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The map label for this gene is hupD [H]

Identifier: 39995892

GI number: 39995892

Start: 847417

End: 847899

Strand: Direct

Name: hupD [H]

Synonym: GSU0786

Alternate gene names: 39995892

Gene position: 847417-847899 (Clockwise)

Preceding gene: 39995891

Following gene: 39995893

Centisome position: 22.22

GC content: 63.35

Gene sequence:

>483_bases
ATGAGAACCCTAATCTTCGGCGCCGGCAACCTGATCCTCACCGACGAGGGCTTCGGCGTCCACTGCATCAACCACCTGGA
AGAGAACTACGTATTCCCGCCCGAGGTGGAGCTGTACGACGGCGGCACCCTCGGGATCATGGTCACCCACAAGATCGAGG
AGGCCGACCGGGTCATCCTGGTGGATACGGTGGAGACCGCCGGCAATCCGGGCGAGGTCTTCCGCTTCGAAAAGGAAGAC
ATCATGCTCAACCGCCTGCCGGTCAAGCTGTCGCCGCACCAGATCGGCATCCAGGAGATGCTCTTCATCAGCGAGATGCG
CGGGGCCTGCCCGGACCGGATCAGTCTGCTGGGGGTCATCCCCTCTTCCCTGGACCCGGGGAGCGATCTCTCGCCGGTCC
TGAGCGAGTGTCTGCCCCGTGTGGCGGGACTTATCGTCGACGAACTGCGCTCCCTCGGACACGAGGTACACGCACGGAAC
TGA

Upstream 100 bases:

>100_bases
CCGTCCACACCATCGACCCGGCCGGCAAGGAGATCACCAAGGTCAAGGTCCTGTAACGGAAACCCGGGGGGGGCTTCAGC
CCCCCTCTATGGAGTAGCGA

Downstream 100 bases:

>100_bases
GCCGCCCCGCAGGGGCTCAGCATTACGCCGGACCCGGAGCCGGCGGGAGGAACGCACCATGTTTGGATTCGGAATGCCTG
AAATGATCATTATCCTCGTC

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRTLIFGAGNLILTDEGFGVHCINHLEENYVFPPEVELYDGGTLGIMVTHKIEEADRVILVDTVETAGNPGEVFRFEKED
IMLNRLPVKLSPHQIGIQEMLFISEMRGACPDRISLLGVIPSSLDPGSDLSPVLSECLPRVAGLIVDELRSLGHEVHARN

Sequences:

>Translated_160_residues
MRTLIFGAGNLILTDEGFGVHCINHLEENYVFPPEVELYDGGTLGIMVTHKIEEADRVILVDTVETAGNPGEVFRFEKED
IMLNRLPVKLSPHQIGIQEMLFISEMRGACPDRISLLGVIPSSLDPGSDLSPVLSECLPRVAGLIVDELRSLGHEVHARN
>Mature_160_residues
MRTLIFGAGNLILTDEGFGVHCINHLEENYVFPPEVELYDGGTLGIMVTHKIEEADRVILVDTVETAGNPGEVFRFEKED
IMLNRLPVKLSPHQIGIQEMLFISEMRGACPDRISLLGVIPSSLDPGSDLSPVLSECLPRVAGLIVDELRSLGHEVHARN

Specific function: Not known. Could be involved in the processing of hydrogenase [H]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A31 family [H]

Homologues:

Organism=Escherichia coli, GI1789367, Length=160, Percent_Identity=33.75, Blast_Score=96, Evalue=9e-22,
Organism=Escherichia coli, GI1787209, Length=139, Percent_Identity=35.2517985611511, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004419
- InterPro:   IPR000671 [H]

Pfam domain/function: PF01750 HycI [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 17615; Mature: 17615

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLIFGAGNLILTDEGFGVHCINHLEENYVFPPEVELYDGGTLGIMVTHKIEEADRVIL
CCEEEEECCCEEEECCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEEEEEEECCCCCEEE
VDTVETAGNPGEVFRFEKEDIMLNRLPVKLSPHQIGIQEMLFISEMRGACPDRISLLGVI
EEECCCCCCCCCEEEECCCCEEEECCCCEECCHHHCHHHHHHHHHHCCCCCCCEEEEEEC
PSSLDPGSDLSPVLSECLPRVAGLIVDELRSLGHEVHARN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTLIFGAGNLILTDEGFGVHCINHLEENYVFPPEVELYDGGTLGIMVTHKIEEADRVIL
CCEEEEECCCEEEECCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEEEEEEECCCCCEEE
VDTVETAGNPGEVFRFEKEDIMLNRLPVKLSPHQIGIQEMLFISEMRGACPDRISLLGVI
EEECCCCCCCCCEEEECCCCEEEECCCCEECCHHHCHHHHHHHHHHCCCCCCCEEEEEEC
PSSLDPGSDLSPVLSECLPRVAGLIVDELRSLGHEVHARN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]