| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995865
Identifier: 39995865
GI number: 39995865
Start: 809874
End: 811532
Strand: Reverse
Name: 39995865
Synonym: GSU0759
Alternate gene names: NA
Gene position: 811532-809874 (Counterclockwise)
Preceding gene: 39995867
Following gene: 39995863
Centisome position: 21.28
GC content: 58.11
Gene sequence:
>1659_bases ATGAGCAGAATCATTCCATTGATTGTTGGCGCGGTTCTCTTTTGTTTTTCAGCGGCCAGCTACGCGTTGCCGGCTCAACT ACCGTTGAGCAAGGATCTTACGGTCCGGCTTTCAGCCCTCAGCGCCCAGGGAGAGTTGCAGACAGTGGCCGAGGTGGTGG CCAGGACCGACGCGCTCGGCAAGATAGCCTTTGATTTTTCGACGGTTCCATCTTCGGCAACGACACCGTTCCTGCATATC CGGATCATGGACGGCGAGAATGTGTTGCGGCAGGCGATCGTGCCGAGCCCGCAACCCGGCGGGACCGTTGATGCGGGCGT GAGCGAAGTGACCGATCTGCAGGCGCGGGCACTGCTGAAGGCCACGGCCCTGTCGGGCAGGCTGACGCCGGTGCATATGC TGGTTGCCCATACGCTTCTGCGAACGCCCACGATCAGCACAACGGATGCCGAAGCCATAGGTTCCGCCATTGTGGCCGGC GCCGATGCCCTGTTCGCTGTTCTGGCAACGGATGGCCTGAGCTCCGAGCAGCATGCCGCATTTCTGGGGTCACTAAGAAA CGGACTGGCCGATGCCGCAGGGATTTATCGCAAATCGGTCGATGATTCGATCGTGTTCGATCAGAACGTCGAGGCATACC GGCGGGGCGAGGCGTATGCGGTACTCCTGCAGTCGTTGATCGACGCCGGCATTGATGCGGGAATAAACCTGGAAACCGTC TCAACTGCTTTTGCGGCGGCCGGAGCGGCAACAGAGGCGACACTGGAGAGCAATCTCGCTGTCGGGGCTGTTGCGAGGGC AGGCATGCGGCTGGGGTATGTCACCGGCATGTTGAGTCTGAGCAATTACAGGTCGATTCGGGAACTGGTTGCCGGCTTCA GACATGCCGGTTTTTCGCCGCCGAGGTTTTCCAGACTCCATTCCGTATTCGATCTGGTGTGGCAGGACACAACCACCAGC CTTAAGGCAGCGGATCGTGACCTGCTGGCAAGCTCATCGGAAAACGACCTCCAAGGATTGAGAATCCAGGAATTCAATGC CGCAGCAAGGCGGGATGTGCAGATGCTGAAGCTTGCGCTTGAAAGTTATGATCTTCGCACAATTCCGGAGTCTGTTGAGC TCATGCTGGAAATCACTTCGCGCATGGCGGGCCAGGGTGGGGTAATGGCCGGAATGACTCCTGAACACCTGATGGAAATT CTTGGGAGATCGACATCGGCATCTCCGGAGTCGCCCCCCGTGCCGGTTGACGTGCCAACCCTGACGCCCTACGAGTTGGC GGCCTGGGCATATATTCACACGGAGCCCGGGTTTGCGTATACCCCGATTGCGGGACTCATCGACCAGCTTGAGAGCAAGC CGACGGCCCCCCCTCAGTTCGACAAACTGGCAGAGCCCTACAAATCCCTGGCATTGTTGACGTACGATCTTATTTTGATC AGCAGATTGTATTGGCAGGAACAACAGAATGCCGAAACCGCCCTTGAGGCGAACCAAACGGATCCGCCACGCTGGCACCC CCTTGCCACTATTCGGCAGATATCTGAAAACAATCGCCAACGATTGGCCCTGGCCCGCCGGCATATATCCGGCGTTTCAC CGGAAGCGAAAGACGCCTTGATCTATCTGGTACATGCGAACCGGTTCGTCAGGTTTTAG
Upstream 100 bases:
>100_bases CATGTGCGGCTGTGGCGGAAGTGGAAGCTCCGGCAACGGCAACAGCAAGGGTACCGGCAGCCTGACCGGCAGCGGCAAAT AGAAGGGATGGGGCAGTGTA
Downstream 100 bases:
>100_bases TCGTACCGTGAGGAGTGACCCGACGGGATGCTCTTTTCTATTTATCTAAAGGCGCAAAAGAAAAATAAACATGAATATCC CCTCGCGAAGGTTCGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MSRIIPLIVGAVLFCFSAASYALPAQLPLSKDLTVRLSALSAQGELQTVAEVVARTDALGKIAFDFSTVPSSATTPFLHI RIMDGENVLRQAIVPSPQPGGTVDAGVSEVTDLQARALLKATALSGRLTPVHMLVAHTLLRTPTISTTDAEAIGSAIVAG ADALFAVLATDGLSSEQHAAFLGSLRNGLADAAGIYRKSVDDSIVFDQNVEAYRRGEAYAVLLQSLIDAGIDAGINLETV STAFAAAGAATEATLESNLAVGAVARAGMRLGYVTGMLSLSNYRSIRELVAGFRHAGFSPPRFSRLHSVFDLVWQDTTTS LKAADRDLLASSSENDLQGLRIQEFNAAARRDVQMLKLALESYDLRTIPESVELMLEITSRMAGQGGVMAGMTPEHLMEI LGRSTSASPESPPVPVDVPTLTPYELAAWAYIHTEPGFAYTPIAGLIDQLESKPTAPPQFDKLAEPYKSLALLTYDLILI SRLYWQEQQNAETALEANQTDPPRWHPLATIRQISENNRQRLALARRHISGVSPEAKDALIYLVHANRFVRF
Sequences:
>Translated_552_residues MSRIIPLIVGAVLFCFSAASYALPAQLPLSKDLTVRLSALSAQGELQTVAEVVARTDALGKIAFDFSTVPSSATTPFLHI RIMDGENVLRQAIVPSPQPGGTVDAGVSEVTDLQARALLKATALSGRLTPVHMLVAHTLLRTPTISTTDAEAIGSAIVAG ADALFAVLATDGLSSEQHAAFLGSLRNGLADAAGIYRKSVDDSIVFDQNVEAYRRGEAYAVLLQSLIDAGIDAGINLETV STAFAAAGAATEATLESNLAVGAVARAGMRLGYVTGMLSLSNYRSIRELVAGFRHAGFSPPRFSRLHSVFDLVWQDTTTS LKAADRDLLASSSENDLQGLRIQEFNAAARRDVQMLKLALESYDLRTIPESVELMLEITSRMAGQGGVMAGMTPEHLMEI LGRSTSASPESPPVPVDVPTLTPYELAAWAYIHTEPGFAYTPIAGLIDQLESKPTAPPQFDKLAEPYKSLALLTYDLILI SRLYWQEQQNAETALEANQTDPPRWHPLATIRQISENNRQRLALARRHISGVSPEAKDALIYLVHANRFVRF >Mature_551_residues SRIIPLIVGAVLFCFSAASYALPAQLPLSKDLTVRLSALSAQGELQTVAEVVARTDALGKIAFDFSTVPSSATTPFLHIR IMDGENVLRQAIVPSPQPGGTVDAGVSEVTDLQARALLKATALSGRLTPVHMLVAHTLLRTPTISTTDAEAIGSAIVAGA DALFAVLATDGLSSEQHAAFLGSLRNGLADAAGIYRKSVDDSIVFDQNVEAYRRGEAYAVLLQSLIDAGIDAGINLETVS TAFAAAGAATEATLESNLAVGAVARAGMRLGYVTGMLSLSNYRSIRELVAGFRHAGFSPPRFSRLHSVFDLVWQDTTTSL KAADRDLLASSSENDLQGLRIQEFNAAARRDVQMLKLALESYDLRTIPESVELMLEITSRMAGQGGVMAGMTPEHLMEIL GRSTSASPESPPVPVDVPTLTPYELAAWAYIHTEPGFAYTPIAGLIDQLESKPTAPPQFDKLAEPYKSLALLTYDLILIS RLYWQEQQNAETALEANQTDPPRWHPLATIRQISENNRQRLALARRHISGVSPEAKDALIYLVHANRFVRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59372; Mature: 59241
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIIPLIVGAVLFCFSAASYALPAQLPLSKDLTVRLSALSAQGELQTVAEVVARTDALG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH KIAFDFSTVPSSATTPFLHIRIMDGENVLRQAIVPSPQPGGTVDAGVSEVTDLQARALLK HEEEECCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH ATALSGRLTPVHMLVAHTLLRTPTISTTDAEAIGSAIVAGADALFAVLATDGLSSEQHAA HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FLGSLRNGLADAAGIYRKSVDDSIVFDQNVEAYRRGEAYAVLLQSLIDAGIDAGINLETV HHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHH STAFAAAGAATEATLESNLAVGAVARAGMRLGYVTGMLSLSNYRSIRELVAGFRHAGFSP HHHHHHCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PRFSRLHSVFDLVWQDTTTSLKAADRDLLASSSENDLQGLRIQEFNAAARRDVQMLKLAL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH ESYDLRTIPESVELMLEITSRMAGQGGVMAGMTPEHLMEILGRSTSASPESPPVPVDVPT HHCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC LTPYELAAWAYIHTEPGFAYTPIAGLIDQLESKPTAPPQFDKLAEPYKSLALLTYDLILI CCCHHHHEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SRLYWQEQQNAETALEANQTDPPRWHPLATIRQISENNRQRLALARRHISGVSPEAKDAL HHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEE IYLVHANRFVRF EEEEECCCHHCC >Mature Secondary Structure SRIIPLIVGAVLFCFSAASYALPAQLPLSKDLTVRLSALSAQGELQTVAEVVARTDALG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH KIAFDFSTVPSSATTPFLHIRIMDGENVLRQAIVPSPQPGGTVDAGVSEVTDLQARALLK HEEEECCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH ATALSGRLTPVHMLVAHTLLRTPTISTTDAEAIGSAIVAGADALFAVLATDGLSSEQHAA HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FLGSLRNGLADAAGIYRKSVDDSIVFDQNVEAYRRGEAYAVLLQSLIDAGIDAGINLETV HHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHH STAFAAAGAATEATLESNLAVGAVARAGMRLGYVTGMLSLSNYRSIRELVAGFRHAGFSP HHHHHHCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PRFSRLHSVFDLVWQDTTTSLKAADRDLLASSSENDLQGLRIQEFNAAARRDVQMLKLAL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH ESYDLRTIPESVELMLEITSRMAGQGGVMAGMTPEHLMEILGRSTSASPESPPVPVDVPT HHCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC LTPYELAAWAYIHTEPGFAYTPIAGLIDQLESKPTAPPQFDKLAEPYKSLALLTYDLILI CCCHHHHEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SRLYWQEQQNAETALEANQTDPPRWHPLATIRQISENNRQRLALARRHISGVSPEAKDAL HHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEE IYLVHANRFVRF EEEEECCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA