| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is pspE [C]
Identifier: 39996033
GI number: 39996033
Start: 999205
End: 1000476
Strand: Direct
Name: pspE [C]
Synonym: GSU0930
Alternate gene names: 39996033
Gene position: 999205-1000476 (Clockwise)
Preceding gene: 39996032
Following gene: 39996037
Centisome position: 26.2
GC content: 61.48
Gene sequence:
>1272_bases ATGAAAACAAAGGGCTGGGGTGCGCTGGCAGTGCTCCCCCTGGCGCTCGCACTCGCCGGAAACGTGGCGGCGGAAGAGGT CAAGGGGAAGGTTAAAACCGTTTCGGTAAAGGCGGGGCAGATATCCCTCACAGTGGAGAGCAAAGGGGTGATGCTCTTCA GGGTGACCGACGGGACAACATTCGCCAATGCGGCATCGATCAGGGAGATTCACGCCGATGATCTCCTGCAGGTCGATTAT CGGGTTGACGGCTTCGACAACGTGGCAAAGGCCGTTGCCAAGGTCGTCGCCAAGCTGCCGGAAGGCGTCACCGCGATGGA CACCAGGGAACTGGAGGCCCTGGTGGCCAAGGGAACGGAGGAGGGGGGATATCTGCTGATCGACTCCCGTCCCGCCGGAA AGTACAATGAGGCCCATATCCCGACGGCCGTATCGATTCCCTTTGCCGAGCTCGAAAAGAACCCCGCGCTTCTGACGGCG TCGAAAGACCGGCTTCTGGTGTTCTACTGCGGTGGCGTCACCTGAGTACTCAGTCCCAAATCCGCCGGTCTGGCGAAAAA ATCGGGATACGAGAAGGTCCGCGTCTATCTGGACGGCGAACCGGAGTGGAAAAAGGCCGAACTGCCCCTGGAGTCGAGCC TGGCATTTGTTGAAAAGGGGAATATCGTTCTCATTGACCTGCGGTCCCCCGAGAAGGTGGCCGCGGGCCACATCCCCGGC GCCGTCGGCATCCCCGCCGCGGACCTCGCCGCCGCGCAGGCAAAATTTCCCGCCTACAGGGGAGCCCACCTGGTCTTCTA TTCGGACAGTGCCGAGGACCTCAGCCAGGCCCTTGAACTGGCACGGGACTGGAATTACAAGAACGCTACCATTTTCCCGG GCGGGATCGGTGCCTGGCAGAAGGCCGGCAAGCACCTGAAGACCGGTGCCGCGGCCGCAACTGTCACATATGTGAAAAAG CTTGCCCCGGGCGAGGTCGGCACAGAGGACTTTCAGGCGGCGCTAAAGGACGGCAGGACGGTCGTCATCGACGCCCGTGC CCCCGGCGAGTTCGAAAAGGGACATTTCAAGGGAGCGGTCAATATCCCGGCGGAGGAGGCAGCGAAGCGGCTGGCCGAGA TTCCCGCCGACCGGCCCGTACTCGTCCATTGCTCTACCGGCACCCGGGCAGAGATGGTCTACGACCTGGTGAAGGACAAA GGGTACAATCTCAAATACCTAAAGGCCGGCGTGGAGTTTGCCGCCGACGGAAGCTACACCATCAGCGAGTAG
Upstream 100 bases:
>100_bases ATTATTGATGTTTGCGTACCCGGTGTATTTCTGCTGTATTTTGGTACCTTGTTTGCATTTTGAGGAGCCATCACACTTTT CAAGGAGGCACGTTACGCCT
Downstream 100 bases:
>100_bases CGTCTGGCGGGACAGTGCCGGTTTCGGAGGAGCAGGGGGCACCGGAAGGGCGGGACACCGGCGGCATGCCGGTTGTCTGT CGGCCGTTCCGGTGCCCCTT
Product: sulfur transferase, selenocysteine-containing
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Beta-Lactamase Domain Protein; Rhodanese-Like Protein; Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Family Protein; Rhodanese-Like Domain-Containing Protein; Molybdopterin Biosynthesis Protein; Sulfur Transferase; Rhodanese-Like Sulfur Transferase; Sulfur Transferase Selenocysteine-Containing Protein; Sulfur Transferase Selenocysteine-Containing; Phage Shock Protein E; Copper Amine Oxidase Domain Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MKTKGWGALAVLPLALALAGNVAAEEVKGKVKTVSVKAGQISLTVESKGVMLFRVTDGTTFANAASIREIHADDLLQVDY RVDGFDNVAKAVAKVVAKLPEGVTAMDTRELEALVAKGTEEGGYLLIDSRPAGKYNEAHIPTAVSIPFAELEKNPALLTA SKDRLLVFYCGGVTUVLSPKSAGLAKKSGYEKVRVYLDGEPEWKKAELPLESSLAFVEKGNIVLIDLRSPEKVAAGHIPG AVGIPAADLAAAQAKFPAYRGAHLVFYSDSAEDLSQALELARDWNYKNATIFPGGIGAWQKAGKHLKTGAAAATVTYVKK LAPGEVGTEDFQAALKDGRTVVIDARAPGEFEKGHFKGAVNIPAEEAAKRLAEIPADRPVLVHCSTGTRAEMVYDLVKDK GYNLKYLKAGVEFAADGSYTISE
Sequences:
>Translated_423_residues MKTKGWGALAVLPLALALAGNVAAEEVKGKVKTVSVKAGQISLTVESKGVMLFRVTDGTTFANAASIREIHADDLLQVDY RVDGFDNVAKAVAKVVAKLPEGVTAMDTRELEALVAKGTEEGGYLLIDSRPAGKYNEAHIPTAVSIPFAELEKNPALLTA SKDRLLVFYCGGVT*VLSPKSAGLAKKSGYEKVRVYLDGEPEWKKAELPLESSLAFVEKGNIVLIDLRSPEKVAAGHIPG AVGIPAADLAAAQAKFPAYRGAHLVFYSDSAEDLSQALELARDWNYKNATIFPGGIGAWQKAGKHLKTGAAAATVTYVKK LAPGEVGTEDFQAALKDGRTVVIDARAPGEFEKGHFKGAVNIPAEEAAKRLAEIPADRPVLVHCSTGTRAEMVYDLVKDK GYNLKYLKAGVEFAADGSYTISE >Mature_423_residues MKTKGWGALAVLPLALALAGNVAAEEVKGKVKTVSVKAGQISLTVESKGVMLFRVTDGTTFANAASIREIHADDLLQVDY RVDGFDNVAKAVAKVVAKLPEGVTAMDTRELEALVAKGTEEGGYLLIDSRPAGKYNEAHIPTAVSIPFAELEKNPALLTA SKDRLLVFYCGGVT*VLSPKSAGLAKKSGYEKVRVYLDGEPEWKKAELPLESSLAFVEKGNIVLIDLRSPEKVAAGHIPG AVGIPAADLAAAQAKFPAYRGAHLVFYSDSAEDLSQALELARDWNYKNATIFPGGIGAWQKAGKHLKTGAAAATVTYVKK LAPGEVGTEDFQAALKDGRTVVIDARAPGEFEKGHFKGAVNIPAEEAAKRLAEIPADRPVLVHCSTGTRAEMVYDLVKDK GYNLKYLKAGVEFAADGSYTISE
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44778; Mature: 44778
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKGWGALAVLPLALALAGNVAAEEVKGKVKTVSVKAGQISLTVESKGVMLFRVTDGTT CCCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEEEEECCEEEEEEECCCEEEEEEECCCC FANAASIREIHADDLLQVDYRVDGFDNVAKAVAKVVAKLPEGVTAMDTRELEALVAKGTE CCCHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCC EGGYLLIDSRPAGKYNEAHIPTAVSIPFAELEKNPALLTASKDRLLVFYCGGVTVLSPKS CCCEEEEECCCCCCCCCCCCCEEEECCHHHHCCCCEEEEECCCCEEEEEECCEEEECCCC AGLAKKSGYEKVRVYLDGEPEWKKAELPLESSLAFVEKGNIVLIDLRSPEKVAAGHIPGA CCCHHHCCCEEEEEEECCCCCCCCCCCCHHHCEEEEECCCEEEEECCCCCHHHCCCCCCC VGIPAADLAAAQAKFPAYRGAHLVFYSDSAEDLSQALELARDWNYKNATIFPGGIGAWQK CCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCCCHHHH AGKHLKTGAAAATVTYVKKLAPGEVGTEDFQAALKDGRTVVIDARAPGEFEKGHFKGAVN CCCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEE IPAEEAAKRLAEIPADRPVLVHCSTGTRAEMVYDLVKDKGYNLKYLKAGVEFAADGSYTI CCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCEEECCCCEEE SE CC >Mature Secondary Structure MKTKGWGALAVLPLALALAGNVAAEEVKGKVKTVSVKAGQISLTVESKGVMLFRVTDGTT CCCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEEEEECCEEEEEEECCCEEEEEEECCCC FANAASIREIHADDLLQVDYRVDGFDNVAKAVAKVVAKLPEGVTAMDTRELEALVAKGTE CCCHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCC EGGYLLIDSRPAGKYNEAHIPTAVSIPFAELEKNPALLTASKDRLLVFYCGGVTVLSPKS CCCEEEEECCCCCCCCCCCCCEEEECCHHHHCCCCEEEEECCCCEEEEEECCEEEECCCC AGLAKKSGYEKVRVYLDGEPEWKKAELPLESSLAFVEKGNIVLIDLRSPEKVAAGHIPGA CCCHHHCCCEEEEEEECCCCCCCCCCCCHHHCEEEEECCCEEEEECCCCCHHHCCCCCCC VGIPAADLAAAQAKFPAYRGAHLVFYSDSAEDLSQALELARDWNYKNATIFPGGIGAWQK CCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCCCHHHH AGKHLKTGAAAATVTYVKKLAPGEVGTEDFQAALKDGRTVVIDARAPGEFEKGHFKGAVN CCCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEE IPAEEAAKRLAEIPADRPVLVHCSTGTRAEMVYDLVKDKGYNLKYLKAGVEFAADGSYTI CCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCEEECCCCEEE SE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA