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The map label for this gene is 39995988

Identifier: 39995988

GI number: 39995988

Start: 941403

End: 942275

Strand: Reverse

Name: 39995988

Synonym: GSU0882

Alternate gene names: NA

Gene position: 942275-941403 (Counterclockwise)

Preceding gene: 39995989

Following gene: 39995987

Centisome position: 24.7

GC content: 71.36

Gene sequence:

>873_bases
ATGACGGCACGTATCTTCCACATACTCGCCTTGCTGCTCCTCTGGGGCTTCCCGGCTTTCGCCGCGGAGGTCGTGGTGGT
GCAGGGCGAGCGGAACATCCCCTACGAGGCGGCAGTGCGCGGCTTCGAGGGGACGGCCGGGGTACGTACCGTGGAGCGGC
TGGTCCTCTCGGAGCTGCGGGGCGCCGACGTGGTGCGGACCGTGCGCGAGGCGCGCCCCCGCCTGGTGCTGGCCGTGGGC
CGCGAGGCCCTGATCCGGGTGAGGGAGATCCGCGAGATTCCGGTGGTGTACGTGATGGTGGCCTCCCCCGAGTCGACCGG
CGCCCTGGGCCGCAACGTGACCGGGGTGACCATGACGGTGGCGCCCGAGCGCTACCTTACCTTCATCCGCGACAGTATCG
GCGGCCGGCGGGTGGGAATCCTCTACGACCCGGAGCGCACCGGCGTCATGGCGCGGCAGGCCCGCGCGGCGGCCGAGCGC
CTGGGCATCACCCTGGTTGAAGGGGTGGTCCGCTCGCCCCGGGACGTGCCGCGCACCCTGTCGGAGCTGGCGGGCAAGAC
CGATGTGCTCTGGCTCTTCCCCGACGCCACGGTACTCACCCGGGAGGGGCAGGAGGCGATCTTCCTCTTCTCCCAGAACA
GCCGGGTACCGGTGGTGGCCTTTGCCGAGAAGTACCTGGGCACGGGCGCCCTGGCGGCGCTGGCCATCGATCCGGTCGAC
CTGGGCCGCCAGGCGGGCAGGATGGCCCGTCGTATCATGGACGGCGTGGGCGTCGAGAGCGTACCGGCCGAAGGCCCGGC
ACGGCCGACCCTCAAGCTGAACGGCTCGGTGGCGCGCCACCTGGGAATCGACCCGGCACGACTCGGAGAGTAA

Upstream 100 bases:

>100_bases
TCAACGGTGCCCAGTATCACGACGAGATATTCAAAAACCCCGGCCGCTGGTTCGAAGGCGGCCTGCGCATCAAGTGGTAA
AGAAAACGATTTAGGAACCC

Downstream 100 bases:

>100_bases
CCAATGGGTGCGAACGCTCCTCCAGTGCGTTCTTTTTTTGCCGTTCTCCGCACGAGCTTCCGGGCGAAGCTCTTTACGGT
GATCTGTCTCTCGATCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter; ABC-Type Transporter Periplasmic Component; Lipoprotein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease; ABC-Type Transport System Periplasmic Component; Exported Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTARIFHILALLLLWGFPAFAAEVVVVQGERNIPYEAAVRGFEGTAGVRTVERLVLSELRGADVVRTVREARPRLVLAVG
REALIRVREIREIPVVYVMVASPESTGALGRNVTGVTMTVAPERYLTFIRDSIGGRRVGILYDPERTGVMARQARAAAER
LGITLVEGVVRSPRDVPRTLSELAGKTDVLWLFPDATVLTREGQEAIFLFSQNSRVPVVAFAEKYLGTGALAALAIDPVD
LGRQAGRMARRIMDGVGVESVPAEGPARPTLKLNGSVARHLGIDPARLGE

Sequences:

>Translated_290_residues
MTARIFHILALLLLWGFPAFAAEVVVVQGERNIPYEAAVRGFEGTAGVRTVERLVLSELRGADVVRTVREARPRLVLAVG
REALIRVREIREIPVVYVMVASPESTGALGRNVTGVTMTVAPERYLTFIRDSIGGRRVGILYDPERTGVMARQARAAAER
LGITLVEGVVRSPRDVPRTLSELAGKTDVLWLFPDATVLTREGQEAIFLFSQNSRVPVVAFAEKYLGTGALAALAIDPVD
LGRQAGRMARRIMDGVGVESVPAEGPARPTLKLNGSVARHLGIDPARLGE
>Mature_289_residues
TARIFHILALLLLWGFPAFAAEVVVVQGERNIPYEAAVRGFEGTAGVRTVERLVLSELRGADVVRTVREARPRLVLAVGR
EALIRVREIREIPVVYVMVASPESTGALGRNVTGVTMTVAPERYLTFIRDSIGGRRVGILYDPERTGVMARQARAAAERL
GITLVEGVVRSPRDVPRTLSELAGKTDVLWLFPDATVLTREGQEAIFLFSQNSRVPVVAFAEKYLGTGALAALAIDPVDL
GRQAGRMARRIMDGVGVESVPAEGPARPTLKLNGSVARHLGIDPARLGE

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31408; Mature: 31277

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARIFHILALLLLWGFPAFAAEVVVVQGERNIPYEAAVRGFEGTAGVRTVERLVLSELR
CCHHHHHHHHHHHHHCCHHHHEEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHC
GADVVRTVREARPRLVLAVGREALIRVREIREIPVVYVMVASPESTGALGRNVTGVTMTV
CHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEE
APERYLTFIRDSIGGRRVGILYDPERTGVMARQARAAAERLGITLVEGVVRSPRDVPRTL
CHHHHHHHHHHCCCCCEEEEEECCCHHCHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHH
SELAGKTDVLWLFPDATVLTREGQEAIFLFSQNSRVPVVAFAEKYLGTGALAALAIDPVD
HHHCCCCEEEEECCCCEEEECCCCEEEEEEECCCCCEEEEEHHHHCCCCHHHHEEECHHH
LGRQAGRMARRIMDGVGVESVPAEGPARPTLKLNGSVARHLGIDPARLGE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHCCCCHHHCCC
>Mature Secondary Structure 
TARIFHILALLLLWGFPAFAAEVVVVQGERNIPYEAAVRGFEGTAGVRTVERLVLSELR
CHHHHHHHHHHHHHCCHHHHEEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHC
GADVVRTVREARPRLVLAVGREALIRVREIREIPVVYVMVASPESTGALGRNVTGVTMTV
CHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEE
APERYLTFIRDSIGGRRVGILYDPERTGVMARQARAAAERLGITLVEGVVRSPRDVPRTL
CHHHHHHHHHHCCCCCEEEEEECCCHHCHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHH
SELAGKTDVLWLFPDATVLTREGQEAIFLFSQNSRVPVVAFAEKYLGTGALAALAIDPVD
HHHCCCCEEEEECCCCEEEECCCCEEEEEEECCCCCEEEEEHHHHCCCCHHHHEEECHHH
LGRQAGRMARRIMDGVGVESVPAEGPARPTLKLNGSVARHLGIDPARLGE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA