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The map label for this gene is 39995873

Identifier: 39995873

GI number: 39995873

Start: 823097

End: 823771

Strand: Direct

Name: 39995873

Synonym: GSU0767

Alternate gene names: NA

Gene position: 823097-823771 (Clockwise)

Preceding gene: 39995871

Following gene: 39995874

Centisome position: 21.58

GC content: 62.67

Gene sequence:

>675_bases
ATGAAAAAACACACGATTGCCATTGCCGCCTTTGCGCTCTGCACCCTGCCCGCCGTGGCGGGCGCCACTCCGGCTCGGCC
GGGGGGATACGTCTCGGGCTTCTTCGGGGTAAGCGCCGCGTCGGATGCCGATGTGACGAGTATCGACAATCAGTTCGGCG
ACGTCTTCAACGACCGGGTGGAGTATGACCCGAACATCTACGTGGGCGGTACCGGCGGGTATGACTTCGGCCACTTCCGG
CTGGAGGGGGAACTCTCGTACAAGCATGCGGAGATCAGTTCGATCACCGACGATACCGGCTTCCGGTTCCGGGGGGTGGA
CGGCAACCTCGGCGCCCTGGCGTTCATGGCCAACGCCTTTGTGGATCTGCACAACAATACGCCGGTCACCCCCTACTTCG
GGGGAGGCATCGGCTTTGCCGTGCTGAGCCTGAGCGACACGTACGGCAGCGACACCTCGGGCCGGCTGCTCCTCTACCCG
GAGGACGATACCACGGTGTTCGCCTACCAGGCGGGCGGCGGTGTTGAGATCGCCATCAATCCGAGCCTGTCCCTTGACCT
GGGATACCGCTACTTCGGCACCACCAAGGGGACCTTCGATTCCGACTGGATCACCACGACCAAACTGAAGTACGAGAGCC
ACAACGGCATGGTGGGGTTCCGGGTCAAGTTCTGA

Upstream 100 bases:

>100_bases
GGGGGGCGCTCCCGTCCGGGTTTCATTTCAAGCGAATAGGGGTACACTGTTACCAGTGCCGCGAGCCCTGACATTCGCAC
TCTCTGAAGGAGGAACAGTC

Downstream 100 bases:

>100_bases
GCCGGGGCACCCGTTTCTTTTTGCCCGTTGTTGTGCTACACATCATCCCGTGCTGATTGGTGCACGGCCCGTGACCGGGG
CGATTTCGAGCGGATGGTGT

Product: tia invasion determinant-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKKHTIAIAAFALCTLPAVAGATPARPGGYVSGFFGVSAASDADVTSIDNQFGDVFNDRVEYDPNIYVGGTGGYDFGHFR
LEGELSYKHAEISSITDDTGFRFRGVDGNLGALAFMANAFVDLHNNTPVTPYFGGGIGFAVLSLSDTYGSDTSGRLLLYP
EDDTTVFAYQAGGGVEIAINPSLSLDLGYRYFGTTKGTFDSDWITTTKLKYESHNGMVGFRVKF

Sequences:

>Translated_224_residues
MKKHTIAIAAFALCTLPAVAGATPARPGGYVSGFFGVSAASDADVTSIDNQFGDVFNDRVEYDPNIYVGGTGGYDFGHFR
LEGELSYKHAEISSITDDTGFRFRGVDGNLGALAFMANAFVDLHNNTPVTPYFGGGIGFAVLSLSDTYGSDTSGRLLLYP
EDDTTVFAYQAGGGVEIAINPSLSLDLGYRYFGTTKGTFDSDWITTTKLKYESHNGMVGFRVKF
>Mature_224_residues
MKKHTIAIAAFALCTLPAVAGATPARPGGYVSGFFGVSAASDADVTSIDNQFGDVFNDRVEYDPNIYVGGTGGYDFGHFR
LEGELSYKHAEISSITDDTGFRFRGVDGNLGALAFMANAFVDLHNNTPVTPYFGGGIGFAVLSLSDTYGSDTSGRLLLYP
EDDTTVFAYQAGGGVEIAINPSLSLDLGYRYFGTTKGTFDSDWITTTKLKYESHNGMVGFRVKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opacity porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR003394 [H]

Pfam domain/function: PF02462 Opacity [H]

EC number: NA

Molecular weight: Translated: 23966; Mature: 23966

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHTIAIAAFALCTLPAVAGATPARPGGYVSGFFGVSAASDADVTSIDNQFGDVFNDRV
CCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
EYDPNIYVGGTGGYDFGHFRLEGELSYKHAEISSITDDTGFRFRGVDGNLGALAFMANAF
CCCCCEEECCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCEEECCCCCCHHHHEEEEEE
VDLHNNTPVTPYFGGGIGFAVLSLSDTYGSDTSGRLLLYPEDDTTVFAYQAGGGVEIAIN
EEECCCCCCCEEECCCEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEC
PSLSLDLGYRYFGTTKGTFDSDWITTTKLKYESHNGMVGFRVKF
CCEEEEECEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEC
>Mature Secondary Structure
MKKHTIAIAAFALCTLPAVAGATPARPGGYVSGFFGVSAASDADVTSIDNQFGDVFNDRV
CCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
EYDPNIYVGGTGGYDFGHFRLEGELSYKHAEISSITDDTGFRFRGVDGNLGALAFMANAF
CCCCCEEECCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCEEECCCCCCHHHHEEEEEE
VDLHNNTPVTPYFGGGIGFAVLSLSDTYGSDTSGRLLLYPEDDTTVFAYQAGGGVEIAIN
EEECCCCCCCEEECCCEEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEC
PSLSLDLGYRYFGTTKGTFDSDWITTTKLKYESHNGMVGFRVKF
CCEEEEECEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]