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The map label for this gene is ychE [C]

Identifier: 39995903

GI number: 39995903

Start: 855134

End: 855742

Strand: Reverse

Name: ychE [C]

Synonym: GSU0797

Alternate gene names: 39995903

Gene position: 855742-855134 (Counterclockwise)

Preceding gene: 39995904

Following gene: 39995902

Centisome position: 22.44

GC content: 66.01

Gene sequence:

>609_bases
ATGAGCATCTACGCCAACTTCTTCGTCGCTATCTGGCTCAAGTTCTTCTTTCTCCTGACCCCGTTCTTCGTGATGTCGGT
CTTCCTCTCCATGACCCAGGAGATCGCACCCCGGGACCGACGGCGGCTCGCCCTCAAGGTGACCGTGGCGGTGCTGGTCG
CCTGCTTCACCCTCTTCTTCTTCGGCAACCACCTCTTCTCCCTGTTCGGCATCACTATCGACTCGTTCCGGATCGGCGCC
GGCGCCCTCCTCTTCCTCTCCGCGGTGCAGATGGTCCAGGGTGATGCCGCCGTCTCCCCCAGCGACCGGCAGGGCGACAT
CTCCGTGGTGCCGCTGGCGATCCCCGTCACCGTGGGCCCCGCCACCACCGGTGCGCTCCTGGTCATGGGGGCCGAACTCC
AGGGGGCCTGGCAGACCGTGATCGGCTGCGCGGCCCTGGCCGCGGCAGTCCTCTGCATCGGGGCACTGCTGGGCTCCGCC
GCCTCCATCGAGCACGTGATCGGCAAGCGGGGAATCACCATCCTGAGCAAGCTGACCGGGCTCATGCTCGCCGCGCTGGC
GGCCCAGATCGTCTTCACGGGCATCAAGAGCTTTCTCGCCATCCACTGA

Upstream 100 bases:

>100_bases
GAAAAGGGGAACTTCCTGGCCGAGGGGACCCCCCAGGAATTCTTTGCCGAAGGGATGAACAACGAGCGGATCCAGTCGTT
CCTGAACCGGATTCTGTGAC

Downstream 100 bases:

>100_bases
CCACGCGAGGTACACATGACACACGCAACGGAAACGCACCATCGGGAATGGACCCTGATCGAAACCCTGCTCCCCCAGGA
CACCAACCCGGCGGGCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSIYANFFVAIWLKFFFLLTPFFVMSVFLSMTQEIAPRDRRRLALKVTVAVLVACFTLFFFGNHLFSLFGITIDSFRIGA
GALLFLSAVQMVQGDAAVSPSDRQGDISVVPLAIPVTVGPATTGALLVMGAELQGAWQTVIGCAALAAAVLCIGALLGSA
ASIEHVIGKRGITILSKLTGLMLAALAAQIVFTGIKSFLAIH

Sequences:

>Translated_202_residues
MSIYANFFVAIWLKFFFLLTPFFVMSVFLSMTQEIAPRDRRRLALKVTVAVLVACFTLFFFGNHLFSLFGITIDSFRIGA
GALLFLSAVQMVQGDAAVSPSDRQGDISVVPLAIPVTVGPATTGALLVMGAELQGAWQTVIGCAALAAAVLCIGALLGSA
ASIEHVIGKRGITILSKLTGLMLAALAAQIVFTGIKSFLAIH
>Mature_201_residues
SIYANFFVAIWLKFFFLLTPFFVMSVFLSMTQEIAPRDRRRLALKVTVAVLVACFTLFFFGNHLFSLFGITIDSFRIGAG
ALLFLSAVQMVQGDAAVSPSDRQGDISVVPLAIPVTVGPATTGALLVMGAELQGAWQTVIGCAALAAAVLCIGALLGSAA
SIEHVIGKRGITILSKLTGLMLAALAAQIVFTGIKSFLAIH

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=204, Percent_Identity=31.3725490196078, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1789842, Length=191, Percent_Identity=22.5130890052356, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787809, Length=195, Percent_Identity=25.6410256410256, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21355; Mature: 21224

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIYANFFVAIWLKFFFLLTPFFVMSVFLSMTQEIAPRDRRRLALKVTVAVLVACFTLFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FGNHLFSLFGITIDSFRIGAGALLFLSAVQMVQGDAAVSPSDRQGDISVVPLAIPVTVGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECC
ATTGALLVMGAELQGAWQTVIGCAALAAAVLCIGALLGSAASIEHVIGKRGITILSKLTG
CCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHH
LMLAALAAQIVFTGIKSFLAIH
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIYANFFVAIWLKFFFLLTPFFVMSVFLSMTQEIAPRDRRRLALKVTVAVLVACFTLFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FGNHLFSLFGITIDSFRIGAGALLFLSAVQMVQGDAAVSPSDRQGDISVVPLAIPVTVGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECC
ATTGALLVMGAELQGAWQTVIGCAALAAAVLCIGALLGSAASIEHVIGKRGITILSKLTG
CCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHH
LMLAALAAQIVFTGIKSFLAIH
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]