QETRGAVTSMEEGVHEVTRGTDEASRSGESLQAILQRVSDVTGQVNQIATAAEEQNATTG
HHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EITRNIQDITDTVQSTARGAQDSAQAAGQLASLARELQELVGKFKIGA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLGKKLAFKVLAILGICLSLGLFTLGSVAGWLQFRSSLDLQLKNARNLAGLIIHDIDGYM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHEEECCCCE
MKGDSSEVDRFISAVKSKNFIMDLRVFDEQAKEVSPTPSQTPNAKIQQAIAAGRTLEFKE
ECCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEHHH
TLDGKRTLSLVLPFPNEQRCQSCHDAGAAYLGGLLVTTSIEEGYEGARHLLIMLAVVGTV
HCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
FFLVLLACMYFFFSKTIIAPIADVSRQVDELASGGGDLTRVLPVRTQDEIGNLAGGINRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
TSTIQGIITRIAQNAAQLASAASQLNVTSADMARSMEAVAGQATTVATASEQMASTSQEI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AGSCSIAADGAMQATETARDGAEVVERTIAVMASIADRVKDTARTVESLGSRSDQIGEII
CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTRATKEIGSMIKSIQ
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
QETRGAVTSMEEGVHEVTRGTDEASRSGESLQAILQRVSDVTGQVNQIATAAEEQNATTG
HHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EITRNIQDITDTVQSTARGAQDSAQAAGQLASLARELQELVGKFKIGA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA