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The map label for this gene is ydiF [H]

Identifier: 39996025

GI number: 39996025

Start: 988816

End: 990753

Strand: Direct

Name: ydiF [H]

Synonym: GSU0922

Alternate gene names: 39996025

Gene position: 988816-990753 (Clockwise)

Preceding gene: 39996023

Following gene: 308513292

Centisome position: 25.93

GC content: 65.84

Gene sequence:

>1938_bases
ATGCTCCATCTGAGAAAACTGTCAAAGGATTTCGCCGGCACCTCCCTGTTCGCGGAGATCGACTGGCATCTGAAAAAGGG
GGAACGGGTCGGCCTCGTGGGCGAGAACGGGGCCGGGAAGTCGACCCTGATGCGCATCGTTGCCGGGCTCGTGGAACAGA
CATCGGGCGAGCTCATCTTCGCCCGGGGCGCCACGGTGGGCTACCTTCCCCAGGACGGGATCGTGACCCGCGGCCGAGGG
CTCCTGGCGGAGGCCATGACCGCTCTGGAAGACCTTCAGTCCCTGGAACGGGAGCTGCACGAACTGACGTCGCGGCTGGA
GAATATCTCTCACGATGCGCCGGAGCACGGCGAGTGTCTCGAACGCTACGGCCGGCTCCAGGAGGAGTTCCGGCTGCGGG
GCGGATACTCCATGGAGGCGGAGGCCTGCCGGGTCCTGGACGGGCTCGGCTTCACCACCGGCGACCGGCAGCGCGACTGC
GGCGAGTTTTCCGGCGGCTGGCAGATGCGGATCGCCCTGGCCAAGCTCCTGCTGAAAAAGCCCAACGTGCTGCTGCTGGA
CGAGCCGACCAACCACCTGGACATCGAGGCCCGCAACTGGCTTGAGGGGTATCTCCAGGAGTATCCCCATTCGGTCATCC
TCGTCTCCCACGACCGCTTCTTCATGGACCAGGTCTGCCACCGGATCACGGAGGTCTGGAACGGCACCCTTACCGACTAT
CATTGCTCGTACAGCCGCTACCTGACGGCCCGGGAGGAGCGGGTGGCGGCCCTGCTCGAGGCGAAGCGGCGCCAGGACGA
GGAAGTCGCCAAGATCGAGGACTTCATCAACCGCTTCCGCTACAAGGCTGACAAGGCGGCCCTGGTCCAATCGCGGGTCA
AACAGCTGGAAAAGATCGAGCGGATCGTGTTGCCGCCTGAGCGCAAGAAGATCCGCTTCCGCTTCCCCGATCCCCCCAAG
AGCGGCAGGATCGTGCTGGAGCTGAAGGGGGTGACCAAAGCCTACGGCAGTCACGTGGTCCTGGACGGGATCGATCTGAC
GGTGGAGAAGGGAGAGCGGATCGCCCTGGTGGGGCACAACGGCGCCGGCAAGTCGACCCTCATGGGGGTGCTGGCCGGCA
AGCCGTTCCAGGGAGGGGAGCGGATCGCCGGCCACAACGTGGTTGCCGACTACTTCGCCCAGGACCAGGCCCAGGTGCTG
GACGGCGCGAAAACGGCCCACGAGGAACTGCTGGCCGACGCACCCTTCGACATGGTGCCCCAGCTGCGGGACATCCTCGG
CGCCTTCCTCTTCACCGGCGACGACATCCACAAGCGGGTAGAGGTCCTCTCGGGCGGCGAGCGGAACCGGCTGGCACTGG
CCAAGATGCTGTTGCGGCCCTCGAACTTGCTGCTGATGGACGAGCCAACCAACCACCTGGACCTCTTCAGCAAGGAGGTG
CTGCTGGACGCCCTCAAGACCTTTGCCGGCACCGTGGTCTTCGTCTCCCACGACCGGCACTTCATCGACGGCCTGGCCAC
CCGGGTCGTGGAGGTGGAGGGAGGTCGGCTTACCAGCTATCACGGCGACTACGAGTATTACCTGCGGAAAAAAGCAGCGG
ACGATTGCCCGGCCCCACAGGCCGCCGCTGGCCGGTCCCAGGTGCCTGACGCATCGGCCGGGTCGCCGACCGCGGAATCC
AAGGAGGAGCGGCAGCGCCAGCGGGAGGAGGAAAAGGCCCGCCAGCGGGACGAAAAGCGCCGCCTGAAGCGCCTCGAAGA
GCTGGAATCCGCCATTGCCGCCGAAGAAGGGCTCCTGGCCGACCTGGAGGCGCGCATGGCTGATCCGGCCTTTTTCGATG
ACCACGAGCAGGCCCGGCGGGGGGGCGAAGAACATGCCGGACTCACCGCTCGCATTGCCTCCCTGTACGAAGAATGGGAG
AGCGTCGCCGCAGGCTGA

Upstream 100 bases:

>100_bases
GGCCCCTGGTGCGCCCGCCTGCCGGAGCAATTGACAAAATCGCGGGGCACCCCCTAGTATAGCCCTGTAGCGCTAACGGA
ACGCGGTTCGGGATACCTTC

Downstream 100 bases:

>100_bases
GGAGTGGGTGTTCCTATCCCCGCGACCTTGTTGCATTCACGCGCCATTCATTGACAGGCGCGGCTTCAGAGGCTACTCTT
TCTGTACTCTGCCGCCACCG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MLHLRKLSKDFAGTSLFAEIDWHLKKGERVGLVGENGAGKSTLMRIVAGLVEQTSGELIFARGATVGYLPQDGIVTRGRG
LLAEAMTALEDLQSLERELHELTSRLENISHDAPEHGECLERYGRLQEEFRLRGGYSMEAEACRVLDGLGFTTGDRQRDC
GEFSGGWQMRIALAKLLLKKPNVLLLDEPTNHLDIEARNWLEGYLQEYPHSVILVSHDRFFMDQVCHRITEVWNGTLTDY
HCSYSRYLTAREERVAALLEAKRRQDEEVAKIEDFINRFRYKADKAALVQSRVKQLEKIERIVLPPERKKIRFRFPDPPK
SGRIVLELKGVTKAYGSHVVLDGIDLTVEKGERIALVGHNGAGKSTLMGVLAGKPFQGGERIAGHNVVADYFAQDQAQVL
DGAKTAHEELLADAPFDMVPQLRDILGAFLFTGDDIHKRVEVLSGGERNRLALAKMLLRPSNLLLMDEPTNHLDLFSKEV
LLDALKTFAGTVVFVSHDRHFIDGLATRVVEVEGGRLTSYHGDYEYYLRKKAADDCPAPQAAAGRSQVPDASAGSPTAES
KEERQRQREEEKARQRDEKRRLKRLEELESAIAAEEGLLADLEARMADPAFFDDHEQARRGGEEHAGLTARIASLYEEWE
SVAAG

Sequences:

>Translated_645_residues
MLHLRKLSKDFAGTSLFAEIDWHLKKGERVGLVGENGAGKSTLMRIVAGLVEQTSGELIFARGATVGYLPQDGIVTRGRG
LLAEAMTALEDLQSLERELHELTSRLENISHDAPEHGECLERYGRLQEEFRLRGGYSMEAEACRVLDGLGFTTGDRQRDC
GEFSGGWQMRIALAKLLLKKPNVLLLDEPTNHLDIEARNWLEGYLQEYPHSVILVSHDRFFMDQVCHRITEVWNGTLTDY
HCSYSRYLTAREERVAALLEAKRRQDEEVAKIEDFINRFRYKADKAALVQSRVKQLEKIERIVLPPERKKIRFRFPDPPK
SGRIVLELKGVTKAYGSHVVLDGIDLTVEKGERIALVGHNGAGKSTLMGVLAGKPFQGGERIAGHNVVADYFAQDQAQVL
DGAKTAHEELLADAPFDMVPQLRDILGAFLFTGDDIHKRVEVLSGGERNRLALAKMLLRPSNLLLMDEPTNHLDLFSKEV
LLDALKTFAGTVVFVSHDRHFIDGLATRVVEVEGGRLTSYHGDYEYYLRKKAADDCPAPQAAAGRSQVPDASAGSPTAES
KEERQRQREEEKARQRDEKRRLKRLEELESAIAAEEGLLADLEARMADPAFFDDHEQARRGGEEHAGLTARIASLYEEWE
SVAAG
>Mature_645_residues
MLHLRKLSKDFAGTSLFAEIDWHLKKGERVGLVGENGAGKSTLMRIVAGLVEQTSGELIFARGATVGYLPQDGIVTRGRG
LLAEAMTALEDLQSLERELHELTSRLENISHDAPEHGECLERYGRLQEEFRLRGGYSMEAEACRVLDGLGFTTGDRQRDC
GEFSGGWQMRIALAKLLLKKPNVLLLDEPTNHLDIEARNWLEGYLQEYPHSVILVSHDRFFMDQVCHRITEVWNGTLTDY
HCSYSRYLTAREERVAALLEAKRRQDEEVAKIEDFINRFRYKADKAALVQSRVKQLEKIERIVLPPERKKIRFRFPDPPK
SGRIVLELKGVTKAYGSHVVLDGIDLTVEKGERIALVGHNGAGKSTLMGVLAGKPFQGGERIAGHNVVADYFAQDQAQVL
DGAKTAHEELLADAPFDMVPQLRDILGAFLFTGDDIHKRVEVLSGGERNRLALAKMLLRPSNLLLMDEPTNHLDLFSKEV
LLDALKTFAGTVVFVSHDRHFIDGLATRVVEVEGGRLTSYHGDYEYYLRKKAADDCPAPQAAAGRSQVPDASAGSPTAES
KEERQRQREEEKARQRDEKRRLKRLEELESAIAAEEGLLADLEARMADPAFFDDHEQARRGGEEHAGLTARIASLYEEWE
SVAAG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=528, Percent_Identity=34.6590909090909, Blast_Score=273, Evalue=3e-73,
Organism=Homo sapiens, GI10947137, Length=551, Percent_Identity=31.5789473684211, Blast_Score=237, Evalue=3e-62,
Organism=Homo sapiens, GI27881506, Length=551, Percent_Identity=31.5789473684211, Blast_Score=236, Evalue=5e-62,
Organism=Homo sapiens, GI10947135, Length=547, Percent_Identity=31.9926873857404, Blast_Score=199, Evalue=8e-51,
Organism=Homo sapiens, GI69354671, Length=547, Percent_Identity=31.9926873857404, Blast_Score=199, Evalue=8e-51,
Organism=Homo sapiens, GI27881501, Length=218, Percent_Identity=32.5688073394495, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI30795238, Length=218, Percent_Identity=32.5688073394495, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI31657092, Length=210, Percent_Identity=30.4761904761905, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI1789751, Length=597, Percent_Identity=34.0033500837521, Blast_Score=323, Evalue=3e-89,
Organism=Escherichia coli, GI1787041, Length=538, Percent_Identity=34.7583643122677, Blast_Score=314, Evalue=1e-86,
Organism=Escherichia coli, GI1787182, Length=652, Percent_Identity=32.361963190184, Blast_Score=253, Evalue=3e-68,
Organism=Escherichia coli, GI2367384, Length=536, Percent_Identity=31.3432835820896, Blast_Score=246, Evalue=3e-66,
Organism=Escherichia coli, GI1788506, Length=543, Percent_Identity=23.2044198895028, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI87081782, Length=557, Percent_Identity=24.5960502692998, Blast_Score=96, Evalue=1e-20,
Organism=Escherichia coli, GI1790190, Length=551, Percent_Identity=22.6860254083485, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI48994943, Length=526, Percent_Identity=23.1939163498099, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI145693107, Length=621, Percent_Identity=23.3494363929147, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081709, Length=192, Percent_Identity=31.25, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI87081791, Length=221, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1790467, Length=219, Percent_Identity=27.3972602739726, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1789891, Length=229, Percent_Identity=27.9475982532751, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI48994883, Length=263, Percent_Identity=26.9961977186312, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788225, Length=265, Percent_Identity=26.4150943396226, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1787164, Length=200, Percent_Identity=29.5, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1786319, Length=242, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1787105, Length=220, Percent_Identity=32.2727272727273, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787792, Length=204, Percent_Identity=30.8823529411765, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1790544, Length=239, Percent_Identity=25.1046025104602, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788897, Length=231, Percent_Identity=24.2424242424242, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789593, Length=255, Percent_Identity=26.2745098039216, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1788540, Length=251, Percent_Identity=29.0836653386454, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=520, Percent_Identity=34.0384615384615, Blast_Score=260, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI17555318, Length=547, Percent_Identity=30.5301645338208, Blast_Score=228, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17559834, Length=537, Percent_Identity=30.3538175046555, Blast_Score=219, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6321121, Length=552, Percent_Identity=32.0652173913043, Blast_Score=256, Evalue=6e-69,
Organism=Saccharomyces cerevisiae, GI6320874, Length=544, Percent_Identity=32.7205882352941, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6325030, Length=405, Percent_Identity=28.3950617283951, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6323278, Length=215, Percent_Identity=32.5581395348837, Blast_Score=110, Evalue=9e-25,
Organism=Saccharomyces cerevisiae, GI6324314, Length=216, Percent_Identity=31.9444444444444, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24666836, Length=500, Percent_Identity=34.8, Blast_Score=257, Evalue=2e-68,
Organism=Drosophila melanogaster, GI24642252, Length=559, Percent_Identity=30.5903398926655, Blast_Score=232, Evalue=7e-61,
Organism=Drosophila melanogaster, GI18859989, Length=559, Percent_Identity=30.5903398926655, Blast_Score=232, Evalue=7e-61,
Organism=Drosophila melanogaster, GI24641342, Length=542, Percent_Identity=30.9963099630996, Blast_Score=229, Evalue=6e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72242; Mature: 72242

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLRKLSKDFAGTSLFAEIDWHLKKGERVGLVGENGAGKSTLMRIVAGLVEQTSGELIF
CCCHHHHHHHHCCCEEEEEEEHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
ARGATVGYLPQDGIVTRGRGLLAEAMTALEDLQSLERELHELTSRLENISHDAPEHGECL
ECCCEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ERYGRLQEEFRLRGGYSMEAEACRVLDGLGFTTGDRQRDCGEFSGGWQMRIALAKLLLKK
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PNVLLLDEPTNHLDIEARNWLEGYLQEYPHSVILVSHDRFFMDQVCHRITEVWNGTLTDY
CCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCE
HCSYSRYLTAREERVAALLEAKRRQDEEVAKIEDFINRFRYKADKAALVQSRVKQLEKIE
ECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIVLPPERKKIRFRFPDPPKSGRIVLELKGVTKAYGSHVVLDGIDLTVEKGERIALVGHN
HHCCCCCCCEEEEECCCCCCCCEEEEEECCHHHHCCCEEEEECCEEEEECCCEEEEEECC
GAGKSTLMGVLAGKPFQGGERIAGHNVVADYFAQDQAQVLDGAKTAHEELLADAPFDMVP
CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QLRDILGAFLFTGDDIHKRVEVLSGGERNRLALAKMLLRPSNLLLMDEPTNHLDLFSKEV
HHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
LLDALKTFAGTVVFVSHDRHFIDGLATRVVEVEGGRLTSYHGDYEYYLRKKAADDCPAPQ
HHHHHHHHCCEEEEEECCHHHHHHHHHHEEEECCCEEEEECCCHHHHHHHHCCCCCCCCC
AAAGRSQVPDASAGSPTAESKEERQRQREEEKARQRDEKRRLKRLEELESAIAAEEGLLA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
DLEARMADPAFFDDHEQARRGGEEHAGLTARIASLYEEWESVAAG
HHHHHHCCCCCCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHLRKLSKDFAGTSLFAEIDWHLKKGERVGLVGENGAGKSTLMRIVAGLVEQTSGELIF
CCCHHHHHHHHCCCEEEEEEEHEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
ARGATVGYLPQDGIVTRGRGLLAEAMTALEDLQSLERELHELTSRLENISHDAPEHGECL
ECCCEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ERYGRLQEEFRLRGGYSMEAEACRVLDGLGFTTGDRQRDCGEFSGGWQMRIALAKLLLKK
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PNVLLLDEPTNHLDIEARNWLEGYLQEYPHSVILVSHDRFFMDQVCHRITEVWNGTLTDY
CCEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCE
HCSYSRYLTAREERVAALLEAKRRQDEEVAKIEDFINRFRYKADKAALVQSRVKQLEKIE
ECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIVLPPERKKIRFRFPDPPKSGRIVLELKGVTKAYGSHVVLDGIDLTVEKGERIALVGHN
HHCCCCCCCEEEEECCCCCCCCEEEEEECCHHHHCCCEEEEECCEEEEECCCEEEEEECC
GAGKSTLMGVLAGKPFQGGERIAGHNVVADYFAQDQAQVLDGAKTAHEELLADAPFDMVP
CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QLRDILGAFLFTGDDIHKRVEVLSGGERNRLALAKMLLRPSNLLLMDEPTNHLDLFSKEV
HHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
LLDALKTFAGTVVFVSHDRHFIDGLATRVVEVEGGRLTSYHGDYEYYLRKKAADDCPAPQ
HHHHHHHHCCEEEEEECCHHHHHHHHHHEEEECCCEEEEECCCHHHHHHHHCCCCCCCCC
AAAGRSQVPDASAGSPTAESKEERQRQREEEKARQRDEKRRLKRLEELESAIAAEEGLLA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
DLEARMADPAFFDDHEQARRGGEEHAGLTARIASLYEEWESVAAG
HHHHHHCCCCCCCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]