Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39995946

Identifier: 39995946

GI number: 39995946

Start: 896965

End: 897363

Strand: Reverse

Name: 39995946

Synonym: GSU0840

Alternate gene names: NA

Gene position: 897363-896965 (Counterclockwise)

Preceding gene: 39995947

Following gene: 39995943

Centisome position: 23.53

GC content: 60.15

Gene sequence:

>399_bases
ATGGATGTGCTTTTCTACGCCCCCGAAAGAGTTGGCGAGGATATTCGAAAAACGGTTTCGGGGGTTATTCCCGGCCTTGA
GGTGTATCGATCAATGGCAGCGCTCGCTGAACGGTTCCGGCGGATACTGGAGCAACCCGCGATCACCGTTCTGGTAGTTC
GGGACAGGGATGAGCTGGAACGCCTGCTTACCATGCGAACCGCTTTCCGGGACACAAAGACCGTCCTGGTTCTCCCCGAC
AGGCGAGCCGAGACGGTCTCCCGGGGGCACTGCCTGGAACCGCGATTCATGACGTACCTGGACCAGAACCCGGCGGAGGT
GGTTGCCGTGCTTGCCAGAATGGCGAGTCCGGGTAACGGACCCGGGAATCCTTCAAGGAGACAGGCATCGCTGCCGTAG

Upstream 100 bases:

>100_bases
TATCTATTTGATATTAATAGACAATCAACATCACGCCTTTCTGGCACAGGCCGTGCTTTAGCGTCATTGAATACTCAGAC
ACGGAGCGAGGTTATTGCCT

Downstream 100 bases:

>100_bases
CGGCTGCGGGAACGCACTGAAGGCGAGGAGGCCGGGATATGGAAGTGAACGACAGGGTGCGCACCGTTGATCCGTCCGGG
CCCGGAACCTGCTGGACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MDVLFYAPERVGEDIRKTVSGVIPGLEVYRSMAALAERFRRILEQPAITVLVVRDRDELERLLTMRTAFRDTKTVLVLPD
RRAETVSRGHCLEPRFMTYLDQNPAEVVAVLARMASPGNGPGNPSRRQASLP

Sequences:

>Translated_132_residues
MDVLFYAPERVGEDIRKTVSGVIPGLEVYRSMAALAERFRRILEQPAITVLVVRDRDELERLLTMRTAFRDTKTVLVLPD
RRAETVSRGHCLEPRFMTYLDQNPAEVVAVLARMASPGNGPGNPSRRQASLP
>Mature_132_residues
MDVLFYAPERVGEDIRKTVSGVIPGLEVYRSMAALAERFRRILEQPAITVLVVRDRDELERLLTMRTAFRDTKTVLVLPD
RRAETVSRGHCLEPRFMTYLDQNPAEVVAVLARMASPGNGPGNPSRRQASLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14863; Mature: 14863

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLFYAPERVGEDIRKTVSGVIPGLEVYRSMAALAERFRRILEQPAITVLVVRDRDELE
CCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH
RLLTMRTAFRDTKTVLVLPDRRAETVSRGHCLEPRFMTYLDQNPAEVVAVLARMASPGNG
HHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCC
PGNPSRRQASLP
CCCCCCCCCCCC
>Mature Secondary Structure
MDVLFYAPERVGEDIRKTVSGVIPGLEVYRSMAALAERFRRILEQPAITVLVVRDRDELE
CCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH
RLLTMRTAFRDTKTVLVLPDRRAETVSRGHCLEPRFMTYLDQNPAEVVAVLARMASPGNG
HHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCC
PGNPSRRQASLP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA